Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88747
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:9051077:9053857:1 gene:SORBI_3002G085200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTGTCAACTGGCAAGTGGGCAGCAACCACACATCCAAGACTCCACAAGAAACCGTCA
ATGGGTTCCATTGGAGGACACACCGCCACCGGCGACCGGCGCCGCCGCGTGCTGTTCTTC
CCGCTCCCGTACCAGGGCCACATCAACCCCATGTTCCAGCTCGCCGGCCTCCTCCACTCG
CGCGGGTTCGCCGTCACCGTCTTCCACACCGACTTCAACGCCCCCGACAAGTCCCGCCAC
CCTGCCTACGACTTCGTCCCCGTGCCCGTCGTCTCCGACTGCTTGCCGCCGGAGGGCAGC
TCGGATGCCTTCCAGGTGACCGTCCAGCACATCCTCGCCGTGAACCGCGCCTGTGAGGCT
CCGTTCCGGGAGCGCCTGGCCGCGCTGCTGTCGTCGTCGGAGTCGGAGCAGCAGGCACAG
CAGGAGGACGACGACGTCGCGTGCCTCGTCGCCGACGCCCACCTTCTGACGCTCCTGGAC
GTTGCGCGGGGGCTCGGCGTGCCCACGCTCGTGCTGCGCACCGGCAGCGCTGCCGGCCTC
CGCATGTTCGCGGCGTTCCCCGTGCTCTCCGACAAGGGGTACCAGCCGGCGCAAGAGTCG
CAGCTGGAGGCGCCGGTGAGGGAGCTGCCGCCGTACCGCGTCCGGGACCTGCCGTCGACT
ACCGTCGCCTACCACGGCGTAATAAGCGAGGTCATTTCCCGTATAGTGACGGCCGTGACG
ACCTCCTCGGGCGTCATCCTCAACACCATGGACGCGCTCGAGTCCGGCGAGCTGGCGTCG
CTCCGGCGAGACCTCGGCGTGCCCGTGTTCGACATCGGCCCGCTCCACAAGCTCTCACCA
GCGGCCTCGAGCACGAGCAGCTTGCTCCTGCAGGACCGCGGCTGTCTCGAGTGGCTCGAC
GCGCAAGCCCCGGCGTCCGTGCTCTACGTCAGCTTCGGCAGCCTCGCCAGCATGTCCGCC
GCCGAGCTGGTGGAAACAGCCTGGGGCATAGCCAACAGCGGCCACCCGTTCCTGTGGGTT
CTCCGTCCGGGGCTCGTCCGCGGAACGCCACCGTCGTCGTCGTCGTCGGAGGCGCCAGCG
CCAGTACTACCAGCGCTGCCCGACGGCTTCGACGCCGCGACGCGCGGGCGTGGCGTGGTC
GTGAGGTGGGCGCCGCAGGAGGAGGTCCTGGAGCACCCCGCCGTGGGCGCGTTCTGGACG
CACTGCGGCTGGAACTCGACGCTGGAGAGCGTGTGCGCCGGCGTGCCGATCATGGCGCGC
CCGTGCTTCGGCGACCAGATGGGGAACGCGAGGTACGTGGAGGACGTGTGGCGGACGGGC
CTCACGCTCGTCGACGGCGAGGAGATCGTGAGGGGCAAGGTGGAGGCGGCCGTCGCGGCG
GTGATGGGGCCAGGAGAGTCCGGCGACGGGCTGCGGCGGAGGGCGCGGGAGCTCAAGAGC
AGCGCGGCGGAGTGCATGGCCGAGGATGGGTCGTCCTGGACGAGCGTCGACAAGCTGGAG
CTCATGATCCTCAACTCGGCACTCAGTCACAGTAGACTCGATCTCATGGATACCTTCAGC
ATGACAAGAAAGGGTTTCGTTGGTTGGATGGTTTTCTCAGAGACCGATTCTTTAGGCTTC
AGTTAG

Peptide Sequence

PEP ID

OQU88747
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:9051077:9053857:1 gene:SORBI_3002G085200 transcript:OQU88747 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVSTGKWAATTHPRLHKKPSMGSIGGHTATGDRRRRVLFFPLPYQGHINPMFQLAGLLHS
RGFAVTVFHTDFNAPDKSRHPAYDFVPVPVVSDCLPPEGSSDAFQVTVQHILAVNRACEA
PFRERLAALLSSSESEQQAQQEDDDVACLVADAHLLTLLDVARGLGVPTLVLRTGSAAGL
RMFAAFPVLSDKGYQPAQESQLEAPVRELPPYRVRDLPSTTVAYHGVISEVISRIVTAVT
TSSGVILNTMDALESGELASLRRDLGVPVFDIGPLHKLSPAASSTSSLLLQDRGCLEWLD
AQAPASVLYVSFGSLASMSAAELVETAWGIANSGHPFLWVLRPGLVRGTPPSSSSSEAPA
PVLPALPDGFDAATRGRGVVVRWAPQEEVLEHPAVGAFWTHCGWNSTLESVCAGVPIMAR
PCFGDQMGNARYVEDVWRTGLTLVDGEEIVRGKVEAAVAAVMGPGESGDGLRRRARELKS
SAAECMAEDGSSWTSVDKLELMILNSALSHSRLDLMDTFSMTRKGFVGWMVFSETDSLGF
S

Transcript Sequence

Transcript ID

OQU88747
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:9051077:9053857:1 gene:SORBI_3002G085200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTTGAATCCTTGTCCACCGGAGACTAACCTAACATTAAGAACCAGAGCATGGTGTCAACT
GGCAAGTGGGCAGCAACCACACATCCAAGACTCCACAAGAAACCGTCAATGGGTTCCATT
GGAGGACACACCGCCACCGGCGACCGGCGCCGCCGCGTGCTGTTCTTCCCGCTCCCGTAC
CAGGGCCACATCAACCCCATGTTCCAGCTCGCCGGCCTCCTCCACTCGCGCGGGTTCGCC
GTCACCGTCTTCCACACCGACTTCAACGCCCCCGACAAGTCCCGCCACCCTGCCTACGAC
TTCGTCCCCGTGCCCGTCGTCTCCGACTGCTTGCCGCCGGAGGGCAGCTCGGATGCCTTC
CAGGTGACCGTCCAGCACATCCTCGCCGTGAACCGCGCCTGTGAGGCTCCGTTCCGGGAG
CGCCTGGCCGCGCTGCTGTCGTCGTCGGAGTCGGAGCAGCAGGCACAGCAGGAGGACGAC
GACGTCGCGTGCCTCGTCGCCGACGCCCACCTTCTGACGCTCCTGGACGTTGCGCGGGGG
CTCGGCGTGCCCACGCTCGTGCTGCGCACCGGCAGCGCTGCCGGCCTCCGCATGTTCGCG
GCGTTCCCCGTGCTCTCCGACAAGGGGTACCAGCCGGCGCAAGAGTCGCAGCTGGAGGCG
CCGGTGAGGGAGCTGCCGCCGTACCGCGTCCGGGACCTGCCGTCGACTACCGTCGCCTAC
CACGGCGTAATAAGCGAGGTCATTTCCCGTATAGTGACGGCCGTGACGACCTCCTCGGGC
GTCATCCTCAACACCATGGACGCGCTCGAGTCCGGCGAGCTGGCGTCGCTCCGGCGAGAC
CTCGGCGTGCCCGTGTTCGACATCGGCCCGCTCCACAAGCTCTCACCAGCGGCCTCGAGC
ACGAGCAGCTTGCTCCTGCAGGACCGCGGCTGTCTCGAGTGGCTCGACGCGCAAGCCCCG
GCGTCCGTGCTCTACGTCAGCTTCGGCAGCCTCGCCAGCATGTCCGCCGCCGAGCTGGTG
GAAACAGCCTGGGGCATAGCCAACAGCGGCCACCCGTTCCTGTGGGTTCTCCGTCCGGGG
CTCGTCCGCGGAACGCCACCGTCGTCGTCGTCGTCGGAGGCGCCAGCGCCAGTACTACCA
GCGCTGCCCGACGGCTTCGACGCCGCGACGCGCGGGCGTGGCGTGGTCGTGAGGTGGGCG
CCGCAGGAGGAGGTCCTGGAGCACCCCGCCGTGGGCGCGTTCTGGACGCACTGCGGCTGG
AACTCGACGCTGGAGAGCGTGTGCGCCGGCGTGCCGATCATGGCGCGCCCGTGCTTCGGC
GACCAGATGGGGAACGCGAGGTACGTGGAGGACGTGTGGCGGACGGGCCTCACGCTCGTC
GACGGCGAGGAGATCGTGAGGGGCAAGGTGGAGGCGGCCGTCGCGGCGGTGATGGGGCCA
GGAGAGTCCGGCGACGGGCTGCGGCGGAGGGCGCGGGAGCTCAAGAGCAGCGCGGCGGAG
TGCATGGCCGAGGATGGGTCGTCCTGGACGAGCGTCGACAAGCTGGAGCTCATGATCCTC
AACTCGGCACTCAGTCACAGTAGACTCGATCTCATGGATACCTTCAGCATGACAAGAAAG
GGTTTCGTTGGTTGGATGGTTTTCTCAGAGACCGATTCTTTAGGCTTCAGTTAGCTAGCA
TAGGACCGAGTATTTGAGTTGTAATTTATGACTAGTCTTAGCGTGTCCTAGTCTTCAACT
GATCCAAGCTTGTAGGAGTCAGTTAGTCTTGAGTGGCTAGCCTTGATCGGTATCGTGTAT
ATGTACTCTGAACTCTGCACATGAATGAATTAAGCATTCATGTTCTTACATGGTATCAAA
GCCTTTCTTCGATCCCCACCCTCTGCTTCCGCTATTCCCACCCATGACGAGCCCCGTTAG
TTCATCCGCCGGCACCAACCCCTTCGCTGATCCTCCTCCACCCTCTGCCTCGTCCCTCAT
GATGCTGAACATCCGTAGCCATGTCACCGTCGCTCTCTCCACCGACGAGGGCAACTTCCG
GCAATGGCGTTCCTTCTTCGAGGTGACCCTCAAAAAATTCAGCCTCCTCGACCACATCGA
CGGCTCGGTGGATGCCGCTGCCATGATCGACGACGCCGAGTGGCTCCAGGTTGATGCCTG
CATCGTCTCTTGGCTCTACGCCACCATCTCCAAGGAGATCCGGAACAATGTCAATCGCCC
CAACGCCACCGCCTACACCGTCTGGAGAGCGATCACAGGCCAATTCCTCAACAACAGCCT
TTAGCGCGCCGTGTACGCCCAACAAGAATTTCACAGCCTTTTCCAGGGCGACATGGGCAT
CGCCGAGTACTGCGGCAAGCTGAAGCGCCTCGCCGACACGCTCTCGACTGCGGCGCCGCC
GTCTCCGACCTCACTCTCGTCATCAACACTCTGCGCGGGCTGAACAACAAATTCAGCCAG
GCGATCGC