Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88285
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:159997:167105:-1 gene:SORBI_3002G001100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAATGCAGATGCCGCTTCTCCCCTCCCTCACCCTCTTCCTCTGCCTCTCGCTTCCG
CTGCTGCTACCACCTCGCACCGCCTCCGCCGTCTCTTCTTCCCCGTCCTTCTCCCTCGAC
TTCTTCCCCGCCGCCGGAGCCATCGCGCAGCTCGCCCTCTCCGGCGCCGCCACCGCCAAT
GCCACCTCCGGCGCCGTCTCCATGCCCATCCCCGGCGCGCGGGTCCAGTACAGGACCCCC
ATTGCCGCGTCCGCACTCAGGCTCGGATTCTCCACCTACTTCTCCTTCGCCCTCCCTTCC
GCCCCCACCTCCTCCCTCGCCTTCTTCCTCACGCCCTCCGCCAGCTCCGCCTCTCGCACG
CCCCCGGTCCTCGCTCTCGTCTTCTCCGCGCGCTACATCCGCCTCGACCTCGCCGGCCGC
ACCGCTCTCCAGACGGAGACGCACCACCCCGTTCCCACCACCCCAAGCCTCCAGCTGCTG
CACCTGCACGCCTGGATAGACTACTACCACACCAACTCTTCTTCTTCTTCTTCCAATCCC
GCCACGGACACGCTCCACGTCCGGCTCGCCGCCACGCGTGTCCCCACCGCCACCCACCAC
CCGACCCCGCCGCTCCTCTCCTACCCGCTCCATCTGCCCCGCGTCCTCCGCAGGGGCCCC
GTCCTCGCCGGATTCCGGACCTCCTCCGGGAACTGCACGCTCTTCACCTGGGCGTTCCGC
GCAGCTCCCAACCGGATGCACTCCCTGCCGCTCAACCCCGCCGACCTGCTCACCACGCCG
CCGCCAGAGCGCGTCGCCAGCGCCCGCGCCCCTGGCCCCGAACGCCGCTACAGCAGCCCC
TGGGGCGCCGCGCTGTCCCTGCTGCTCGCGGCCGCCGCCGGCGCAATGCTCACCTTCATC
GTGCTCTTCCTCTGGTACTCCGTGTCCAAGCGCCGGCCCGTCGCGCCGGTCGAGTACCCC
ATGCACCCCTCACACCTCGTCTACGAGAAGATTGTGCTCGTCGGGGTCAAGGACGACGTC
GCGGTTGCCGATTCCGCCGGGAACAAGTAG

Peptide Sequence

PEP ID

OQU88285
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:159997:167105:-1 gene:SORBI_3002G001100 transcript:OQU88285 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAMQMPLLPSLTLFLCLSLPLLLPPRTASAVSSSPSFSLDFFPAAGAIAQLALSGAATAN
ATSGAVSMPIPGARVQYRTPIAASALRLGFSTYFSFALPSAPTSSLAFFLTPSASSASRT
PPVLALVFSARYIRLDLAGRTALQTETHHPVPTTPSLQLLHLHAWIDYYHTNSSSSSSNP
ATDTLHVRLAATRVPTATHHPTPPLLSYPLHLPRVLRRGPVLAGFRTSSGNCTLFTWAFR
AAPNRMHSLPLNPADLLTTPPPERVASARAPGPERRYSSPWGAALSLLLAAAAGAMLTFI
VLFLWYSVSKRRPVAPVEYPMHPSHLVYEKIVLVGVKDDVAVADSAGNK

Transcript Sequence

Transcript ID

OQU88285
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:159997:167105:-1 gene:SORBI_3002G001100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAATGCAGATGCCGCTTCTCCCCTCCCTCACCCTCTTCCTCTGCCTCTCGCTTCCG
CTGCTGCTACCACCTCGCACCGCCTCCGCCGTCTCTTCTTCCCCGTCCTTCTCCCTCGAC
TTCTTCCCCGCCGCCGGAGCCATCGCGCAGCTCGCCCTCTCCGGCGCCGCCACCGCCAAT
GCCACCTCCGGCGCCGTCTCCATGCCCATCCCCGGCGCGCGGGTCCAGTACAGGACCCCC
ATTGCCGCGTCCGCACTCAGGCTCGGATTCTCCACCTACTTCTCCTTCGCCCTCCCTTCC
GCCCCCACCTCCTCCCTCGCCTTCTTCCTCACGCCCTCCGCCAGCTCCGCCTCTCGCACG
CCCCCGGTCCTCGCTCTCGTCTTCTCCGCGCGCTACATCCGCCTCGACCTCGCCGGCCGC
ACCGCTCTCCAGACGGAGACGCACCACCCCGTTCCCACCACCCCAAGCCTCCAGCTGCTG
CACCTGCACGCCTGGATAGACTACTACCACACCAACTCTTCTTCTTCTTCTTCCAATCCC
GCCACGGACACGCTCCACGTCCGGCTCGCCGCCACGCGTGTCCCCACCGCCACCCACCAC
CCGACCCCGCCGCTCCTCTCCTACCCGCTCCATCTGCCCCGCGTCCTCCGCAGGGGCCCC
GTCCTCGCCGGATTCCGGACCTCCTCCGGGAACTGCACGCTCTTCACCTGGGCGTTCCGC
GCAGCTCCCAACCGGATGCACTCCCTGCCGCTCAACCCCGCCGACCTGCTCACCACGCCG
CCGCCAGAGCGCGTCGCCAGCGCCCGCGCCCCTGGCCCCGAACGCCGCTACAGCAGCCCC
TGGGGCGCCGCGCTGTCCCTGCTGCTCGCGGCCGCCGCCGGCGCAATGCTCACCTTCATC
GTGCTCTTCCTCTGGTACTCCGTGTCCAAGCGCCGGCCCGTCGCGCCGGTCGAGTACCCC
ATGCACCCCTCACACCTCGTCTACGAGAAGATTGTGCTCGTCGGGGTCAAGGACGACGTC
GCGGTTGCCGATTCCGCCGGGAACAAGTAGATGCTACCACCACCACCACCGAAACCACGC
CTTCTGTTCTGCTGGTAACATCATCCAAGCAAGTAGATGCTATGCTGCCTTTCAACTTTT
TTTCTTGCTGTATTTTTTTTCCACTTCACTAGTTCACTTCTGCTGCATTTGAAATCGTGT
TGTAATTACTAGTACTAGTAAAGTAGTAAGTACCATCAGCCCACCGTGGTGGAAACTGCA
GATTTTGCCTCCCAAACACAATCGGGCAAACTCTGCACTTTCCACCCAAATTACCTCCAA
TTAGCTAGCCAGAAGAGTGCTTCTTTTTGTTTTTGTGATCTTTGTCCCTATTCAAATTGT
ATCACCGTTGGTACTGATGTATTTCCTTTCTTGCACTGATGCTGCTTAGTAATTTGCTTC
TGTACTTGCTAGTTGTGTTTCACTTATCTGCTCTAACAGACAAAACTGATCTTTCTTTTG
CTTGCATATAAATGCATACTAATCTTCACCATATATTGGTTCAATCGCCAATTCACCATG
GCTCTGTATTATACTGCTTCAAAATGGTAGCATTCTTCTGCCTCGCTACGTATCCTACAC
TGTGGTCACGTCATATGTTACATTAAATAAGCACATCCATAAATCACAGTAGGGCTCTTC
TTTTCTCTCCTCATTGGAGACTCATGCATTACATGTTTCTCTATTCATATTCCTTCTGCA
AGACCTCATCTGAGAGACATAAACTCCAAGCTGCTCCGTCTTCTGTGGTTCATCAACATC
TAGTTTCAGCCTACTAGTAGTGTTTAGCTTTTGATGTAGGGCTCCTCCCCGGCTCCAGCT
CCGGCTTCTCTAGACGAGCCCTACCAAAAGTTTTGTAGGAGGAGCCAAGTAAAAAACAAA
GGAGCCGGAAGAGCCCCTCAGGAGGAGCCCTGCCAAACACCCCTGTAGTCTCAAAGCAGC
ACCAACTCCAAGTTTGACCATGTTGATGGATCTCCCAAGTTGCCAACAAAGTGGGGGTAA
AGTCCAACTTGGAGCAAGGGACCTGCACTTTATATTCTTGGATAGAGGCCAAAGATTTGA
TTTAGACTTCTTTCGGTTAGCCAAAGTGACTTTGCATTATGATACCGTATGGGTGGAGAC
ACAGGACTATATATATGTTTTTCATAGTGCTGCTTTCAGTTGGGACTTGGGGACTACAAA
ACAGAATATGGAATCCATAGTTGCTCTTACCTTTTTCATGTTTGACACCTGAATTTTTCG
GATCATTGTGGCCTCATTTAATGCTACCAAATTAGGGTGCAAGTGCATTTTGATTGCCTT
TAGTTAGGATAATTGCGTTTTGGAACCAGATGCTGCTAGTAGTGGACCAGAGATATATGT
ATGTTATATACTCTATAGTGTCAGCCAGTGGCGGATCTAGTGTAGGTGCATGGGGGTACA
GCTGTACCCCCAAAATTTTTATAAAAAAACCTAAGTATGTATATCTATAAAACATTATAT
TTCTAAACACTTTATCAAATATCAATATCTTAAGCTTAAATGCTCATCTAAGAGGGAAAA
CAACCCGTGCATAGCATAGTAGCACTCTTTCTTCTACAACCTGGAGCCTAAATAAACCAG
ATAAAAATTATAGAACGAGTTATGAGAGATAAATATATAAAGTTGACTCTTTTTTCTTTC
CAAATCATCATTATATTATAGTTCTTTTGTGAAGTTTGAATCTCGATCTTGTTTAATTAA
TTTTATTTTCTTAGAACGGTCAAGGCATTACAAGAAATAGTGATTTTAGCTTTTTTATGG
ACTACACAATAAAGCACAAAAGATTTATTTTTCCACTTTGAATCACCCAAAAACTAATAT
GCTTATTATCAAGACCTTGACAATGACTATCTTTGTATGAATGTTGATGAATTGTATCCT
TAAATTCATATACCTAACTATTTATTGCTATTCGGTCGTCATCACTATATCATTAGCGAA
TTGCATCGCTCAGATCCGTACCCCCATGTTTGAAATCCTAGATCCGCCACTGGTGTCAGC
TGAGTTTGGTCATCATTAGTCATTAGTCTTGACAGCTGTTATACAGAATATTGTACATTT
GTACAAGAATATATGCATCAGTTGGTGAAAATCGTTTACCTTTTAAATGATGTGCTTTCG
CACCATGGCATAATGAATGCTATAATATTCGCTTTGGCCTTTGTTGTGAGAATCACATTC
AAGCTCCAGCTATATCGGGGTACCCAAAAGGAACAACCTTCTCGCCAGTCATTTTATCTC
GGGTTAAGAATATGGGAAAACACGTTTCTTTCTAAAACAACAGTGCTTTGGGGAACTTGT
AGAAAACAGAATATGGAATCCAGGATTGCTCTAATGCTCTTGGCTTTTTCTCCTCTTTTC
TTTCTGTGGAAATGTCTCCAGGGTGGAGAGATATTCGTGACCTGAATTTTTTGGTTCATC
GTGGCTTCACTCCATCCTGCAAAAATAAGGGTGCCAAAGAGCTTATTTGGAACCAACAGT
CGACCAACAGAGTCCAGGTGAGTAGCTGGGTTGACTTTCCGCTAGGAATTAGGATGATTG
CAGTTTGGAACCGGATGCTGCTAGTAGCGGGCAGGGATTGCATGTTTTATATTTTATATT
GTCAGCTGAGTGTGGTCATCATTAGTCATTGATCTTGACAACTGTTACCCAAGATATTGT
ACAAGAGTGCATCTTTTGGGAGAAAACTGTTTACCTTTTTAATGGTGAATTTTTGCACTA
TGGCACGATGAATCACCACAACATGCAAAATGATGTAAATTGTAATGTTTACTTTGGCCC
TTGTGTGATGGTCGAAGAGCTGCAGCTGCACAGCTGCACTACCACATAGCGGTTTAGCTG
CACTGCTGCAGGGGCTTGAAGCTGAAGTGATTACTGATTAGAGCCATTGAAGCTACAGCC
TCCGTGATGCTGTATTTTTCACTGTTCTTTTTGGTGGGCTGGTTGCTATGTGTTACTAGT
CACTCTGTCTGGAAAAGAATACAATTCTAGTGAGGTTTTGAGTCAAATTGTCTTAATTTT
GACTAAGTTTATATAAAAATATCAATATTTATAATACCAAATAAATATCACTAGATTTAT
TTTGAAATATATTTTCATAATACACATGTTCATTGTCATAAGTAGATGGTGATCACAAGT
ACCATCAGCTCACCATGGTGGAAACTGCAGATTTTGCCTCCCAAACACAACAGGGCAAAC
TCTGCTCTTTTTGTTTTTGTGATCTGTCCCTAATGAACTTGTAACACTGTTGCTACCAAT
GTGTTTCCTTTCTTGCACTGTTACTGCTTAGTACTCCTAATTTTGCTTCTGTACTTAGTT
GTGTTTCACTTCTCTGCTCTAATGGACAAAACTGATCCTTCTTTTCCTTGCATATAAATG
CATACTAATCTTCACCATAAATTGGTTCAATTGCCATTTCACCATGGCGTCGTATTATAC
TGCTTTGAAATGGTAGCATTCTTCTGTCGCGCTACATATCCTACGCTGTGGTCAGGTCAT
GTTAGTATGTTACAATAAGTTTGAGCACATTCATAGATCACAATTGGGCTCTTCTTTTCC
CTCGATGGAACACGAGGCATCACATGTTTCTCTATTCATGTTCCTTCTGCAAGACCTCCT
CTGATAGACATAAACTCCAAAAGCTGCTTTGTCTGCAGTGGTTTATCAGCATCAAGTCTT
GGCCTACTAGTAGTATTAGCGTCTGATGTAGTCACAAAGCAGATCCAGCTCCAAGTTTGA
CCATGTTGATAGATCTCTCTCAAGTTGCCAACAAAGTGGGGGTAAAGTCCAACTTGGAGC
AAGTGACCTGCATTTCATATTTCTAGATAGAGGCCAAAGATTTGATTTGGGATTCTTGCC
AAAGTGACTTTGCATTATGATACTCTATGGGAGGAGATACGAGGACTATATATATGTTTT
CCTAGTGCTGCTTTCAGTTGGGACTTGGGAACTACAAAACAGAATATGGAATCCAGGGTT
GCTCTTACCTTTTTCTTCCCTTTTCTTTCTGCTATAATAATTGGGCACCTGAATTTTTCG
GTTCATTGTGGCTTCATTTCGTGCTGCCAAAATCAGGGTGCAAGTGCATTTTTCCAACCC
ACGAAGTTCAGGTGAGTAGCTGAATTGCATTTAGTTAGGATTGTTGCCTTTTGGAACAGG
ATGCTGCTGGTAGCGGACTATGCCATATACTCTATAATGTCAGCTGACTGTGGTCATCAG
TAGTCATTAGTCTTGACAGTTATTGTACAGGCTATTGTACATTTGTACAAGAGTATATGC
ATCTGTTGAACAAAATTGTTTACCTTTTGAATGGTGTGCTTTAATATTTGCGTTGGCCCA
TGTTGTGACTTTGGGAATCACATTCAAGCTCCAGCATGGATGAATGGATGAGAAAACAAC
AGTGCCTTTTGGGACTACAAAACAGAATATGGAATCCAGGATTGCTTTTAGCTTTTTCTT
CCGTTCTATTTCTGTACAAGTGTCTCCACTCTCCAGGGTGGAGAGATATTTGACACCTCT
AATTTTTGGTTCATTATTCCAAGCGCATTTTTGCAACAAACAGTCGACAAACAGAATCCA
GTTGAGTAGCTGCTAGTACCCTGACCAGAGATTGTATGTTTTATATTCTACAATGTCAGC
TGGAGTGTGGTCATCATTAGTCATTGATCTTTTTGTTTTGGAACTCATTAGTGATTGTTC
TTGACAAGTGTTTTACCCAGGATATTGTACGAGAGTGCGTCTGTTGGGAGAAAACTGTTT
ACCTTTTTAATGGTGACTTTTTGCACTACGGAATGATGAATCACCACAATATGCAAGATG
ATGTAATGTTTCCTTTGGCCCTTATGTGCTGATGATCCTCTTTTTTTTGAGAACTTATGT
GCTGGTGATCGGGAGAGCTGCGGCTGCACAGTTTTAGCAACAGTATCACGTAGGTGTTTA
GCTGCAGCCGCAGCGCCTTGAAGCAGATAAGAGCCATTGATGTTGTATTTTTTTTCCCTC
CTGGGTGGTTGCTATGGCTCTTCCAAACTACAAGACGTTATAATTTTTCTTAATATGTAC
ATTTTACTATATAACTAGATATAGTGTCTATCTAAATGCATATCGAAATCTATATATCTC
GAAAAAAATGTTTTATAATTTGAAATAGAGGGAGCATTACGCTGGTTACGTATCTTTCAA
AAGAAAAGATCTCGCGTGATGAGTGGGCATCTGAAATGAGTCAAATATTCCTGCCTTGAT
GATGGATGGGCAGCCACTAGTGAGCCCTGACTTTGGTAAATGCTGCTTTTGCAGGATGGG
CTTTCTTGATCCTGTGCACTGCAGGCAGGCATGATACATGAATATATATTCATATGCCTA
TTGCTATTGGTGACGGCAGTCTCACCTGTGACTATGACCTGGAGAAGTCTGAACTACGTA
CAAGTGCACATCACAATCCACATATGATCGTCTCTTACTTGTTTATCCTATTTATTTACT
TGTGCGCATGGATTCTCTAACTTTGTTAGTTTCAATTTCATCTAGTCGTCATTTCTTTTC
TGTTTTTACCTTTTTGGACCATTGAATCCGATTGTGTCAAGAAAAAAGATTCCTTTTTGC
ATGCTTATATACTAGCATTTATATAGACAGTATGATATGGTATGTGTTCGAGAAGGGAAT
TGATTAGAAAGTGTAATACGAGTGTTTAAATTGGCTCAAACATATGTAGTTCAACACCCT
TTCTTTTTTGCGAAGATTTATAATATGAAATAGAAAGTTTCCTTTTTCTTTTCTTTGCTT
TTGGTTTGTCATCTTGGGAAGTACTAGAAGTAGCGATCAACCAATGAATGGGCTTTGCTG
TTTCATTCAGTTTTTTAAGGGAGAATGGACTTGTGGCCGAGAAATGTAACTGAAGCAGGT
GATATTTTGGTGTGTGTTCATGGACCTGAGCACCGGTAATGTCATGCCTTTTCACAACGT
ATCTGTTTGATGATATTTTCTTTTTTTATAGGTGGCACTTTGTCCTGATCTCTCTTTTAT
CTCTCGGTGCTTCAGTGCTTGTGTGCGTG