Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88850
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:12466620:12471380:1 gene:SORBI_3002G105200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATGAAACAGATATTTGGGCGGCGCAAGTCCAAAACCGCAGACAAGGAATTCACTGGC
GGGAGGACGTTCAACCAGCTGTCGGGGTCTGGAGCTGCTAACCTGAGTGGCCAGCCGCCG
TTTCTGTCGGGTACTGGGAACACCTATGGGAGTGGAAACCGTACTGGGTTCCAAGACTCC
AGGATAAATGATACTAACTTCCGACCGTTGCCGAGCTTTAAGGATGTGCCCAATGCAGAG
AAACAGAACCTGCTCATCAAAAAGCTGAACATGTGCTGCACTCTGTTTGACTTTATGGAT
GCCGCAAAGAACATAAAGGAGAAGGAAATCAAGACGCTAATGTTGTTGGAGATAGATGAG
TATGTCAGGACTGCTACCGTGAAGTTCCCTGAGATTGTTGTGGAGGCAATCACAAAAATG
ATCTCAGTGAACTTGTTCAGGACACTAATTTCCCCACCCAGGGAGAAGAAGGTGCTTCGA
GCTTTTGATCTAGAAGAGGATGAACCATTGATGGACCCTGCATGGCCACACTTGTACCAT
GTGTATGAGTTGCTCTTGACATTTGTTCAGTCTCCAGAAAATGATGCTAAACTGGCTAAG
AGATATATTGACAATTCCTTTATTCTAAGGCTGCTTGAGCTCTTTGACTCCGAGGATGCT
AGGGAGAGGGATCGCCTCAAGACTGTACTTCACCGTATCTATGGGAAGTTCATGGTGTAT
CGGCCATTTATCCGGAAAGCTATCAATAACATATTCTACCAGTTCATATATGAAACAGAA
AAACACAATGGAATTGCAGAGCTCTTGGAGATTTTTGGAAGTATCATCAACGGGTTTGCT
TTGCCACTCAAGGAAGAGCACAAACTGTTCCTTGTAAGGACCTTAATCCCACTTCACAAG
CCAAGGTGCACTACAGTGTACCATCGACAGTTGTCTTACTGCATTACACAGTTTGTTGAG
AAAGATTGCAAGCTTGCGGATACTGTTATTAGGGGCCTCATAAAATATTGGCCAATCACC
AACAGCACAAAGGAGGTACTGTTCTTGGGTGAGTTGGAAGAGATACTAGATGCAACACAG
CCTGCTGAATTTCAAAAATGTATGGTTCCTCTTTCTCACCAAATTGCTCGCTGCTTGAAC
AGCTCTCACTTCCAGGTTGCTGAGAGAGTATTGTTTTTCTGGAACAATTCTCACTTTGAG
AATTTCGTTAAGCAAAACAGTAAGGTGATCCTGCCTATCATCTTCCCTGCATTGGAGAAA
AATATAAATGGGCACTGGAATCAAGTCGTGCAAAGTCTCAGTCTGAATGTCCGAAAGATA
TTCTCCGATCGCGACCCTCAATTGTTTACTGAATGCTTGAGGAAATATGAGGAGGACAAA
GACAGAGAGAAGGAATTCAAACTGAAGCAAGAGTTGGCATGGAAACGTCTAGATGAGATT
GCATCAGCAAAAATCACAAGTGGTGAGGCTGTCCTCGTGTCTCCAACCTTGCCTCGTCAA
CCTTCAGTCTTGTAG

Peptide Sequence

PEP ID

OQU88850
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:12466620:12471380:1 gene:SORBI_3002G105200 transcript:OQU88850 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MMKQIFGRRKSKTADKEFTGGRTFNQLSGSGAANLSGQPPFLSGTGNTYGSGNRTGFQDS
RINDTNFRPLPSFKDVPNAEKQNLLIKKLNMCCTLFDFMDAAKNIKEKEIKTLMLLEIDE
YVRTATVKFPEIVVEAITKMISVNLFRTLISPPREKKVLRAFDLEEDEPLMDPAWPHLYH
VYELLLTFVQSPENDAKLAKRYIDNSFILRLLELFDSEDARERDRLKTVLHRIYGKFMVY
RPFIRKAINNIFYQFIYETEKHNGIAELLEIFGSIINGFALPLKEEHKLFLVRTLIPLHK
PRCTTVYHRQLSYCITQFVEKDCKLADTVIRGLIKYWPITNSTKEVLFLGELEEILDATQ
PAEFQKCMVPLSHQIARCLNSSHFQVAERVLFFWNNSHFENFVKQNSKVILPIIFPALEK
NINGHWNQVVQSLSLNVRKIFSDRDPQLFTECLRKYEEDKDREKEFKLKQELAWKRLDEI
ASAKITSGEAVLVSPTLPRQPSVL

Transcript Sequence

Transcript ID

OQU88850
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:12466620:12471380:1 gene:SORBI_3002G105200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAAACCTATAAACGTTCTAGGTTGCCCCCCCCTGCAAAATGCCTTGGTACTAATATAATT
CCTGCTTAGTGTTTGGCCTGCCTGAAAATTGTTCATCCTGTTTGCTGACCCCCTATTTCC
CCGCTGTTGCAGGTTGTTGGAGTGGCTCGATTTGTCAGGACAACTTGCATAATTGAAGCT
TTCCTTTGTATGATGATGATGGGGGCATGCCGTGGACCACAAGTGAGGGGGTTAGGGTTT
GGTATGCGGTAGTAGCTCCTGCTTGAGCAAAAGAAGCAAGTATCGCTTAGCTTCTTTTGT
CGCTTGTTACACGGAGGATCTGAATCCTGTCGGGTTGGTTTGGGTGGCGTCAGCTGTTCC
GGGTGGGGGTAGTATGATGAAACAGATATTTGGGCGGCGCAAGTCCAAAACCGCAGACAA
GGAATTCACTGGCGGGAGGACGTTCAACCAGCTGTCGGGGTCTGGAGCTGCTAACCTGAG
TGGCCAGCCGCCGTTTCTGTCGGGTACTGGGAACACCTATGGGAGTGGAAACCGTACTGG
GTTCCAAGACTCCAGGATAAATGATACTAACTTCCGACCGTTGCCGAGCTTTAAGGATGT
GCCCAATGCAGAGAAACAGAACCTGCTCATCAAAAAGCTGAACATGTGCTGCACTCTGTT
TGACTTTATGGATGCCGCAAAGAACATAAAGGAGAAGGAAATCAAGACGCTAATGTTGTT
GGAGATAGATGAGTATGTCAGGACTGCTACCGTGAAGTTCCCTGAGATTGTTGTGGAGGC
AATCACAAAAATGATCTCAGTGAACTTGTTCAGGACACTAATTTCCCCACCCAGGGAGAA
GAAGGTGCTTCGAGCTTTTGATCTAGAAGAGGATGAACCATTGATGGACCCTGCATGGCC
ACACTTGTACCATGTGTATGAGTTGCTCTTGACATTTGTTCAGTCTCCAGAAAATGATGC
TAAACTGGCTAAGAGATATATTGACAATTCCTTTATTCTAAGGCTGCTTGAGCTCTTTGA
CTCCGAGGATGCTAGGGAGAGGGATCGCCTCAAGACTGTACTTCACCGTATCTATGGGAA
GTTCATGGTGTATCGGCCATTTATCCGGAAAGCTATCAATAACATATTCTACCAGTTCAT
ATATGAAACAGAAAAACACAATGGAATTGCAGAGCTCTTGGAGATTTTTGGAAGTATCAT
CAACGGGTTTGCTTTGCCACTCAAGGAAGAGCACAAACTGTTCCTTGTAAGGACCTTAAT
CCCACTTCACAAGCCAAGGTGCACTACAGTGTACCATCGACAGTTGTCTTACTGCATTAC
ACAGTTTGTTGAGAAAGATTGCAAGCTTGCGGATACTGTTATTAGGGGCCTCATAAAATA
TTGGCCAATCACCAACAGCACAAAGGAGGTACTGTTCTTGGGTGAGTTGGAAGAGATACT
AGATGCAACACAGCCTGCTGAATTTCAAAAATGTATGGTTCCTCTTTCTCACCAAATTGC
TCGCTGCTTGAACAGCTCTCACTTCCAGGTTGCTGAGAGAGTATTGTTTTTCTGGAACAA
TTCTCACTTTGAGAATTTCGTTAAGCAAAACAGTAAGGTGATCCTGCCTATCATCTTCCC
TGCATTGGAGAAAAATATAAATGGGCACTGGAATCAAGTCGTGCAAAGTCTCAGTCTGAA
TGTCCGAAAGATATTCTCCGATCGCGACCCTCAATTGTTTACTGAATGCTTGAGGAAATA
TGAGGAGGACAAAGACAGAGAGAAGGAATTCAAACTGAAGCAAGAGTTGGCATGGAAACG
TCTAGATGAGATTGCATCAGCAAAAATCACAAGTGGTGAGGCTGTCCTCGTGTCTCCAAC
CTTGCCTCGTCAACCTTCAGTCTTGTAGGAACCTGCACTACATGAGTGGTACGCAAGTTT
ATTGTCTTTTGTTCGATTGATTGATTCAGTTATTTGTTGATCTCCTGCAGTTTTGGTAAT
ACTTGGGTTATTGGTATTTCCAGGTCCTTGCAGAGTCGTTAGACATTGTACAGGATTGGG
TTGTAGATAAAAAGGGGGTATATGAAGCCACCAAGGCTGGTGTGCGAAACTGAGGAAAGA
GATATGAGAGGCCAATTGTGCATCATTTCTGTAAATCCCATGCCATGGCTTCTTTTGGCA
TCCTGGTGGTTCACTTTGCTGCTGTAGTCCGTTGTTTGGGAGATTGGATGTTTTTTTTTC
TTCTTATAATAGAAAATGTCGAGATGGCGTGCAGTCAGCTTAAATGATAAAAGTTATAAG
TTTTTCCTTTCGTATATAGTTTTGATTCAAATTTGTCATGATTGTGAATGCAAGCGAATC
ATGTCGAATCTCTGAGAAT