Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88522
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:4816981:4821331:-1 gene:SORBI_3002G050900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCACGGCAGAGGCACGATGAAGAAGGCGGCGGCTGCGTTCCTGGCGGCGCTGCTCCTG
TGGTCGGCGGTGGCGGCCGTCTCCGGGCAGCCGCAGCCGGGGCCGAACAACAAGCAGACG
GCGGACAACAACCCGCGGCTGCAGAAGGCGTACGTGGCGCTGCAAGCGCTGAAGCGGTCG
ATCACGGAGGACCCCAAGAACCTGACGGCGAACTGGTGTGGCCCCGACGTGTGCGCCTAC
TTCGGCGTCTACTGCACGACGGCGCCGGACGACCCGCACTCGCAGACCGTCGCCGGGCTC
GACCTCAACCACGGCGACCTCGCGGGGACGTTCCCGGAGGAGCTCGGCCTGCTCGCCGAC
CTCGCGCTCCTCCACCTCAACTCCAACCGCTTCGCCGGCGGCCTGCCGGAGTCGCTCCCC
AAGCTGCGCCTCCTCCACGAGCTCGACGTCAGCAACAACCGCCTCACCGGCGGGTTCCCG
CAGCACATCCTCTGCCTGCCCAACATCAAGTACGTCGACCTCCGGTTCAACAGCCTCTGC
GGCGCCGTCCCCGCCGCGCTGTTCGACAAGCCGCTCGACGCCATCTTCCTCAACGACAAC
CACTTCGACTTCGAGCTCCCCGACAACCTGGGCAACTCGCCGGCGTCGGTGGTGGTGCTG
GCAAACCTGCGCCTGCGCGGGTGCATCCCGGAGAGCATCGGCCGGATGGCGGGCACGCTC
AACGAGCTCGTCGTCCTCAACGCCGGCCTGCGGTCCTGCATCCCGCAGGAGGTCGGGTGG
TTGCGCGAGCTGACGGTCCTCGACCTCAGCTTCAACGAGCTGCAGGGGATGCTGCCGGAG
TCCATGGCGGGGATGCACGAGCTCCAGCAGCTCGACGTCGCGCACAACGAGCTGTGGGGG
CATATCCCCGAGGGCGTCTGCGCGCTGCCAAGCCTCAGGAACTTCACCTACTCGTACAAC
TACTTCTGCACCGAGCCGCGGCGGTGCCTCGACATCCGCCGCGTCGACGACCGGCAGAAC
TGCATCGCCGGACGGCCGGATCAGCGGCCGACAGACCAGTGCCTCGCCTTCCTGCACCGC
CCGCCGGTGCACTGCGACGAGCACGGCTGCTTCGGGCCGCCGACGCACTACTAG

Peptide Sequence

PEP ID

OQU88522
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:4816981:4821331:-1 gene:SORBI_3002G050900 transcript:OQU88522 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MHGRGTMKKAAAAFLAALLLWSAVAAVSGQPQPGPNNKQTADNNPRLQKAYVALQALKRS
ITEDPKNLTANWCGPDVCAYFGVYCTTAPDDPHSQTVAGLDLNHGDLAGTFPEELGLLAD
LALLHLNSNRFAGGLPESLPKLRLLHELDVSNNRLTGGFPQHILCLPNIKYVDLRFNSLC
GAVPAALFDKPLDAIFLNDNHFDFELPDNLGNSPASVVVLANLRLRGCIPESIGRMAGTL
NELVVLNAGLRSCIPQEVGWLRELTVLDLSFNELQGMLPESMAGMHELQQLDVAHNELWG
HIPEGVCALPSLRNFTYSYNYFCTEPRRCLDIRRVDDRQNCIAGRPDQRPTDQCLAFLHR
PPVHCDEHGCFGPPTHY

Transcript Sequence

Transcript ID

OQU88522
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:4816981:4821331:-1 gene:SORBI_3002G050900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAAAGATAAACACGCCCATATTTTGTACTGTACCGGATATAATCGTAATACGCCTCCTGC
ATGCTCAACGTCCGAAATATAATCATACGCTCAATCATCATTAACTAACCACATGACTCC
TACTCTACTACCTACAGTTGCCGTCCATATCGGCCATAAACTCGACAAGACACCCATGAA
AACCACCCAATCACAAAACACCAACCTTTAGCGCCCCCCCCCCCCCCCCCCAAAAAAAAA
AAAGTGTACAAAATTCCGCTGAAAACTACACCTTTCAAAAACAAAAACATATAAAAACAG
TACACACAGTCAACTTTACAAATGGCAAGTTGGCAACCAAAACGAAAACAGACTAAAAAA
TTTCACCAAAAAAAAAAATGTAACGCGCATAGTACTTCTACACGGAGCCGAAAGCGTGTG
CACGACTGACTTCCCCCCCAAACGCGCACCGTCGTCTTGTATATAAACACCGAATTCGCC
GAAACGCATCAGCAGCAGCAGCAGCAGCATTCATTCATTCACCACACAACAAACGCAAAC
CAGCAACTCCAACTCCAATCGAGCTCCTTCATCGTCGGCGAACGACCGCGACGACGGCAA
TGCACGGCAGAGGCACGATGAAGAAGGCGGCGGCTGCGTTCCTGGCGGCGCTGCTCCTGT
GGTCGGCGGTGGCGGCCGTCTCCGGGCAGCCGCAGCCGGGGCCGAACAACAAGCAGACGG
CGGACAACAACCCGCGGCTGCAGAAGGCGTACGTGGCGCTGCAAGCGCTGAAGCGGTCGA
TCACGGAGGACCCCAAGAACCTGACGGCGAACTGGTGTGGCCCCGACGTGTGCGCCTACT
TCGGCGTCTACTGCACGACGGCGCCGGACGACCCGCACTCGCAGACCGTCGCCGGGCTCG
ACCTCAACCACGGCGACCTCGCGGGGACGTTCCCGGAGGAGCTCGGCCTGCTCGCCGACC
TCGCGCTCCTCCACCTCAACTCCAACCGCTTCGCCGGCGGCCTGCCGGAGTCGCTCCCCA
AGCTGCGCCTCCTCCACGAGCTCGACGTCAGCAACAACCGCCTCACCGGCGGGTTCCCGC
AGCACATCCTCTGCCTGCCCAACATCAAGTACGTCGACCTCCGGTTCAACAGCCTCTGCG
GCGCCGTCCCCGCCGCGCTGTTCGACAAGCCGCTCGACGCCATCTTCCTCAACGACAACC
ACTTCGACTTCGAGCTCCCCGACAACCTGGGCAACTCGCCGGCGTCGGTGGTGGTGCTGG
CAAACCTGCGCCTGCGCGGGTGCATCCCGGAGAGCATCGGCCGGATGGCGGGCACGCTCA
ACGAGCTCGTCGTCCTCAACGCCGGCCTGCGGTCCTGCATCCCGCAGGAGGTCGGGTGGT
TGCGCGAGCTGACGGTCCTCGACCTCAGCTTCAACGAGCTGCAGGGGATGCTGCCGGAGT
CCATGGCGGGGATGCACGAGCTCCAGCAGCTCGACGTCGCGCACAACGAGCTGTGGGGGC
ATATCCCCGAGGGCGTCTGCGCGCTGCCAAGCCTCAGGAACTTCACCTACTCGTACAACT
ACTTCTGCACCGAGCCGCGGCGGTGCCTCGACATCCGCCGCGTCGACGACCGGCAGAACT
GCATCGCCGGACGGCCGGATCAGCGGCCGACAGACCAGTGCCTCGCCTTCCTGCACCGCC
CGCCGGTGCACTGCGACGAGCACGGCTGCTTCGGGCCGCCGACGCACTACTAGAGAGTGG
CGGCGGTGGGAGAGACAGAGAGAGGGAGACGCCGCCGGGCGCGTCGCCGGCTCGCCGCGC
CGGGACTTGTAAAATTGGTTGGTGGTGGGATGTGAGACCAACCGAAGAGGGTAAAATTCG
TAAACAGAAAACGACCGTATATATTATATACACTGTAATTCTTCTTTTTCCTTTCTCCTT
TCTTTTCTTTTCTTTTCACAGGAGTGGTATTGATTGGAGTATATGTTGGGATTGTAGACA
GAAATGATAGTGCATTTTACACTGTTAATTTAATTACCCACTGACCAATAATCTCTGTAC
TAGTACCACTTGAGAGTACAAATCCTTGTAACTTTTTTTTTCAACCGCTTTATTTCTTGT
CTTTTTTTTGGTAACTTTATTTCTTGGCTTGGAAGGGAGCTAACATAACATGATGCCATA
TAACAAACCCAATCAACCAACATTGATCAAGGAATAGAAGAAAGGTTCCTAACCGCAAGA
AAAGAAAGGTAGCAAGAACATCCATGAATATTTTATTCATTATAAAAAAATCATTAAGCA
GGAGGAAGACTAATAAAACAAAGCAGCCAGCAGGAATGAATAATCCAGGTCAGGGCCACC
AATGGTGAGAGGAATGAGTGGTGGCCTGCACAGCTGATTAGGATGGGGTCAAACAAGGAC
TGCCGAATTAAATAAAAGGCTGAAGATGCCCATCAAATGGCCTCCAGCTGCAAAGCAGAG
GAAGCTCCAAAGCTTCCAACCTTCCTCAGTTCCTCCTTCCCTCACTCCACATGTGCACAT
CACCTTGGCTGGCTCCAGCACACATGACACCGGTACACACTCCATTCAGATTACTGTTCA
ACTGCTGCATGTTCAGATGCATATATGCTGCTGTGTTCAATGCCAATGTCCTTGTCACAC
ACCCATCACGGACCAGACTGATTAAACAGCACATTTATATGTATATTTATATATATATGT
TATCTATATATAAACATAAATAAAGCCATTGAAGTGTACTCTAGAGAAAGAAAAGGGGAG
AGAAAGAGAGAGAGAGAGAGCTCGAGATACAACTGCTGCACCACTACTTTCAGCTCTGAT
GATCTAGGTTTATATTTATAGATATATGATGAGTGCCCAATAGGACACGGCGGTGAGACG
GTTTCCGGCGACGGCGACGGCGCTGAAGGGGAGAGAGAGATCCTGACGGCAACGTGCATG
GGCATGCAGACGACTGACGGTGAGGAGGAGTTCAGAAGAAGCCGCGGAGCAGTTGCCGTC
TGAAAAGCCGGCCGGTTGCGCGACAGCCTGGCTGGCGCGGGAATCAAACTTGGGCGAATA
CTGGACAAACGGTGAGGCCGTTTCAGGGAGAAAACGAGGTCCATTGAGGGTGAGCAGCTT
CATCACCTTAGGGGCCGCCATGCCATTATGCATCTTAGACATATGTTTGTTATTTGTTGA
TTGAATTGTTGTGTTAGGCCTGCCTGCTACTTGACATTAAACAAGATGCCAATTCAGGAT
GATGGATCACTGTTAGCACATCCATCCATCCTGTTTAAGCTAATCAGTTTCTTTTGGCAG
GTAGAGAGGGAGGTGCATGTATGTATATGTATATATAACATATGTGCATACCCTATGTCA
TATATCTATGTGTGTGTACATGGCTTTTAGTTATAGTCATGGTATCCAATAATGCAAGGC
AGACAGGCTAGCAGGTAGGCCTAATGCACTGTCTAATTGGCAGGCATGACACAGAGGAGA
ATGCAAAGGGTGCTTGCCCACCAAGGGACTCTGACAACGGCATATCAGCAACTAACATTA
CTCCAAGTCTCCAGCACACAGTTCTTTGGCACCTTAGAGTACAATTCTTCAGCGAACGTG
TAGTTGGTGCTGGAGCAGTTCTTTCTTCAAGACTTCAACAATCATCTGCCATTTGGTAAC
CGTTTTATGTTCTTCGACGACAAAACTCCTTTTTTCCGGATCATCAACAACCTCCACTTA
GCTGGGTGCTCAGAATTTTCATGGACCATGGATGCCGTGCAGAAGGTGTAGCTCTGTTCG
TGCCAGTTCAGGAATGGGGGAGCCTGACATCTCAACGCCCATTGCAACTGTTCTAAGACA
GCTCAGACTTCAGAGTATCACCCGTAACTTGTACATGAATGGGAATAGGAGGGCACATGC
TTGCAGGAAAGAGATACACGACCAACCTCAAACACAGCCTACGCTCAACACATGTCACGC
TCACACATGACTGCATGAGCTGTCTGATGAGGGGTTTAGTTTAATTGTTCACTGACAGAG
GTGGCTTCAGACATGGAAAAGAGTTTGCAATGGAAAACATGGACTGGAATCCTTTTGAAA
AATAAACATGGACTGGATTTATGAAACCTACTCAAGAGGTGATTCGTAATGTTGCTACAA
TTTAATAAAGATAACAGCTTCAAGCATCACAGCATCTTACATACAGATTATTGGGGCTAC
CATATTTTACAAAAACAGATTACTACAACTTAAAATCTAACTTACTATTGTCTGACGGTA
CCTCCAGCCTTGCCGTAGATTGTGAGGCACATATTCGGACTACAAGTCGTACTCCGGTCC
CATGGCCAACTTCACAGCTTTAGGATGGTCC