Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88290
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:299829:302188:-1 gene:SORBI_3002G002000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACCATGATACTCCATTTTCGATTATACTGTATAACCCAAAATCAAAAGCTGAACAAG
GGACGGAGCCGGAGGAGGCCAGCAAGCCACCTCTGCTATGGCAACAAAAGGCGAGCAGAA
ACCCATTGCCGATGTAGGAACGGCAGCATCTTAGACAAGATGGATGCTTGCGTGGAGTGT
CCAGCCGCATACGGATACGGCTCGTCGTCCATGATGGAGAAGGCCACCAAATGGGACGCC
GCCAACCATTTGCATCGGATGAGGGGACTCCAGCTGGAGGACGACATCTTCTTCGCCTCG
CCGTCGCCTCTGCTGCTTCTGATGGAGGCGGAGCTGGAGAAGGCGCGAGGCCACGTCAGG
GATCTGGAGGACGAGCGGCGCGTCATGACCAAGCGGCTGGAGCGGTTCCTGCGGAGGCTG
GCCGACGACAAGGCGGCGTGGAAGGCCCGGGTCCGTGACAAGGCCCGCCACGCCGTGGCC
GCCCTCCGTGACGAGCTCGGCGCGGAGCGGAGGCACCGGCGGCAGCTGGAGCAGGCCAAC
GCCCGGCTGCTGCGCGACCTGGCGGACGCGCGGGCGTCGGCCAAGCAGCAGGCGCAGAGC
TACGAGATGGAGCGTAAGGCGCGGGAGCTGATGGAGGACGCCTGCTCCGAGCTCACGCGG
GAGGTGGAGGAGGACCAGGCCGAGGTGGAGCTGCTCCGCCGGGAGTGCCTGCGCATGCGG
GAGGAGATGGAGGAGGAGCGACGGATGCTGCAGATGGCCGAGGTGTGGCGGGAGGAGCGC
GTGCAGATGAAGCTCTCCGACGCCAAGCTCGCGCTCGACAACAAGTACACGCACCTCAAC
CGACTGCAGGCGGAGATGGAGGCCTTCCTCCGCAGCAAGGACGACGAGTCGGCCTCCCAC
TCCGCCGTGCTGCGGGAGGCGCGCCTCATCAGCGACGCCGCCGCCGCCACGAGCTCGTCT
CTGGTGAGGCCGAGGCGGAGCGCCGGGAGCAAGGACGACGGGCGCAGGTACCGCATCAGC
AGCCAAGCGAGCCCCGCGTCGTCCAAATCCAACGACATGCTGCAATCCGTCAGCCCCGCC
ACGGACCTGTTCTTGGCCAAGGCCGATGACGACGACGACATGTACGCCGACGGCGGCAGC
TCGGCCGACCTGGAGATGGATTCCTGCAGCTGGGTCGGCACCAGCGAACGCTCAGCTTCG
GTGGCCAATGGCAACGGCAACGGCGTCGGCAGCGGGGTGACGACGGAGGCTCGTTCGTCA
GGCGCGAGCCGCCGTTCGACTAAGAACACCGCGCTCATACGCAGGCTCTGGAGGTCGGCC
ATCACCGAGAGCAGGAACAAGACCGGGAGGACAGCTCCCGACGGTGGCAGCTGGTCGCCG
TCTTATTCGGAAGACAGGAGGAGGTCGAGCGTGACCGCGGAAGGGCCGCCGCCGCCTCCT
CCTCCTCCAGCCGTTGCAGGCGAGCAGTGCAGCTCGTCAGGCGGATCCGGATTGCCACAG
CCGCCGCAGCGGGGAGAGGGAGGGGGAGGGGGAGGCAAGCAGAAGCAGAAGCAGAAGCAG
AAGCAGAGCCTCAAGGAGAAGCTGATGGAGGCCAGGATGGACGATCACAAGCCCCTCCAT
GCGCTCGCCGTCAAGCAAAAACCTTGA

Peptide Sequence

PEP ID

OQU88290
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:299829:302188:-1 gene:SORBI_3002G002000 transcript:OQU88290 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTMILHFRLYCITQNQKLNKGRSRRRPASHLCYGNKRRAETHCRCRNGSILDKMDACVEC
PAAYGYGSSSMMEKATKWDAANHLHRMRGLQLEDDIFFASPSPLLLLMEAELEKARGHVR
DLEDERRVMTKRLERFLRRLADDKAAWKARVRDKARHAVAALRDELGAERRHRRQLEQAN
ARLLRDLADARASAKQQAQSYEMERKARELMEDACSELTREVEEDQAEVELLRRECLRMR
EEMEEERRMLQMAEVWREERVQMKLSDAKLALDNKYTHLNRLQAEMEAFLRSKDDESASH
SAVLREARLISDAAAATSSSLVRPRRSAGSKDDGRRYRISSQASPASSKSNDMLQSVSPA
TDLFLAKADDDDDMYADGGSSADLEMDSCSWVGTSERSASVANGNGNGVGSGVTTEARSS
GASRRSTKNTALIRRLWRSAITESRNKTGRTAPDGGSWSPSYSEDRRRSSVTAEGPPPPP
PPPAVAGEQCSSSGGSGLPQPPQRGEGGGGGGKQKQKQKQKQSLKEKLMEARMDDHKPLH
ALAVKQKP

Transcript Sequence

Transcript ID

OQU88290
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:299829:302188:-1 gene:SORBI_3002G002000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTGATGAATCATCTCCATGCCATGCGATCC
TTGTCCTCTGCTTCACCTGCGCGCCATTCCCAATATTCTCCTCTTCTCCCTGATTTGATT
TGTGTTGCTGCCCTCTTCATCTTTGCCGGATAGTATGTGCCTGTTCCATGGCTCCTTGTA
TTATATCGCTGCTTCCTTTTTGGAACATGGGAAATGGGGTCGGTGAGCATTCTCGCCAAA
AGCTGCTTCCTTTTTTGACTGAGGATATAGATCGTCCCAAAGATGTCTTTTCTTTTTTCC
TTTCTTATAGATATTATTTATTTACTTTTACTCATAAGTGATTCTGGGGGTTGGATCGTT
AGGCACGCATGTTCGGCACATCTGTTAGCAATAGCATCCGGGATTTGATTAATGGGGAAA
ACAAAAAAGATTGATTGCTGCAGATGACTTGCTAGTATTCCATTCCATTCCATTTGAAGC
AGAGCACGCTGTACTCCTGCTGCCCACCCCCATGACCATGATACTCCATTTTCGATTATA
CTGTATAACCCAAAATCAAAAGCTGAACAAGGGACGGAGCCGGAGGAGGCCAGCAAGCCA
CCTCTGCTATGGCAACAAAAGGCGAGCAGAAACCCATTGCCGATGTAGGAACGGCAGCAT
CTTAGACAAGATGGATGCTTGCGTGGAGTGTCCAGCCGCATACGGATACGGCTCGTCGTC
CATGATGGAGAAGGCCACCAAATGGGACGCCGCCAACCATTTGCATCGGATGAGGGGACT
CCAGCTGGAGGACGACATCTTCTTCGCCTCGCCGTCGCCTCTGCTGCTTCTGATGGAGGC
GGAGCTGGAGAAGGCGCGAGGCCACGTCAGGGATCTGGAGGACGAGCGGCGCGTCATGAC
CAAGCGGCTGGAGCGGTTCCTGCGGAGGCTGGCCGACGACAAGGCGGCGTGGAAGGCCCG
GGTCCGTGACAAGGCCCGCCACGCCGTGGCCGCCCTCCGTGACGAGCTCGGCGCGGAGCG
GAGGCACCGGCGGCAGCTGGAGCAGGCCAACGCCCGGCTGCTGCGCGACCTGGCGGACGC
GCGGGCGTCGGCCAAGCAGCAGGCGCAGAGCTACGAGATGGAGCGTAAGGCGCGGGAGCT
GATGGAGGACGCCTGCTCCGAGCTCACGCGGGAGGTGGAGGAGGACCAGGCCGAGGTGGA
GCTGCTCCGCCGGGAGTGCCTGCGCATGCGGGAGGAGATGGAGGAGGAGCGACGGATGCT
GCAGATGGCCGAGGTGTGGCGGGAGGAGCGCGTGCAGATGAAGCTCTCCGACGCCAAGCT
CGCGCTCGACAACAAGTACACGCACCTCAACCGACTGCAGGCGGAGATGGAGGCCTTCCT
CCGCAGCAAGGACGACGAGTCGGCCTCCCACTCCGCCGTGCTGCGGGAGGCGCGCCTCAT
CAGCGACGCCGCCGCCGCCACGAGCTCGTCTCTGGTGAGGCCGAGGCGGAGCGCCGGGAG
CAAGGACGACGGGCGCAGGTACCGCATCAGCAGCCAAGCGAGCCCCGCGTCGTCCAAATC
CAACGACATGCTGCAATCCGTCAGCCCCGCCACGGACCTGTTCTTGGCCAAGGCCGATGA
CGACGACGACATGTACGCCGACGGCGGCAGCTCGGCCGACCTGGAGATGGATTCCTGCAG
CTGGGTCGGCACCAGCGAACGCTCAGCTTCGGTGGCCAATGGCAACGGCAACGGCGTCGG
CAGCGGGGTGACGACGGAGGCTCGTTCGTCAGGCGCGAGCCGCCGTTCGACTAAGAACAC
CGCGCTCATACGCAGGCTCTGGAGGTCGGCCATCACCGAGAGCAGGAACAAGACCGGGAG
GACAGCTCCCGACGGTGGCAGCTGGTCGCCGTCTTATTCGGAAGACAGGAGGAGGTCGAG
CGTGACCGCGGAAGGGCCGCCGCCGCCTCCTCCTCCTCCAGCCGTTGCAGGCGAGCAGTG
CAGCTCGTCAGGCGGATCCGGATTGCCACAGCCGCCGCAGCGGGGAGAGGGAGGGGGAGG
GGGAGGCAAGCAGAAGCAGAAGCAGAAGCAGAAGCAGAGCCTCAAGGAGAAGCTGATGGA
GGCCAGGATGGACGATCACAAGCCCCTCCATGCGCTCGCCGTCAAGCAAAAACCTTGA