Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88410
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:2601814:2605391:1 gene:SORBI_3002G028400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGCCGCTCTCCCGCACTCCCACCTCCGCCTCCCGCTCCACACCCCAAGTCCCACC
TCCCGCCGTCGCCCCCGCCTTCGCCTGCCCTCCGTCGTCGCCGTCTCGCGCCTTCAGAAC
CCCACCACCACAACCCACCCAGTCCTGCCACCCCCGGCTCCGCCCCCCTCCGCGGCGCTC
CTCGCCGCCGAGGGCGCCTCCCTCGCGCCGCGCCGGGAGCCCCGCTTCCCGGGCTCGGTC
TCCTCTCCAACAAGCTCCGCCTCCGCCGGCCTCTCCGAGGCGGAGGACGCCGTCGTGCGC
CGCGCCCTCCAGGTGCGCCGCGCCGTCGCCGCCGAGGCGCTCGTGGCCGCGCTCGGCGGC
GGGAAGGTCGGCGGTCTGACTTACGTCAAGAACCTCATGTCGCGGATGGGCCCGTTCGTG
GACCGCGTCGTCGTCGAGGCCGCCGCGATGCGGCGGGACCGTCCCGACCTCGCCCACATG
TCCTTCAACGCCCGGGCAAAGGCGTACATCCTGGAGTCCGGCCTCGTCGAGCTAGTCAAG
TGGTTCAAGCACAATTCAATGACATATCCCCAAATCGCAAAAGTCGTTTGCGCATGTTCT
GGCGATTTGGGGAAAGTTAGGAGGATGATAAAGTGGCTAAGGTCCATTTATGTAAAAGGA
GACTTTTTGGGGCGCGTCCTTGCAAATGGTGGATCCTTCTTGAACCGAAGTTTTGAAGAA
CTGGAAGAGATTATCGGCTATTTGGAAAGCCATGGTGTCAGGAGAGATTGGATTGGTTAT
GTGGTCAGCAGATGTCCACAGCTGCTGAGCTTGCCAATGGATGAGTTGGAGACACGGGTC
AGGTTTTATACGGATTTGGGAATGGACGAGAAGGACTTTGGCACAATGGTCTATGATTAT
CCAAGAGTTCTTGGATTTTTAAGCCTGGAAGAGATGAACAGTAAGGTTCAATATTTGAAA
GAATTTGGTTTAAGCACTGAAGAACTTGGGAGGTTACTGGCTTTCAAGCCACAGCTCATG
GCCTGTAGCATTGAAGAAAGGTGGAAACCTCTTGTGAAATACCTGTATCACCTTAACATT
ACAAGGGATGGCATGAAACGAATGTTGATGGTCCAACCAACAATATTCTGTCTTGATTTG
GAGACAGTGATTGTACCAAAGGTACAATTTCTAATGGATATTGGTGTGAGGAGTGATGCA
ATCGGCAATGTGCTTGTGAAGTTCCCTCCTGTATTAACGTATAGCCTGTACAAGAAAATA
CGCCCAGTGGTTATATTCCTGCTGACGAAAGGTGGAGTAAAACAGGATGACATCGGAAAG
GTTATTGCCTTGGATCCACAGCTCTTGGGCTGTAGTATTGCCCATAAGCTAGAAGTTAGT
GTCAAGTACTTCCGGTCACTGGGCATCTACCACTTTGTGCTGGGTCAGATGATTGCCGAC
TTCCCAACACTTCTCAGATACAATGTGGATATCCTGAGACCAAAATACCAGTACTTGAGG
CGTGTAATGGTGCGGCCACTGAAGGACCTCATTGAATTTCCTCGGTTCTTCAGTTACTCC
CTGGAGGACAGGATAGAGCCTCGACACCAAACTTTGGTGGCGAACAGGATCAACATGAAG
CTGCGGTACATGCTGACTGGCTCTGACGAAGAGTTTGCACAGAGGGTGCGAGAGGCTGTC
GAGAGGAGAGCGAGATTTGAAGCTAGAAAGGCTTGTCCGGAGACATTTTCAGGTTCTTCA
GAGACATCCAGGGAAACAGAAGGTACAGTAGCACCAGCATGCCAAGATAGCATAGATGTG
GTGGATTAG

Peptide Sequence

PEP ID

OQU88410
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:2601814:2605391:1 gene:SORBI_3002G028400 transcript:OQU88410 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAALPHSHLRLPLHTPSPTSRRRPRLRLPSVVAVSRLQNPTTTTHPVLPPPAPPPSAAL
LAAEGASLAPRREPRFPGSVSSPTSSASAGLSEAEDAVVRRALQVRRAVAAEALVAALGG
GKVGGLTYVKNLMSRMGPFVDRVVVEAAAMRRDRPDLAHMSFNARAKAYILESGLVELVK
WFKHNSMTYPQIAKVVCACSGDLGKVRRMIKWLRSIYVKGDFLGRVLANGGSFLNRSFEE
LEEIIGYLESHGVRRDWIGYVVSRCPQLLSLPMDELETRVRFYTDLGMDEKDFGTMVYDY
PRVLGFLSLEEMNSKVQYLKEFGLSTEELGRLLAFKPQLMACSIEERWKPLVKYLYHLNI
TRDGMKRMLMVQPTIFCLDLETVIVPKVQFLMDIGVRSDAIGNVLVKFPPVLTYSLYKKI
RPVVIFLLTKGGVKQDDIGKVIALDPQLLGCSIAHKLEVSVKYFRSLGIYHFVLGQMIAD
FPTLLRYNVDILRPKYQYLRRVMVRPLKDLIEFPRFFSYSLEDRIEPRHQTLVANRINMK
LRYMLTGSDEEFAQRVREAVERRARFEARKACPETFSGSSETSRETEGTVAPACQDSIDV
VD

Transcript Sequence

Transcript ID

OQU88410
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:2601814:2605391:1 gene:SORBI_3002G028400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCTCCACCTCAGTCACACACTCCACTCCAATGGCCGCCGCTCTCCCGCACTCCCACCTCC
GCCTCCCGCTCCACACCCCAAGTCCCACCTCCCGCCGTCGCCCCCGCCTTCGCCTGCCCT
CCGTCGTCGCCGTCTCGCGCCTTCAGAACCCCACCACCACAACCCACCCAGTCCTGCCAC
CCCCGGCTCCGCCCCCCTCCGCGGCGCTCCTCGCCGCCGAGGGCGCCTCCCTCGCGCCGC
GCCGGGAGCCCCGCTTCCCGGGCTCGGTCTCCTCTCCAACAAGCTCCGCCTCCGCCGGCC
TCTCCGAGGCGGAGGACGCCGTCGTGCGCCGCGCCCTCCAGGTGCGCCGCGCCGTCGCCG
CCGAGGCGCTCGTGGCCGCGCTCGGCGGCGGGAAGGTCGGCGGTCTGACTTACGTCAAGA
ACCTCATGTCGCGGATGGGCCCGTTCGTGGACCGCGTCGTCGTCGAGGCCGCCGCGATGC
GGCGGGACCGTCCCGACCTCGCCCACATGTCCTTCAACGCCCGGGCAAAGGCGTACATCC
TGGAGTCCGGCCTCGTCGAGCTAGTCAAGTGGTTCAAGCACAATTCAATGACATATCCCC
AAATCGCAAAAGTCGTTTGCGCATGTTCTGGCGATTTGGGGAAAGTTAGGAGGATGATAA
AGTGGCTAAGGTCCATTTATGTAAAAGGAGACTTTTTGGGGCGCGTCCTTGCAAATGGTG
GATCCTTCTTGAACCGAAGTTTTGAAGAACTGGAAGAGATTATCGGCTATTTGGAAAGCC
ATGGTGTCAGGAGAGATTGGATTGGTTATGTGGTCAGCAGATGTCCACAGCTGCTGAGCT
TGCCAATGGATGAGTTGGAGACACGGGTCAGGTTTTATACGGATTTGGGAATGGACGAGA
AGGACTTTGGCACAATGGTCTATGATTATCCAAGAGTTCTTGGATTTTTAAGCCTGGAAG
AGATGAACAGTAAGGTTCAATATTTGAAAGAATTTGGTTTAAGCACTGAAGAACTTGGGA
GGTTACTGGCTTTCAAGCCACAGCTCATGGCCTGTAGCATTGAAGAAAGGTGGAAACCTC
TTGTGAAATACCTGTATCACCTTAACATTACAAGGGATGGCATGAAACGAATGTTGATGG
TCCAACCAACAATATTCTGTCTTGATTTGGAGACAGTGATTGTACCAAAGGTACAATTTC
TAATGGATATTGGTGTGAGGAGTGATGCAATCGGCAATGTGCTTGTGAAGTTCCCTCCTG
TATTAACGTATAGCCTGTACAAGAAAATACGCCCAGTGGTTATATTCCTGCTGACGAAAG
GTGGAGTAAAACAGGATGACATCGGAAAGGTTATTGCCTTGGATCCACAGCTCTTGGGCT
GTAGTATTGCCCATAAGCTAGAAGTTAGTGTCAAGTACTTCCGGTCACTGGGCATCTACC
ACTTTGTGCTGGGTCAGATGATTGCCGACTTCCCAACACTTCTCAGATACAATGTGGATA
TCCTGAGACCAAAATACCAGTACTTGAGGCGTGTAATGGTGCGGCCACTGAAGGACCTCA
TTGAATTTCCTCGGTTCTTCAGTTACTCCCTGGAGGACAGGATAGAGCCTCGACACCAAA
CTTTGGTGGCGAACAGGATCAACATGAAGCTGCGGTACATGCTGACTGGCTCTGACGAAG
AGTTTGCACAGAGGGTGCGAGAGGCTGTCGAGAGGAGAGCGAGATTTGAAGCTAGAAAGG
CTTGTCCGGAGACATTTTCAGGTTCTTCAGAGACATCCAGGGAAACAGAAGGTACAGTAG
CACCAGCATGCCAAGATAGCATAGATGTGGTGGATTAGATAGATGAACGCAGGTAGTTCT
GCAAAAACAAGCACAGCACAGCTTCCTTACCTTGTACCTGTACATGTTGTTCTGAAGGAA
AGAAAAATGAAACATATTTTACTGTG