Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88965
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:17487541:17491465:-1 gene:SORBI_3002G127100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACGCGCAGCGAGCCCTCCTTGACGAGCTCATGGGCACAGCTCGCAATCTAACGGAT
GAGGAGAAGAAGGGGCACAAGGAGCTGAAGTGGGACGATCCGGACGTGTGCGGCCCCTAC
ATGGTCCGGTTCTGTCCCCACGACCTCTTCGTCAACACCAAGAGCAATCTCGGGCCGTGC
TCGAGGATCCATGATCTGAAGCTCAAGGAAAGCTTTGAGAAGTCTCCCAGGCATGATACT
TATATGCGACGGTTTGAGGCAGAGCTTGCACAACAATGTGAGAAATTGGTGATGGATTTG
GATAGAAAGATAAGGCGTGGTCGAGAAAGGTTGGCTCATGATTCTGCTGTGCCAATGCCA
ATCCCTGGAAAAATAGCTGAGCAGCTTTCAGTGCGAGAAGAACAGGTCAAGAAGCTGCTG
GAGCAAATCGAGGAGCTTGGTGAGGCTGGTAAAGTGGATGAAGCTGAGGCACTTATGAGA
AGGGTTGACATTCTAAATGCTGAGAAGACAGCTTTAGCTAACCAAGCAGACAACAAAGTG
GCTATGCTTGAGAAGAAGATGGAACTTTGCGAAACATGTGGATCATTCTTAGTTTCTGAT
GATGCTCTTGAGAGAACGCAGTCCCACGTGACTGGGAAACAACACATTGGTTACGGTATG
GTTAGAGATTTCCTGGTGGAATACAAGGCGGCAAAAGAGAAGACAAAAGAGGAAGAGAGG
CTCGCAAGGGAGCAGAAAGCAGAGGAGCGTCAGAAACAGAGGGGAAAAGAGTATGATAGT
GGGGGCAGGGATAGAGATACCAGAAGGGAGAGATCTGGGGAGCGTGACTATGACCGTGAT
CGTCAATATGAGCGAAGCCGTGGAAGAGACAGGTCCTATGATTACAGACAGAGAGGATCA
GAGCACCGAAGCAATCCCTACTACAGAAATGGGAGGGATTCTGAAAGAGGCGGACACAGA
TACAGGAGTGGTGATATGACAAGCGAACGAGGGAGAATGAGGAGCAGATCACGTTCTCCA
ACCAGACATGGCTATGGAAGATCTAGAAGTCCAGATCATTAG

Peptide Sequence

PEP ID

OQU88965
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:17487541:17491465:-1 gene:SORBI_3002G127100 transcript:OQU88965 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDAQRALLDELMGTARNLTDEEKKGHKELKWDDPDVCGPYMVRFCPHDLFVNTKSNLGPC
SRIHDLKLKESFEKSPRHDTYMRRFEAELAQQCEKLVMDLDRKIRRGRERLAHDSAVPMP
IPGKIAEQLSVREEQVKKLLEQIEELGEAGKVDEAEALMRRVDILNAEKTALANQADNKV
AMLEKKMELCETCGSFLVSDDALERTQSHVTGKQHIGYGMVRDFLVEYKAAKEKTKEEER
LAREQKAEERQKQRGKEYDSGGRDRDTRRERSGERDYDRDRQYERSRGRDRSYDYRQRGS
EHRSNPYYRNGRDSERGGHRYRSGDMTSERGRMRSRSRSPTRHGYGRSRSPDH

Transcript Sequence

Transcript ID

OQU88965
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:17487541:17491465:-1 gene:SORBI_3002G127100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTTCTCTCCCTTGTCTCTTCCTAGTTACTACTAGGACGAACCCAAATCCAAACCCACCTG
AGTATAGGGGAAAGTGAAGGAAGAGGGCCGCCAGGCTTAGGGTTTCTCGACGCCTCCTTC
CTCTCTCCGCCATGGACGCGCAGCGAGCCCTCCTTGACGAGCTCATGGGCACAGCTCGCA
ATCTAACGGATGAGGAGAAGAAGGGGCACAAGGAGCTGAAGTGGGACGATCCGGACGTGT
GCGGCCCCTACATGGTCCGGTTCTGTCCCCACGACCTCTTCGTCAACACCAAGAGCAATC
TCGGGCCGTGCTCGAGGATCCATGATCTGAAGCTCAAGGAAAGCTTTGAGAAGTCTCCCA
GGCATGATACTTATATGCGACGGTTTGAGGCAGAGCTTGCACAACAATGTGAGAAATTGG
TGATGGATTTGGATAGAAAGATAAGGCGTGGTCGAGAAAGGTTGGCTCATGATTCTGCTG
TGCCAATGCCAATCCCTGGAAAAATAGCTGAGCAGCTTTCAGTGCGAGAAGAACAGGTCA
AGAAGCTGCTGGAGCAAATCGAGGAGCTTGGTGAGGCTGGTAAAGTGGATGAAGCTGAGG
CACTTATGAGAAGGGTTGACATTCTAAATGCTGAGAAGACAGCTTTAGCTAACCAAGCAG
ACAACAAAGTGGCTATGCTTGAGAAGAAGATGGAACTTTGCGAAACATGTGGATCATTCT
TAGTTTCTGATGATGCTCTTGAGAGAACGCAGTCCCACGTGACTGGGAAACAACACATTG
GTTACGGTATGGTTAGAGATTTCCTGGTGGAATACAAGGCGGCAAAAGAGAAGACAAAAG
AGGAAGAGAGGCTCGCAAGGGAGCAGAAAGCAGAGGAGCGTCAGAAACAGAGGGGAAAAG
AGTATGATAGTGGGGGCAGGGATAGAGATACCAGAAGGGAGAGATCTGGGGAGCGTGACT
ATGACCGTGATCGTCAATATGAGCGAAGCCGTGGAAGAGACAGGTCCTATGATTACAGAC
AGAGAGGATCAGAGCACCGAAGCAATCCCTACTACAGAAATGGGAGGGATTCTGAAAGAG
GCGGACACAGATACAGGAGTGGTGATATGACAAGCGAACGAGGGAGAATGAGGAGCAGAT
CACGTTCTCCAACCAGACATGGCTATGGAAGATCTAGAAGTCCAGATCATTAGCTGAACA
TTTAGATAGTTTTATTCACAGTTGGGACTCATGAGGTAGACCGTTCCCTTCTGCTATTTA
TTACTGTACAATGGGTTTTATTGCAGTGTCGCACCTGTTTAAGTTTCTGCTCTGCTGTAA
CAGCTCTGTTGGAACCCTACAGACTTCCTTTTTTACATGGGAAAAAAAAATTCTCAGGTA
GGTATCCATTGTCATTCCCACAATTTTTGTGCTTCTGATATTCTATATGTATGCTGAAGC
TTTGTTTCGATATTTGGAATCAAAAGTTAAGTTAGTAAGGCCGGTACTGGACTTCATATA
TGGATGATGATGTTTACAGCCTAGAGCAGGTAAACCTTGAACATCAATGTTTCATGTTAC
ACACTTTTTATTTCCCTTGAACTCTGCTAGAAACCTTAGTTGTGCTCTTTGGCTTAGATT
TTTACACTGCTCAGGCCAGGTATCTTTTTCTAACAAAATTTATGTGCATAATTACGAGTT
ATGTACCTTTAATAGTTGACTAGTTGTCAATTTGTCATGAAGTAGTATTGTATTCAGGAA
GAACAATCAGACAAATTGATCCACCGTCATTGCCAATCATCAACAATTTCTTTTTCTGGA
ACCGTTGTAGTGTACAAGAGATCAAGCTTTGCTTTGTAGGTTAGAACCACCAGGATTGGG
CCTATTTCCTGACTGTCTAGTTAGTGGCTCGAAGTCTAGTTTAGAGAAGTTCTGTTTCCA
TGCCAAAATATTAGATAACTTTGCAGTTGTGGAATCCTGTAATTGGTGTGCTGTTTGAGC
AGAGTGTATTTTAACTATGCAAACTAATAGATGATTGGCTTCAGTGTTTTTGAC