Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88524
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:4812331:4817257:1 gene:SORBI_3002G050700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAACATGCAGGACTCGCCAGTTTTCAGCTTCCTCAACAACCTGTCGCCGATCGAGCCT
CTCAAGTCGGCTTACAACACGAACAGCCTCCAAGGGTTTCAGTCCATCAACATAACGTCC
ATTTCCTCAATCTTCACTTCTCCGCATGACAATGTGAACAAGGAACCGAGGCTCCCAAAG
AGTTCACTTGGTGACATTTCTGAAAACGAGGTTTGTGCTGACGGCGCTGATACAAACAAG
CCATCCAAGTCTTCAAATGCTGTTAGGTTGTTTGCCTGCACTAGCACTGTGACTCGAGAA
ACCCACTCTGTTACTTGTTCCGGTGTAGTTGATCCTCCAACTGGGCCATGTGATTTGGCT
CAACCTGGTCAGTTCGATAATGGCAGTCCAGACCATAACACGACACCCTGCCATGGTGTC
AGATCAGACCTTAAACTGGATAAGACTAGGAAGTTAGAAGCTGCACAAACTGTTAAAAAT
ACATTGGAGAAAAGGAAATGCTTGTTTTCCACTGATATCCAGCTCCTGGATGGCAGCAGC
GAGCCTGTGAATGACAATGATCAAGTCTTGGGATGTGAATGGTCCGACTTGATCTCCACA
ACCTCAGCTGAGCTTTTGGCCTTTGACTCCACGATGGATGAGCATCACAGAGGAGTGCAT
TTGGCAGCTAAAAACGCAGAATCATGTGGATATTTGCTATCAAAACTTACCGGAGATGGT
GACGTCTCAGACAGAGCACATCCTAGTGCATCTGGTCAGGTATACTATCAAGAACTTGTG
ATGGGAGAAGATCAGACAGAAAATGCTGAAATATTTCAGGATGGTCAAGAAACCATCTCA
ACTGAAGAAATTCAGGATAATATTTGTGAAGCGAATGGATGTCTTCCATTAGAGTACAAG
GTGGAGGGCCAACAACAACGTGGCGTACGAAGACGCTGCCTGGTTTTTGAGGCATCTGGG
TTTTCAAATAGTGTTGTGAAAAAAGGGACTGTTGAAAATCTCTCTGTCTCAACATGTAAA
GGCAAAAGTCCTGTACAAACCCAACCACGTGGATTGCGAGGCATCGGTCTACATTTGAAT
GCCCTTGCATTAACACCAAAAGGGAAAATGGCTTGTCAGGATCCTACAGCTTCTGCTTTG
CTTCCGTCATCAGCATCTGAAAAGGATGTGCATGGCAGGTTGCTTTCTGCAGGAGAGAAT
TTTACACATTCAGGTGGTGAACTGTTAGAATTCCCCGTGGATGATTGCTCAGCTGGAGGT
TTTCCTGTAAATGATCATGTTTCAGGTCAAAGTGTCAGCCCTCAAAAGAAGAGACGTAAA
ACAGATAATGGTGATGATGGTGAGGCATGCAAGCGATGCAGCTGTAAGAAGTCAAAGTGC
CTGAAACTTTATTGTGAGTGTTTTGCTGCTGGTGTATACTGCTCGGAACCTTGTTCATGT
CAAGGATGTCTGAACAAACCCATACATGAGGAAATTGTTCTCTCCACTCGGAAGCAGATA
GAGTTTCGTAATCCACTAGCGTTTGCTCCAAAAGTGATCCGTATGTCTGATGCTGGTCTG
GAAACTGGGGAAGATCCTAACAATACTCCAGCTTCAGCTCGTCACAAGAGAGGATGCAAT
TGCAAGAAGTCAAGCTGTCTCAAGAAATACTGTGAATGCTATCAGGGAGGTGTTGGATGC
TCCACCAACTGCAGATGTGAGAGTTGCAAAAATACTTTTGGCAGAAGAGATGCCGAGAGT
GAACTCACTGAAGAAATGAAACAAGAAAGTGAACAAACAGAAAATTGTTCACAAGAAAAG
GAGAATGGTCAACAAAAAGCAAATGTACAGAGCGAAGATCACCCCCTCCTTGACCTTGTC
CCAATAACACCTCCTTTTGATCTTTCCAGTTCTCTGCTCAAACTGCCAAATTTCTCAAGC
GCGAAACCACCGAGACCGTCCAAACCTCGCAGTGTGAACTCCCGTTCGTCTGCTTCGAAA
GCTACTGCAACAGTACAGCCTTGTAAATCGTCCAAGATTGCTGTTAGTGGTATCGATGAG
GAGATGCCAGATATTCTAAAAGAACCTAATTCTCCTAGTAACTGTGTCAAGACTACTTCA
CCCAATGGAAAACGGGTCTCACCGCCACATAATGCGCTCAGTGTTTCCCCAAACCGAAAA
GGTGGTAGGAAGTTGATACTGAAGTCAATTCCCTCATTTCCGTCACTTGCGGGAGACACA
ATCAGCGGTTCTGCAATGAACAACACTGATAGCACATTCAGCGTGTCACCTCTCACTTTA
GGACCATCCTAA

Peptide Sequence

PEP ID

OQU88524
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:4812331:4817257:1 gene:SORBI_3002G050700 transcript:OQU88524 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MNMQDSPVFSFLNNLSPIEPLKSAYNTNSLQGFQSINITSISSIFTSPHDNVNKEPRLPK
SSLGDISENEVCADGADTNKPSKSSNAVRLFACTSTVTRETHSVTCSGVVDPPTGPCDLA
QPGQFDNGSPDHNTTPCHGVRSDLKLDKTRKLEAAQTVKNTLEKRKCLFSTDIQLLDGSS
EPVNDNDQVLGCEWSDLISTTSAELLAFDSTMDEHHRGVHLAAKNAESCGYLLSKLTGDG
DVSDRAHPSASGQVYYQELVMGEDQTENAEIFQDGQETISTEEIQDNICEANGCLPLEYK
VEGQQQRGVRRRCLVFEASGFSNSVVKKGTVENLSVSTCKGKSPVQTQPRGLRGIGLHLN
ALALTPKGKMACQDPTASALLPSSASEKDVHGRLLSAGENFTHSGGELLEFPVDDCSAGG
FPVNDHVSGQSVSPQKKRRKTDNGDDGEACKRCSCKKSKCLKLYCECFAAGVYCSEPCSC
QGCLNKPIHEEIVLSTRKQIEFRNPLAFAPKVIRMSDAGLETGEDPNNTPASARHKRGCN
CKKSSCLKKYCECYQGGVGCSTNCRCESCKNTFGRRDAESELTEEMKQESEQTENCSQEK
ENGQQKANVQSEDHPLLDLVPITPPFDLSSSLLKLPNFSSAKPPRPSKPRSVNSRSSASK
ATATVQPCKSSKIAVSGIDEEMPDILKEPNSPSNCVKTTSPNGKRVSPPHNALSVSPNRK
GGRKLILKSIPSFPSLAGDTISGSAMNNTDSTFSVSPLTLGPS

Transcript Sequence

Transcript ID

OQU88524
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:4812331:4817257:1 gene:SORBI_3002G050700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTGCCTTGCAGCGAGCCACCGGAGCCGGATTCGCGGCCTCCTCACCGCTGCAGCGTCGGC
TTACCTTGCTCTGGCGAACAAAAATTTTAGGGCCTTCTAACCTATTCCGTTCCTCGCTCG
GCTGCTCGGCCGCAGTCGTAACCCCATGCGGCGCTACGGCGCTTGCTAGTTGCTTTTCGC
TTCTTCTCTTTCACATTGCCGTCAGGCGCCACCGGGCTGCCACGATTCCGTCGCAACCCG
GCAGAGCCTACACCAGCACCAGTGAGATGACAAGTGCCGTCCCAGATCTGCCTCACGAGC
GCGCTGTCACCTCACCTCGCCCCTGCAGAGGCCGCAGTTGGTACTAGTACGAGTAGATCC
CGTGAATATACTTCTGCAGAGGCCGCTCTGCCAACTGCGTCATGCGTACCTACCTTCTGC
AGAGCCAGATCCGTTCTACTCGGTGGTTTGACCTGGGATTTGCATTCATTAACCATTATT
AGCATCCCGTTTTAGAGCACATTTTTCTTTTCTGCACATGGTTCTTCTCCCCTCCTCTGC
TGCGAATTCGTCAACGCTGTGGTTGTGCACAAAACAAATGTACTACCTGCACTGCACTGC
ACACTCGTGCATTCTGCAGTATTAATTAAGTACTACCACTGATGTACCTGCGCTTCTTTG
GTGCTGAAATGGATGAACATGCAGGACTCGCCAGTTTTCAGCTTCCTCAACAACCTGTCG
CCGATCGAGCCTCTCAAGTCGGCTTACAACACGAACAGCCTCCAAGGGTTTCAGTCCATC
AACATAACGTCCATTTCCTCAATCTTCACTTCTCCGCATGACAATGTGAACAAGGAACCG
AGGCTCCCAAAGAGTTCACTTGGTGACATTTCTGAAAACGAGGTTTGTGCTGACGGCGCT
GATACAAACAAGCCATCCAAGTCTTCAAATGCTGTTAGGTTGTTTGCCTGCACTAGCACT
GTGACTCGAGAAACCCACTCTGTTACTTGTTCCGGTGTAGTTGATCCTCCAACTGGGCCA
TGTGATTTGGCTCAACCTGGTCAGTTCGATAATGGCAGTCCAGACCATAACACGACACCC
TGCCATGGTGTCAGATCAGACCTTAAACTGGATAAGACTAGGAAGTTAGAAGCTGCACAA
ACTGTTAAAAATACATTGGAGAAAAGGAAATGCTTGTTTTCCACTGATATCCAGCTCCTG
GATGGCAGCAGCGAGCCTGTGAATGACAATGATCAAGTCTTGGGATGTGAATGGTCCGAC
TTGATCTCCACAACCTCAGCTGAGCTTTTGGCCTTTGACTCCACGATGGATGAGCATCAC
AGAGGAGTGCATTTGGCAGCTAAAAACGCAGAATCATGTGGATATTTGCTATCAAAACTT
ACCGGAGATGGTGACGTCTCAGACAGAGCACATCCTAGTGCATCTGGTCAGGTATACTAT
CAAGAACTTGTGATGGGAGAAGATCAGACAGAAAATGCTGAAATATTTCAGGATGGTCAA
GAAACCATCTCAACTGAAGAAATTCAGGATAATATTTGTGAAGCGAATGGATGTCTTCCA
TTAGAGTACAAGGTGGAGGGCCAACAACAACGTGGCGTACGAAGACGCTGCCTGGTTTTT
GAGGCATCTGGGTTTTCAAATAGTGTTGTGAAAAAAGGGACTGTTGAAAATCTCTCTGTC
TCAACATGTAAAGGCAAAAGTCCTGTACAAACCCAACCACGTGGATTGCGAGGCATCGGT
CTACATTTGAATGCCCTTGCATTAACACCAAAAGGGAAAATGGCTTGTCAGGATCCTACA
GCTTCTGCTTTGCTTCCGTCATCAGCATCTGAAAAGGATGTGCATGGCAGGTTGCTTTCT
GCAGGAGAGAATTTTACACATTCAGGTGGTGAACTGTTAGAATTCCCCGTGGATGATTGC
TCAGCTGGAGGTTTTCCTGTAAATGATCATGTTTCAGGTCAAAGTGTCAGCCCTCAAAAG
AAGAGACGTAAAACAGATAATGGTGATGATGGTGAGGCATGCAAGCGATGCAGCTGTAAG
AAGTCAAAGTGCCTGAAACTTTATTGTGAGTGTTTTGCTGCTGGTGTATACTGCTCGGAA
CCTTGTTCATGTCAAGGATGTCTGAACAAACCCATACATGAGGAAATTGTTCTCTCCACT
CGGAAGCAGATAGAGTTTCGTAATCCACTAGCGTTTGCTCCAAAAGTGATCCGTATGTCT
GATGCTGGTCTGGAAACTGGGGAAGATCCTAACAATACTCCAGCTTCAGCTCGTCACAAG
AGAGGATGCAATTGCAAGAAGTCAAGCTGTCTCAAGAAATACTGTGAATGCTATCAGGGA
GGTGTTGGATGCTCCACCAACTGCAGATGTGAGAGTTGCAAAAATACTTTTGGCAGAAGA
GATGCCGAGAGTGAACTCACTGAAGAAATGAAACAAGAAAGTGAACAAACAGAAAATTGT
TCACAAGAAAAGGAGAATGGTCAACAAAAAGCAAATGTACAGAGCGAAGATCACCCCCTC
CTTGACCTTGTCCCAATAACACCTCCTTTTGATCTTTCCAGTTCTCTGCTCAAACTGCCA
AATTTCTCAAGCGCGAAACCACCGAGACCGTCCAAACCTCGCAGTGTGAACTCCCGTTCG
TCTGCTTCGAAAGCTACTGCAACAGTACAGCCTTGTAAATCGTCCAAGATTGCTGTTAGT
GGTATCGATGAGGAGATGCCAGATATTCTAAAAGAACCTAATTCTCCTAGTAACTGTGTC
AAGACTACTTCACCCAATGGAAAACGGGTCTCACCGCCACATAATGCGCTCAGTGTTTCC
CCAAACCGAAAAGGTGGTAGGAAGTTGATACTGAAGTCAATTCCCTCATTTCCGTCACTT
GCGGGAGACACAATCAGCGGTTCTGCAATGAACAACACTGATAGCACATTCAGCGTGTCA
CCTCTCACTTTAGGACCATCCTAAAGCTGTGAAGTTGGCCATGGGACCGGAGTACGACTT
GTAGTCCGAATATGTGCCTCACAATCTACGGCAAGGCTGGAGGTACCGTCAGACAATAGT
AAGTTAGATTTTAAGTTGTAGTAATCTGTTTTTGTAAAATATGGTAGCCCCAATAATCTG
TATGTAAGATGCTGTGATGCTTGAAGCTGTTATCTTTATTAAATTGTAGCAACATTACGA
ATCACCTCTTGAGTAGGTTTCATAAATCCAGTCCATGTTTATTTTTCAA