Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88716
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:8228798:8234622:1 gene:SORBI_3002G079100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTCAGCAAATGGCTTCAGTTCCTTTGAATGATGCAGCAGTTGTTGATGCCAAGCCC
TTGCGTACATTGACTCCCATGTTCCCCGCACCATTAGGGCTTCACACATTCACTCATCAA
AACTCACCTTCAGTTGTTTGTGTGACCCCATTTGGACCATATGCTGGAGGCACTGAATTG
GGGAAGCCTGCTGTTCCACCAATGTTTGCAGCGCCCACACCTGCTGCAGAAGCAGAACCC
AGCCAGAGACAACTGGATACAGCTAATATGAATGGAGCTGCTCATGCTAATGGTACTGCA
GTCAACAGTTTGGTCACACCTTTGCAAACTCCTCCGTCAGCTGCCACACAGGAATCTGGT
AAGAGGAAGAGGGGCAGGCCAAAGCGTGTGCTTGATACTACTGTTGCTTCAGTTCCTTCA
GCTCCTCTGGCTACTACTATTCCTCCAGTTCCTTCCCTTCCTGTGGTTACTCCAGTTCCT
TCAGCTCCTCAGGAAGGTAACACTATTGTTTCCCTGACGCCTTCTTCAGACGCCCCACAA
GAATCTGGCAAGAGGAAGAGGGGACGACCCAAACGTGTACAAGATGTTCCTGTAATGGCT
CCTCCAACCTCCCAAGGAGATAGCACGCCTGTTATTCAGACACTTCCAGGGCCCAGTGTT
CATGAATTTGGTACGAGGAAAAGGGGACGACCCAAACGTTTGCAGGATAGTTCAGATATT
GCCACTCCAATTGACTCAAAAGATTTACCTATATCCTCTCCCCAGCCACTTTCTGCTGCA
GCACCTGCTGAAAGTGGTAAGAGGAAGAGGGGCCGTCCAAAGCGCGTGCTTGATGGATCA
GCGACTCCATCAAGTCATTCAGGTTTTTCAATAGACGGTGATGCTGTTGACACAATGAAA
CGTGGACGACCTAGGAAAATTGACACCAATCTGTTACAGCTTCCATCTTTATCTTCAGAT
GATCCTAGGCAAACTGCAGATAATGTACTCATGATGTTTGACGCCCTGCGACGCAGACTT
ATGCAGATGGATGATGTGAAACAAGTTGCAAAGCAGCAGCCTAACTTGAAGGCTGGGAGC
ATCATGATCAATGCTGAACTTCGTGTCAATAAGAACAAGAGGATAGGAGAGGTTCCAGGT
GTTGAGGTTGGTGATATGTTCTACTTCAGAATTGAGATGTGCTTAGTGGGGCTGAATAGT
CAGAGCATGGCAGGGATAGATTACATGTCTGCCAAGTTTGGTAATGAGGAGGACCCTGTA
GCTATTAGTGTTGTATCAGCTGGTGTATATGATAACACTGAAGATGATCCAGATATTTTA
GTTTACACTGGACAGGGCATGTCTGGTAAGGATGACCAAAAACTTGAGAGGGGTAATCTT
GCACTGGAGAGGAGTTTGCATAGAGGTAATCCAATCAGAGTCATTCGTAGCGTAAAAGAT
ATGACGTGTCCAACTGGCAAGATTTACATATATGATGGCCTTTACAAGATCAAAGAAGCC
TGGGTAGAGAAAGGGAAATCTGGTTTCAATGTGTTTAAACACAAGTTGCTTAGGGAACCT
GGCCAACCTGATGGCATTGCAGTATGGAAGAAGACTGAAAAATGGAGGGAAAATCCATCA
TCTAGAGACCATGTTATATTGCTTGACATATCATATGGTGTGGAAAGTAACCCTGTCTGC
CTTGTAAATGAGGTTGATGATGAGCAGGGCCCTAGCCACTTCACCTATACAACTAAATTG
ACATATGGGAATTCTCTGAACTCGATGAGAAAGATGCAAGGTTGCAAATGCATTAGTGTG
TGCCTACCTGGTGATAACAGCTGCTCTTGTACGCATCGAAATGCTGGTGACCTTCCTTAC
AGTGCTTCAGGCATACTTGTTAGCCGCATGCCTGTTTTATATGAGTGTGGTGATTCCTGC
ACATGTTCATACAATTGCCGGAACCGAGTTGTACAGAAAGGTACACAGATCCGTTTTGAA
GTTTTTAAGACAGGAGAACGTGGTTGGGGCCTCCGTAGTTGGGATCCAATTCGAGCAGGC
ACATTTATCTGTGAATATGCAGGTGAAATCATTGACAGAAATAGCGTGACTGGTGAAGAT
GACTACATATTTGAGACTTCTCCTTCAGAGCAGAATTTAAGATGGAACTATGCACCAGAA
TTGCTGGGTGAACCTAGTCTTTCTGACTCAAATGAGACACCTAAGCGACTGCCTATAGTC
ATCAGTGCAAAACGAACCGGCAACATAGCTCGCTTTATAAACCACAGTTGCTCACCTAAT
GTGTTTTGGCAACCAGTTTTGTATGATCATGGTGATGAGGGATATCCACATATTGCATTC
TTTGCAATTAAGCATATTCCTCCAATGACAGAGCTTACCTATGATTATGGTCAGAACCAT
CATCCTAATATTCAAATGGGAACACATTCTAGTTTTGGGAAGTCTAAAAGTTGCTTATGT
TGGTCCCCCAAGTGTAGAGGTTCCTTTGGCTAA

Peptide Sequence

PEP ID

OQU88716
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:8228798:8234622:1 gene:SORBI_3002G079100 transcript:OQU88716 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAQQMASVPLNDAAVVDAKPLRTLTPMFPAPLGLHTFTHQNSPSVVCVTPFGPYAGGTEL
GKPAVPPMFAAPTPAAEAEPSQRQLDTANMNGAAHANGTAVNSLVTPLQTPPSAATQESG
KRKRGRPKRVLDTTVASVPSAPLATTIPPVPSLPVVTPVPSAPQEGNTIVSLTPSSDAPQ
ESGKRKRGRPKRVQDVPVMAPPTSQGDSTPVIQTLPGPSVHEFGTRKRGRPKRLQDSSDI
ATPIDSKDLPISSPQPLSAAAPAESGKRKRGRPKRVLDGSATPSSHSGFSIDGDAVDTMK
RGRPRKIDTNLLQLPSLSSDDPRQTADNVLMMFDALRRRLMQMDDVKQVAKQQPNLKAGS
IMINAELRVNKNKRIGEVPGVEVGDMFYFRIEMCLVGLNSQSMAGIDYMSAKFGNEEDPV
AISVVSAGVYDNTEDDPDILVYTGQGMSGKDDQKLERGNLALERSLHRGNPIRVIRSVKD
MTCPTGKIYIYDGLYKIKEAWVEKGKSGFNVFKHKLLREPGQPDGIAVWKKTEKWRENPS
SRDHVILLDISYGVESNPVCLVNEVDDEQGPSHFTYTTKLTYGNSLNSMRKMQGCKCISV
CLPGDNSCSCTHRNAGDLPYSASGILVSRMPVLYECGDSCTCSYNCRNRVVQKGTQIRFE
VFKTGERGWGLRSWDPIRAGTFICEYAGEIIDRNSVTGEDDYIFETSPSEQNLRWNYAPE
LLGEPSLSDSNETPKRLPIVISAKRTGNIARFINHSCSPNVFWQPVLYDHGDEGYPHIAF
FAIKHIPPMTELTYDYGQNHHPNIQMGTHSSFGKSKSCLCWSPKCRGSFG

Transcript Sequence

Transcript ID

OQU88716
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:8228798:8234622:1 gene:SORBI_3002G079100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGCCTGATCTGCTTGAGTTGAGTGCGTCGCCGTCCTCGGCTCGTCAGCACTCGCGTAGTT
GCCGCATCTGCCCACACTGCCACTGCCCACACCCAAAACCCTAGCTGCGCACCCAAAATC
GATCCAGGGACGGCAGCGGCACGGCGCGGCGAAATCGGTTCAGAGCCAGCGTCGCGACGA
TATCGGTCCACGACCGCCACGGTTGGACCAGCTGCTCCGTGCCCGTGCGGCCGTGCGGAC
GGCCGGCATTGGCGCGCAGCGCGCTGCTGCAGGCCGGTGGTGTGCCGGGCGGCTGGGCGA
CGCGAAACAGATCCCCACCGCCTTGGAGGCTTGCTGCGTGCAGCAGGACCGGGAGTCAGG
GACAGCAGGTTGTTTACTTCTGAGTTCGTTCCTGCCCCATGACCCATCCTATTTCAATTG
CACAGATTGTAATCTGAATGTCCTATTACGTGTTTATGCTCCACTTTTGTAGATTCGTAC
TAGACTAATTACCTTTGCTCCTTTTCCCAATAAGGATAGTCTGTACCATTTTCAAGATTT
GAAGTCTATGTTTAAACAAGGCTGCCCCGAGTATCTCCAGCTTTAGTGCTAGTAGCATGT
TGTCTCTGGATATGTGAACCGGTGTGTGGCGTTTACGCGCTTAGTTGCTGGCCCTAGTCA
TGCCGATTCACTGGCTCCGGCACTGGCCGGGCACCTGGGCGGTATAATTTGTCCTGCACT
CCTGCTTGGCCCATTGACATAATGGTATATAAAGAATGTTGCCAAGCATCGGGACCCATA
GCATGCCAAACATGGAGGCAGCACTCCAACAGTAGTCACCTAAGTTTTGGCAAATTTAAT
TGAATAATAACTAGCTTCTCCATCTGTTATTTCTGAGCACCATTTACCTTTGTTTATTGT
ATCCAAACATTCTCCAGCCTTCTTCTCCATCTATTATTTCTGAGCACCATTTACCTTTGT
TTATTGTATCCAAACATTCTCCAGCCTTTCTTTTCTGTTACTACCTACCACAATTTTTTA
TTCTTATTCCATTGTGCTGTTAGAGAGAATGCCAAATTATTTCTGATCTGTGCTTAAACA
AAATTTAGAATGTAAAGTTATATGAAGGTCCTAGCAAAAACTTGCTCTAGAATTGTAATA
ATAAGAAGTTATCTAAGCTTATAGAAGGTATTTTTGTTTTTAGAAATCAGGAAAGTGATA
TAAATTTATTTATTAATGATATGAAAGTACTTTTGGTGACATTGTACTTGTGCCAGTTTC
TGTTATACAACTTAAGTACTTGCAAATACCTCAAATTACTGAGTAAACATACTTTGAAAA
ATGCATGTACAAAAGTATCTTCTGATTTATTATACTGGAATGAGTAATTGCTTTGTTACA
AGGTACCTGCGGCAACATTTATAATCTGATCTGCCCTTGCTTCTGGAAATCCAAGTTCCA
TGCAACTCTTGGTTTCTTGAAACTGACTCATTTGTCAGGCATATCTCGTGACATTTGTAT
ATCTGATTACTATAGATGCTTCTAAATCTTTCTTGTGATGCTATTTTAAGTTGGCACTTA
CAATTACAATTGAACTTGCTACTTTAACTTGCTTATGCTACTAGCATTGCTATCTTCTGT
TCCTATTTATTAAGCTAGAAATCTGTACAACAATTGCGATAATATTTCCTAATCTGATAT
TTCTTCTTGGATATTAATAGAAAAAATTACCAAAAATGGTGCATTAATCAATAAGAAATC
ATATGTTTTGACTCCTTGTTCCATTTTTATACCACAACACTGATTGATCTCTCCTGCTCC
TTTTCAGATTTCCACAAAGTATGAGCTGTGAACTAGTGTTAGAGGAAAGCACGGAGGAAA
TAGTGGCATAAAATTTTATTTGTCGAAAGATCAATTGGTTTCTTAAAATGGCTCAGCAAA
TGGCTTCAGTTCCTTTGAATGATGCAGCAGTTGTTGATGCCAAGCCCTTGCGTACATTGA
CTCCCATGTTCCCCGCACCATTAGGGCTTCACACATTCACTCATCAAAACTCACCTTCAG
TTGTTTGTGTGACCCCATTTGGACCATATGCTGGAGGCACTGAATTGGGGAAGCCTGCTG
TTCCACCAATGTTTGCAGCGCCCACACCTGCTGCAGAAGCAGAACCCAGCCAGAGACAAC
TGGATACAGCTAATATGAATGGAGCTGCTCATGCTAATGGTACTGCAGTCAACAGTTTGG
TCACACCTTTGCAAACTCCTCCGTCAGCTGCCACACAGGAATCTGGTAAGAGGAAGAGGG
GCAGGCCAAAGCGTGTGCTTGATACTACTGTTGCTTCAGTTCCTTCAGCTCCTCTGGCTA
CTACTATTCCTCCAGTTCCTTCCCTTCCTGTGGTTACTCCAGTTCCTTCAGCTCCTCAGG
AAGGTAACACTATTGTTTCCCTGACGCCTTCTTCAGACGCCCCACAAGAATCTGGCAAGA
GGAAGAGGGGACGACCCAAACGTGTACAAGATGTTCCTGTAATGGCTCCTCCAACCTCCC
AAGGAGATAGCACGCCTGTTATTCAGACACTTCCAGGGCCCAGTGTTCATGAATTTGGTA
CGAGGAAAAGGGGACGACCCAAACGTTTGCAGGATAGTTCAGATATTGCCACTCCAATTG
ACTCAAAAGATTTACCTATATCCTCTCCCCAGCCACTTTCTGCTGCAGCACCTGCTGAAA
GTGGTAAGAGGAAGAGGGGCCGTCCAAAGCGCGTGCTTGATGGATCAGCGACTCCATCAA
GTCATTCAGGTTTTTCAATAGACGGTGATGCTGTTGACACAATGAAACGTGGACGACCTA
GGAAAATTGACACCAATCTGTTACAGCTTCCATCTTTATCTTCAGATGATCCTAGGCAAA
CTGCAGATAATGTACTCATGATGTTTGACGCCCTGCGACGCAGACTTATGCAGATGGATG
ATGTGAAACAAGTTGCAAAGCAGCAGCCTAACTTGAAGGCTGGGAGCATCATGATCAATG
CTGAACTTCGTGTCAATAAGAACAAGAGGATAGGAGAGGTTCCAGGTGTTGAGGTTGGTG
ATATGTTCTACTTCAGAATTGAGATGTGCTTAGTGGGGCTGAATAGTCAGAGCATGGCAG
GGATAGATTACATGTCTGCCAAGTTTGGTAATGAGGAGGACCCTGTAGCTATTAGTGTTG
TATCAGCTGGTGTATATGATAACACTGAAGATGATCCAGATATTTTAGTTTACACTGGAC
AGGGCATGTCTGGTAAGGATGACCAAAAACTTGAGAGGGGTAATCTTGCACTGGAGAGGA
GTTTGCATAGAGGTAATCCAATCAGAGTCATTCGTAGCGTAAAAGATATGACGTGTCCAA
CTGGCAAGATTTACATATATGATGGCCTTTACAAGATCAAAGAAGCCTGGGTAGAGAAAG
GGAAATCTGGTTTCAATGTGTTTAAACACAAGTTGCTTAGGGAACCTGGCCAACCTGATG
GCATTGCAGTATGGAAGAAGACTGAAAAATGGAGGGAAAATCCATCATCTAGAGACCATG
TTATATTGCTTGACATATCATATGGTGTGGAAAGTAACCCTGTCTGCCTTGTAAATGAGG
TTGATGATGAGCAGGGCCCTAGCCACTTCACCTATACAACTAAATTGACATATGGGAATT
CTCTGAACTCGATGAGAAAGATGCAAGGTTGCAAATGCATTAGTGTGTGCCTACCTGGTG
ATAACAGCTGCTCTTGTACGCATCGAAATGCTGGTGACCTTCCTTACAGTGCTTCAGGCA
TACTTGTTAGCCGCATGCCTGTTTTATATGAGTGTGGTGATTCCTGCACATGTTCATACA
ATTGCCGGAACCGAGTTGTACAGAAAGGTACACAGATCCGTTTTGAAGTTTTTAAGACAG
GAGAACGTGGTTGGGGCCTCCGTAGTTGGGATCCAATTCGAGCAGGCACATTTATCTGTG
AATATGCAGGTGAAATCATTGACAGAAATAGCGTGACTGGTGAAGATGACTACATATTTG
AGACTTCTCCTTCAGAGCAGAATTTAAGATGGAACTATGCACCAGAATTGCTGGGTGAAC
CTAGTCTTTCTGACTCAAATGAGACACCTAAGCGACTGCCTATAGTCATCAGTGCAAAAC
GAACCGGCAACATAGCTCGCTTTATAAACCACAGTTGCTCACCTAATGTGTTTTGGCAAC
CAGTTTTGTATGATCATGGTGATGAGGGATATCCACATATTGCATTCTTTGCAATTAAGC
ATATTCCTCCAATGACAGAGCTTACCTATGATTATGGTCAGAACCATCATCCTAATATTC
AAATGGGAACACATTCTAGTTTTGGGAAGTCTAAAAGTTGCTTATGTTGGTCCCCCAAGT
GTAGAGGTTCCTTTGGCTAATAACCAGCCCTATAAGGAAGTTATTGGATCATAATATTCC
ATTTAAAAGGTTAGTGATTTCCAATTGCTTTCTTGACATTCCTTTTCCAAAAAATATTAT
GTCTCCTGCAACCATTGACTTAAGAGTTCCTGTGCTAGTAGAGTTCTTTGGCTAATATTC
TGCTTCTGCATTGATGGTGCATGTGATGCTTATGATATAGTCACATTAAACATTCCAATC
GGGAAAACTGTATTTTAGTGCCTTCGGTTAAATTGAAATCTGATACTAGATGGTTTGTTT
ATACTAATTTTAGGAATTCTGAACTCCCAAGATATGGTAGTTACAGCCTGTTTCTTTATA
TTCCCTGTGTTTTCACATTAGAAAATGTGCTTTGGCCCATCTGCGTCCATATTCTTTGAC
AGATAAAAGTTGCCGGTTTGGCCAAATTCTAGGAGTTGGGAAATCCAAAATATAAAGTGC
AACAGTGGTGTTAGAAATTTCCATTGACCTGGATGACATGTTGATGCCAAGCAGGCTGAT
CAACACTAGTTAGGGAGGTTTAGACCTCGAGTGAACCACTTGGCAAATTTTGGGACTCAT
GTGCTTATTTGTTTCTAATCTGGGTTTAGTTTTAGTTTGTAGCATCTTTTTTTGGAGTTG
CAACAGCCAAAATCCCACTAGAAGAGGCATCCTCTAACTAACCAGATTCAGCTCTGTGCA
ACAGCTACCACAAACAACAGACTCTAATACAACTACTAGTTCTTTTAGCCTTTATGTTTG
CAGTGGTTTTGGAAAATACTTGATGAATGCGTTATTTAATTTTGTACCAATTTTCTACCA
TCGTTCAAACACCAGATGTGATGCAATGTTTTTTTGTCCTCATGTAAGATCTCTACAACT
CTTATTAAATTTATGCCCTTTTCACAGCATTTTAATTACTTCTTATTGATCTTATGTGCT
TTTATATAATTGCATTAATGATCATCACAAGAGCTGCCTCTCTTTTTCTTTCAGTTACAC
CTATAGATCTCTGCTGATCTACTTTTAAATTCAGCTCCCAAAATTCTGTCACAAGTTTAT
GAGAGTAACTGAATTGTCTTTACCAGCAGAAGCAGCTCTTCATGGTGGCTTGTATGAAGC
AGCAGGGGGTCGTCTCCTAGGTGTTTCCATGCATCATCGAATAAGTCCACCTCTCTTCAT
GTTAGAATGTGAAATGGGATGTGTTTTGCACAAATCATTTGTCATCTACTCGTCGCATTA
AGTTTTCTTGAACTAGTTTTTTAGTCATCCTCAGAATGCATGTTGTCCACTTTGTAGTAA
TATATGCTGAGTTGTTACCCCTCCTACTGTGATGAACCATCAAAATTTCAGTGCTTGTAT
AGACGCCTTGTGTAGTTGCACTGCATGCAAATGTTAGTACACTGATATTCCATAATTTTA
CACCC