Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88692
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:7884092:7889052:-1 gene:SORBI_3002G076000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGCGTGCTGATGAGAATCTCCTTCCAGCAGTTTACAAGGAAGTCAGTGCAGCCTTC
AATGCTGGTCCTACTGATCTGGGATACCTCACCTTTGCAATGAACTTTCTGAAGTCAATA
GCATCTCCCTTGGCAGGTATCCTTGCTCTGCACTATGATCGGCCAACAGTGCTTGCAATA
GGGACTGTTTTCTGGGCCTTATCAACGGCGGCTGTCGGTGTTAGCCAACATTTTGGGCAG
GTTGCATTCTGGAGAGCTGTAAATGGCCTTGGGCTTGCCATTGTAATACCAGCGCTTCAG
TCGTTCATTGCTGATAGCTATAAAGATGGTACACGTGGTGCAGGATTCGGTTTGTTAAGC
CTCATTGGTGCTGTAGGTGGTATAGGTGGTAGTATTTTGGCAACAATCATGGCTGGAAAG
GACTATTGGGGATTCCCTGGATGGCGTGTTGCATTCATGATGGTCGCACTAGTCAGCTTG
ATAATTGGAATTCTTGTGTACTTATATGCAACTGATCCAAGAAGAATACCTGGCAATCGC
CTTCTTGATGAAGATGACTATGAGAGGTTGCATTTATCAAGCAAAGATGTTCTTCCTCCA
CCTTCTATCTGGAGGGATTCTTGGGTGGCAACAAGATCTGTTATGAAAGTGAAGACATTT
CAGATCATTGTCCTGCAAGGGATCATTGGCTCATTGCCATGGACTGCTATAGTTTTCTTC
ACAATGTGGTTTGAACTCATTGGTTTTGACAACAAAAGCTCGGCAGCACTGAACAGCCTC
TTCGCCATCGGGTGTGCCAGCGGAGCATTTCTTGGCGGAGTGATAGCAGACCACCTGTCA
AAGTACTTTCCAGATTCGGCACGTGTCATGTGCGCCCAGTTCAGTGCCTTCATGGGCATC
CCGTTCTCTTGGATCCTCCTCACAGTCATCCCCCAGTCAGTTGACTACTGGTATGCCTTC
GCCGTCACACTTTTCTTCATGGGCATCACGATAAGCTGGTGCGCCACCTCGGCAAACAAC
CCCATGTTTGCTGAGGTGGTCCCTCCCAAGCACCGCACCATGATCTACGCCTTCGACCGT
GCGTTCGAGGGCTCATTCGCCTCGCTGGCTGCCCCCGCAGTGGGCCTAGTCACCGAGAAG
ATTTATGGCTATGATACCAAGACTGTGAACCTTGCGAACGGATCAGCAGAAGGGGCGTAC
GCACTCTCAAGAGGGCTGCTGACCATGATGACCGTGCCTTTCGGTGTTTGTGTCCTGTTC
TACAGCCCACTGTACCTTGTGTTCAAGCACGACAGAGAGAACGCGAAACTCACCAGCTTC
AAGGAGCAGGAGCTAGTGTGA

Peptide Sequence

PEP ID

OQU88692
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:7884092:7889052:-1 gene:SORBI_3002G076000 transcript:OQU88692 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MERADENLLPAVYKEVSAAFNAGPTDLGYLTFAMNFLKSIASPLAGILALHYDRPTVLAI
GTVFWALSTAAVGVSQHFGQVAFWRAVNGLGLAIVIPALQSFIADSYKDGTRGAGFGLLS
LIGAVGGIGGSILATIMAGKDYWGFPGWRVAFMMVALVSLIIGILVYLYATDPRRIPGNR
LLDEDDYERLHLSSKDVLPPPSIWRDSWVATRSVMKVKTFQIIVLQGIIGSLPWTAIVFF
TMWFELIGFDNKSSAALNSLFAIGCASGAFLGGVIADHLSKYFPDSARVMCAQFSAFMGI
PFSWILLTVIPQSVDYWYAFAVTLFFMGITISWCATSANNPMFAEVVPPKHRTMIYAFDR
AFEGSFASLAAPAVGLVTEKIYGYDTKTVNLANGSAEGAYALSRGLLTMMTVPFGVCVLF
YSPLYLVFKHDRENAKLTSFKEQELV

Transcript Sequence

Transcript ID

OQU88692
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:7884092:7889052:-1 gene:SORBI_3002G076000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCGGTCCCCTGCCGCGTCGTCTTCCCCACCAGTCCACCCCTCCCCGTCCCCTAGCTCGCT
TCAGCTCGCAGCTCACAAAGCAGCAGACCAAGAAAAGAGCAGCGACCGAGAAAGAGAAGC
GCGCCTCCGCTGCTCTGTCGGAGCTCATCCCGCCGCCGGACCGAGCCCGCCGATGGCCAT
GAGGCACAGGGCGCGGTCCTCCCCCACCTCCCCGCTCACCCCGTCCTCCAGCACCAGGTA
ACCGACCGTCGGCCGCCCCTCATTGCCTTGCCCCCTCTCTCTGGTACTGGCTTCCGGGAT
TTGCGGCCTTGCGGGCCCGCCTTCGGATACGTCTACCGCCAGTTCTCGTTCGTGTGAATT
TGTTGGCACCGGTGCTCGGTGCTCGCTGCAGCTAGCTTCCGGGGTGGCGGAATCTCGCGC
TGATTCCTGATTGATTCGTTCGGCGCAAAGGGAGGAATCTTTTTGGCGCTCTGGCTTGTC
TTTGATTTTGTTCTTGATGCTGCTGCTTGGATATGCTGTCAGTTTAAAGGAGCTGAGCTT
CCCGGTGATTAGATTCTTCGAGCAAAAGCTCGTGGAAATACTCCTCGGCGATGGCTTTGA
GCCTGCATTTGGAAGCAGCTCAGGCCCTTTGGTCGTTCGTTCAGCAGCATAAGATTAGTG
AGCGCATGAAAAAACAAAACTGCGTAACTGAAAAAAAGGTTGGGTGCCCCTGTGGTATTC
GTCCAGATTCTTCAACTGATGTTCGATTGCGAATTTGGAAACTGAAAAGCTGTAGTACCA
GATAAGGACGACAGGGATGCGTGTGAAGCGTGAACAAGTCAGAAATCGTTTGGATTTCCA
TTTTCCCTTTTTTCCTGAAAAACTGAAAAAGCTGTAGTACCAGATAAGATAAAACCGTCA
GCGAGCGAGATCCCGACGCCCTCTGCGGCCATTGACCGGCGTGCACCCCCTATGGAAGAT
GGTGATCTCAGCATCAACAAGTGCTTGGTGCTCGTGCAATCGGCGTTGACGTTCCCGCCG
CCCCACTTTCTGGGTGGGCAGGGGAAAGAAAAGCCAGGTAGCAGAAGCTGCGGCCACGAT
TCTGAATTCTGATAGGGGGAAAAGGTTTTAAGGATGTGAGCTGCACTCAGGCAGTCCTTG
AGATTATGCTGTACCTTTTAGTAATTTTTTTTGGGTTTGACAAGCACGTTGTTGTTGTTT
TTGTTGAGTGGACACCCACTTTCTTCTCACGGGTCAAGCTTCTTCATTCTCCATTCCTGG
GAAAAAGTTGTGATCTTTGTCCTATCTTTTGTTATTCTCTACTAGTAGGGAATCCCTACT
AGAAGTAGTAGTTGGCTTGAGCCAATCGCTAATTTGAGGACAATATCTATGTTTTGATCT
ATGGATAACCATGTCGATTCAAGATTGAGCTTGCCTTTTTGTGACACTAAATAGTAATGA
TCATCACCACTGTCATTCCAGGTCGCCTTTTTTTTTGTGACACTAAATAGTAATGAGCAT
CAAAAGGATACCCTTTTAGATACTTTTTCTTAGCACATCCAATCTCTCATATCATCCACT
GAATCAGATAGTGAGTGGCGTGAAGATTTTAATGTCAAGGGAACTGAGCCACCTGAGATT
GTTCAGCCTACTATGCACGTTAGCACCATCTATGTTTGCTCTGTCATGAATTTGTGATTA
GATTTGGTGGTGGGCCTGATTTTCGTTGTGGTAAGGTACATGTTTTAACACTAAGACAGT
ACCACTATAAATGTGCTAATAATTGATAACCAACCCTGCCCCGAAGAAAAGTACGACCAA
GCCATCTGTTTATTGTAACTAATAGTTAGTTGTTAATAAGTGTATAATCCTAGCCACTCA
TCTAACATTACGTGATATGCACCCAAGAACTTTCTGTTGGGCCCAATAAATTTAATGAAC
TCGGTGTTTCTTTACAAGAGAGTTTTTCTAGGGCAACTGTAACAATCAGAATCACGAAGG
AGATTTTTCTACAAGTAATTAATTGTTTGAACTGTATCTACAACTTACAAGATGCAGTAA
TAATAAATAATTCCCCTCGTATTGGAGCTCTCCAATTTGTGCTATGCTATCAGTTCATAT
CAAGGAACAGAACTTTCTGGCTATCTACCTTCAGTTCATACTTCTGATAGCATGGTGCTC
TATTCTAATTATATGAGTGTTCAAATGGAAATAAGATGTTTTATGTCGAGGACTGCTGAG
AAATTTGAGACATGTTGTCATCTCCGAACAAAATTTTACGTTTGCGCAATCTCTGGTGCC
ACACATTGAGTAGTCAGCAATGATTATCATTTCGTTTTAGTTGGATGCAGAGGATTCTGA
AATAAGTAAGTGATGCTTAGTATGTACCTTCATCTTCTACTTTGCATCCTGGCAAGAATA
TTGCATCAAATTCTGAGCTGTACTAGAGAATATACTGTTACATCATCTATCATAACACTG
GTATTTTTTTCTTTTCTTTTCTTGCAGAACAAAGAAGATACTTGGTTTCTCTGTATCTCT
CATCCTCATCAATCTGGCTTCAATTATGGAGCGTGCTGATGAGAATCTCCTTCCAGCAGT
TTACAAGGAAGTCAGTGCAGCCTTCAATGCTGGTCCTACTGATCTGGGATACCTCACCTT
TGCAATGAACTTTCTGAAGTCAATAGCATCTCCCTTGGCAGGTATCCTTGCTCTGCACTA
TGATCGGCCAACAGTGCTTGCAATAGGGACTGTTTTCTGGGCCTTATCAACGGCGGCTGT
CGGTGTTAGCCAACATTTTGGGCAGGTTGCATTCTGGAGAGCTGTAAATGGCCTTGGGCT
TGCCATTGTAATACCAGCGCTTCAGTCGTTCATTGCTGATAGCTATAAAGATGGTACACG
TGGTGCAGGATTCGGTTTGTTAAGCCTCATTGGTGCTGTAGGTGGTATAGGTGGTAGTAT
TTTGGCAACAATCATGGCTGGAAAGGACTATTGGGGATTCCCTGGATGGCGTGTTGCATT
CATGATGGTCGCACTAGTCAGCTTGATAATTGGAATTCTTGTGTACTTATATGCAACTGA
TCCAAGAAGAATACCTGGCAATCGCCTTCTTGATGAAGATGACTATGAGAGGTTGCATTT
ATCAAGCAAAGATGTTCTTCCTCCACCTTCTATCTGGAGGGATTCTTGGGTGGCAACAAG
ATCTGTTATGAAAGTGAAGACATTTCAGATCATTGTCCTGCAAGGGATCATTGGCTCATT
GCCATGGACTGCTATAGTTTTCTTCACAATGTGGTTTGAACTCATTGGTTTTGACAACAA
AAGCTCGGCAGCACTGAACAGCCTCTTCGCCATCGGGTGTGCCAGCGGAGCATTTCTTGG
CGGAGTGATAGCAGACCACCTGTCAAAGTACTTTCCAGATTCGGCACGTGTCATGTGCGC
CCAGTTCAGTGCCTTCATGGGCATCCCGTTCTCTTGGATCCTCCTCACAGTCATCCCCCA
GTCAGTTGACTACTGGTATGCCTTCGCCGTCACACTTTTCTTCATGGGCATCACGATAAG
CTGGTGCGCCACCTCGGCAAACAACCCCATGTTTGCTGAGGTGGTCCCTCCCAAGCACCG
CACCATGATCTACGCCTTCGACCGTGCGTTCGAGGGCTCATTCGCCTCGCTGGCTGCCCC
CGCAGTGGGCCTAGTCACCGAGAAGATTTATGGCTATGATACCAAGACTGTGAACCTTGC
GAACGGATCAGCAGAAGGGGCGTACGCACTCTCAAGAGGGCTGCTGACCATGATGACCGT
GCCTTTCGGTGTTTGTGTCCTGTTCTACAGCCCACTGTACCTTGTGTTCAAGCACGACAG
AGAGAACGCGAAACTCACCAGCTTCAAGGAGCAGGAGCTAGTGTGATGATATGAATGCGC
TGCCTTGATCAGCATTCGGAACCTCTCGGCATCCCGAGCAGGAGCTTGTGTGATGATCTG
AAGATACTGCCTTGATCAGCATTCAGAACATCTGGTCATACCGTCCTGGGTCATTCTGAG
TTTCTGATTGAGATTCTGGCAATTGTGCCACGGAGAGAAGTGTGGAGCAACAATTGTTCT
GGCCGATTTGAAGATTATAAGGCGACCTTCTTTTTTTGTGCCCATCCAACAAGCCATTTT
TCTATGGCTTCTCTTGGTGATGAGTGATTTGTGTTGTGGAGGTTTTTTTTTTACAGAGAA
CCCCAGAGAAGGCATATGACATGACCTGAAGCCCTGAACTATGCTGAATTGCTGATGTTA
CATGTAGTTGCCTTGGTAGTTAAACAGATCACTAATAATGTTTCACTGATCGCTGGGATC
AGCTCGTTTTCAGTTATCTTTCTGGGGTTTTTTTAAGAAACTCTGGAAATTTTGTATCAG
TTGATTATGAAAGAAGTTCTAGCAGTTTGGTT