Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88782
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:9859612:9865090:-1 gene:SORBI_3002G095400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGATTGAGAGGGAAGCTCCGGGTAACGACAAGGCCAGGAGCTGGAGAGCTAATGTA
GCACAGGAAGATTCTAAGACGAAGCTTGACGGCGGTGATCAGCTGATGAAGGAGCCTGCA
TGGAAAAGGTTCCTGGCTCATGTTGGGCCAGGGTTTATGGTGTCATTGGCATACTTGGAT
CCTGGCAACTTGGAAACGGATCTGCAAGCAGGAGCGAATCACCGATACGAGCTCCTCTGG
GTGATTCTCATTGGTCTCATCTTCGCACTCATCATTCAATCACTAGCAGCTAATCTTGGA
GTGGTAACAGGGAGGCATCTTGCTGAGATATGCAAGAGTGAGTATCCAAAATTTGTGAGG
ATCTGTCTATGGATTCTCGCAGAGGTGGCTGTAATCGCGGCAGATATCCCAGAAGTTATA
GGGACAGCCTTCGCTTTCAACCTCTTATTCCACATCCCCGTGTGGGTGGGGGTTCTCATC
ACCGGCTCCAGCACTCTCCTGCTTCTGGGCCTACAAAGATACGGGGTGCGGAAGCTCGAG
TTCCTGATCTCGATGCTGGTGTTCGTCATGGCGGCGTGCTTCTTTGGAGAGCTGAGCATC
GTGAAGCCGCCGGCAGTGGAGGTGATCAAGGGGCTCTTCATCCCCAGGCTCAAGGGCGAC
GGCGCCACAGCAGACGCCATTGCTCTCCTTGGAGCTCTTGTCATGCCGCACAACCTGTTC
CTGCACTCTGCTCTGGTGCTGTCTCGGAAGACGCCGTCGTCGGTGAGAGGGATCAAGGAC
GCGTGCCGGTTCTTCCTCTACGAGAGCGGCTTCGCGCTGTTCGTGGCGCTGCTCATCAAC
ATCGCCGTCATCTCCGTCTCCGGCACCGTCTGCTTCTCCGGCAACCTCTCGCCGGAGGAC
GCCGACAAGTGCAGCGACCTCTCGCTCGACTCCTCCTCCTTTCTCCTCAAGAACGTGCTG
GGCAGGTCGAGTTCCATCGTCTACGGCGTGGCGCTGTTGGCCTCTGGGCAGAGTTCCACC
ATAACAGGCACCTATTCCGGCCAGTACATCATGCAGGGTTTTCTGGACATCAGGATGAAG
AAGTGGCTGAGGAACCTGATGACACGCTGCATCGCCATTGCGCCGAGCCTAGTCGTCTCC
ATCATCGGCGGCTCCAGTGGCGCCGGCCGTCTCATCATCATCGCTTCGATGATCCTGTCC
TTTGAGCTGCCGTTCGCCCTCATCCCACTCCTCAAGTTCAGCAGCAGCAGGAGCAAGATG
GGGCCCCACAAGAACTCCATTTATATTATCGTGTTCTCGTGGTTGCTGGGGCTGATGATC
ATTGGCATCAACATGTACTTCCTGAGCACCAGCTTCGTCGGCTGGCTCATCCACAACTCC
CTCCCCATCTACGCCAACGTGCTCGTCGGCCTCGTCATCTTCCCCCTCATGCTCATCTAC
GTCCTCGCCGTCATCTACCTCACCTTTAGAAAGGACACCGTCGTCACCTTCGTCGCCGAC
TCCAACCAACTCGACAACGCCGAGAAGGCCAAGGCGGCCGGCGAGGAGGAGGATGACCAA
CCCGTGCCGTTCCGGCAGGACCTGGCGGACATCCCTCTGCCAGAGTAG

Peptide Sequence

PEP ID

OQU88782
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:9859612:9865090:-1 gene:SORBI_3002G095400 transcript:OQU88782 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEIEREAPGNDKARSWRANVAQEDSKTKLDGGDQLMKEPAWKRFLAHVGPGFMVSLAYLD
PGNLETDLQAGANHRYELLWVILIGLIFALIIQSLAANLGVVTGRHLAEICKSEYPKFVR
ICLWILAEVAVIAADIPEVIGTAFAFNLLFHIPVWVGVLITGSSTLLLLGLQRYGVRKLE
FLISMLVFVMAACFFGELSIVKPPAVEVIKGLFIPRLKGDGATADAIALLGALVMPHNLF
LHSALVLSRKTPSSVRGIKDACRFFLYESGFALFVALLINIAVISVSGTVCFSGNLSPED
ADKCSDLSLDSSSFLLKNVLGRSSSIVYGVALLASGQSSTITGTYSGQYIMQGFLDIRMK
KWLRNLMTRCIAIAPSLVVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSRSKM
GPHKNSIYIIVFSWLLGLMIIGINMYFLSTSFVGWLIHNSLPIYANVLVGLVIFPLMLIY
VLAVIYLTFRKDTVVTFVADSNQLDNAEKAKAAGEEEDDQPVPFRQDLADIPLPE

Transcript Sequence

Transcript ID

OQU88782
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:9859612:9865090:-1 gene:SORBI_3002G095400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCTGCTAATAAGCAACGTCTTTGGGAGAGTTCAGAGTCGACACACAACTAACTGTAGGCA
GTTAGGCATGGAGATTGAGAGGGAAGCTCCGGGTAACGACAAGGCCAGGAGCTGGAGAGC
TAATGTAGCACAGGAAGATTCTAAGACGAAGCTTGACGGCGGTGATCAGCTGATGAAGGA
GCCTGCATGGAAAAGGTTCCTGGCTCATGTTGGGCCAGGGTTTATGGTGTCATTGGCATA
CTTGGATCCTGGCAACTTGGAAACGGATCTGCAAGCAGGAGCGAATCACCGATACGAGCT
CCTCTGGGTGATTCTCATTGGTCTCATCTTCGCACTCATCATTCAATCACTAGCAGCTAA
TCTTGGAGTGGTAACAGGGAGGCATCTTGCTGAGATATGCAAGAGTGAGTATCCAAAATT
TGTGAGGATCTGTCTATGGATTCTCGCAGAGGTGGCTGTAATCGCGGCAGATATCCCAGA
AGTTATAGGGACAGCCTTCGCTTTCAACCTCTTATTCCACATCCCCGTGTGGGTGGGGGT
TCTCATCACCGGCTCCAGCACTCTCCTGCTTCTGGGCCTACAAAGATACGGGGTGCGGAA
GCTCGAGTTCCTGATCTCGATGCTGGTGTTCGTCATGGCGGCGTGCTTCTTTGGAGAGCT
GAGCATCGTGAAGCCGCCGGCAGTGGAGGTGATCAAGGGGCTCTTCATCCCCAGGCTCAA
GGGCGACGGCGCCACAGCAGACGCCATTGCTCTCCTTGGAGCTCTTGTCATGCCGCACAA
CCTGTTCCTGCACTCTGCTCTGGTGCTGTCTCGGAAGACGCCGTCGTCGGTGAGAGGGAT
CAAGGACGCGTGCCGGTTCTTCCTCTACGAGAGCGGCTTCGCGCTGTTCGTGGCGCTGCT
CATCAACATCGCCGTCATCTCCGTCTCCGGCACCGTCTGCTTCTCCGGCAACCTCTCGCC
GGAGGACGCCGACAAGTGCAGCGACCTCTCGCTCGACTCCTCCTCCTTTCTCCTCAAGAA
CGTGCTGGGCAGGTCGAGTTCCATCGTCTACGGCGTGGCGCTGTTGGCCTCTGGGCAGAG
TTCCACCATAACAGGCACCTATTCCGGCCAGTACATCATGCAGGGTTTTCTGGACATCAG
GATGAAGAAGTGGCTGAGGAACCTGATGACACGCTGCATCGCCATTGCGCCGAGCCTAGT
CGTCTCCATCATCGGCGGCTCCAGTGGCGCCGGCCGTCTCATCATCATCGCTTCGATGAT
CCTGTCCTTTGAGCTGCCGTTCGCCCTCATCCCACTCCTCAAGTTCAGCAGCAGCAGGAG
CAAGATGGGGCCCCACAAGAACTCCATTTATATTATCGTGTTCTCGTGGTTGCTGGGGCT
GATGATCATTGGCATCAACATGTACTTCCTGAGCACCAGCTTCGTCGGCTGGCTCATCCA
CAACTCCCTCCCCATCTACGCCAACGTGCTCGTCGGCCTCGTCATCTTCCCCCTCATGCT
CATCTACGTCCTCGCCGTCATCTACCTCACCTTTAGAAAGGACACCGTCGTCACCTTCGT
CGCCGACTCCAACCAACTCGACAACGCCGAGAAGGCCAAGGCGGCCGGCGAGGAGGAGGA
TGACCAACCCGTGCCGTTCCGGCAGGACCTGGCGGACATCCCTCTGCCAGAGTAGCCGAG
TAGCTACAAACACTGCGAAAGGGCATGTAACCTGGTGGTTACAAGAGCTTTAGTAGCACT
TAGATCTTTGGCTTCGACTCCTTGTGGGATCGTGTATTCTAAGATTTAATGGTGTTATGC
TTTTAGCGGTAGATAACGTTCTTATCGATAGCGAGACACCTATGCTGACTTCTTCAATCT
CGAGGATTTGCCGGCTCAGTCTTTGAAGATGCTCATCACAGAGGTAGGATTTACGTGTGT
GTGAGTTCATAGGAGTGAGTGTGCATGCGTTGAGAGTGTTTGAGTTATACGGTGTAATTG
GAAAAAAAATATCTACAAACACTCTTTGTCTTCTAAGTGTATATATATATATATATAATC
TTGGTGGC