Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88271
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:74260170:74264260:-1 gene:SORBI_3003G444300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGACGCCGCCGCCGATCTGCGCCGGAGGATAAAGGAGCAGCGCGCCGCCATCAAG
CGCCGGATCACTGACTCCCGGGACCGCACCGCCGCCGCCTCCTCCACCTTCAACGCCGCC
CTCCTCGAGGCGCGCTCCATCGCCAACCAGACTGTCTCCAACCGAGCAAAACTCAGCCAA
CAAAAACAACACCTCCGGAAATTAGAATCAGATCTAGCACAGGCCCTCTCCGTCCAAACA
AGCAGAATGTCAAATCATAAGCTCATGACTGAGTCAATTTCAAACACCATTGCAACAAAT
GAGCAGCTCAGACGCTTGGTTATGGACCGTAGGGCTACAAGAGATGCATGCATGAATGCC
ATATCAAATCAACTCAAAGATATTGAATCCCTTGAAGCTGAGAGTGACGCAGATGGGGAT
AAGAACCTAGAGAATTCTCTCATGTGGTACGATAAGTTTCTTGGTTTCCAAGTTGTTGGA
GGAGAAGGGGTGAAATTTGTGTTCAACAAAATTGATGTGCAAAGTCCTGACAAGGAGTAT
TCTTTTTGCGTAAAGCTTGTTGAAGAAAGATACGTCTTAGTCCGGTGTGTTCCCTTTGTG
GATGGCATTGAAGAATTGGTGAAGGAACTTAACTGCAACAATGATCTGTACAAATTTGTG
AGGTTCATGAGAAACAGGTTCCAAGCTGCTACAATCAGTGGAAATCAATTGTCAAGCTCC
TTTTGCCCTGAGGTATTATCCATAACATCTTCATCACCAGCATTATCAGTGGATTCCAGA
AGTGAAAATGGCATTGATCGAAGTCATACACAAGGAACCCTGCTAAAGTTGGCACCGAAC
GGCTGGCCTCGTAATATAGCAAATTCATCTGCGGCTGGGCAAACTGAATAG

Peptide Sequence

PEP ID

OQU88271
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:74260170:74264260:-1 gene:SORBI_3003G444300 transcript:OQU88271 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MADAAADLRRRIKEQRAAIKRRITDSRDRTAAASSTFNAALLEARSIANQTVSNRAKLSQ
QKQHLRKLESDLAQALSVQTSRMSNHKLMTESISNTIATNEQLRRLVMDRRATRDACMNA
ISNQLKDIESLEAESDADGDKNLENSLMWYDKFLGFQVVGGEGVKFVFNKIDVQSPDKEY
SFCVKLVEERYVLVRCVPFVDGIEELVKELNCNNDLYKFVRFMRNRFQAATISGNQLSSS
FCPEVLSITSSSPALSVDSRSENGIDRSHTQGTLLKLAPNGWPRNIANSSAAGQTE

Transcript Sequence

Transcript ID

OQU88271
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:74260170:74264260:-1 gene:SORBI_3003G444300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGAAATTCGAACTCGAGGCTCCTCCAGCCACTCCGCTTCTCCAACGCCTAGCCGCCCCCG
CAGCAGCCATGGCGGACGCCGCCGCCGATCTGCGCCGGAGGATAAAGGAGCAGCGCGCCG
CCATCAAGCGCCGGATCACTGACTCCCGGGACCGCACCGCCGCCGCCTCCTCCACCTTCA
ACGCCGCCCTCCTCGAGGCGCGCTCCATCGCCAACCAGACTGTCTCCAACCGAGCAAAAC
TCAGCCAACAAAAACAACACCTCCGGAAATTAGAATCAGATCTAGCACAGGCCCTCTCCG
TCCAAACAAGCAGAATGTCAAATCATAAGCTCATGACTGAGTCAATTTCAAACACCATTG
CAACAAATGAGCAGCTCAGACGCTTGGTTATGGACCGTAGGGCTACAAGAGATGCATGCA
TGAATGCCATATCAAATCAACTCAAAGATATTGAATCCCTTGAAGCTGAGAGTGACGCAG
ATGGGGATAAGAACCTAGAGAATTCTCTCATGTGGTACGATAAGTTTCTTGGTTTCCAAG
TTGTTGGAGGAGAAGGGGTGAAATTTGTGTTCAACAAAATTGATGTGCAAAGTCCTGACA
AGGAGTATTCTTTTTGCGTAAAGCTTGTTGAAGAAAGATACGTCTTAGTCCGGTGTGTTC
CCTTTGTGGATGGCATTGAAGAATTGGTGAAGGAACTTAACTGCAACAATGATCTGTACA
AATTTGTGAGGTTCATGAGAAACAGGTTCCAAGCTGCTACAATCAGTGGAAATCAATTGT
CAAGCTCCTTTTGCCCTGAGGTATTATCCATAACATCTTCATCACCAGCATTATCAGTGG
ATTCCAGAAGTGAAAATGGCATTGATCGAAGTCATACACAAGGAACCCTGCTAAAGTTGG
CACCGAACGGCTGGCCTCGTAATATAGCAAATTCATCTGCGGCTGGGCAAACTGAATAGC
AGGCAACGGGATTTACAGGGGATTCTCCATGTCAACATGCTATTTACTCTGCCCAATAGC
ATTGGGCCGCGGAGATCTGTACAGTAAAAGTTAAAGCACTTTGTATAATGTTGTCTGCTG
CTTGCATTTCTGACTCAGAACTCGTGTTGTACTTGTACCTCAGTGTTCTTTTTTTGATGG
AACTACCCAATTGTTGCTGTTTGTAACTTTGTATTACCTATCATTCTTCATATTCATGGT
AATGTGTATAAGCGTTTGAACCTTGTATGTGCTCTTACATGTTGAAATGGCTTACATATT
GGCCAGACAACAATGCCTAAATGGTCCACAAAAATAAAGTGACGTCTGGTTTCAGGATGA
GTCACTGGAGGACTTGTGCCCAGCACTCTACAGCCACTGCAATGAGAAGGACTGCACTGT
CGCACAAATGTTCAGCATTGGTCTGCAGAACTCGTTGGTGCCAAGGCTCACTGCGAGGGC
AACATCTCAATTGCATCTTGTACAGCAGCTTCTGGGAGGTGTACACCTGGACGACTCGAC
AGACAAGAGACTCTCGGTCTTCAGCAAGGGGGAGGTTGGCCTTGACACCGGCGCCCTGTA
CAGACTCCTCAAATCCAGGGGACAACGCAATGATCTCGGGGCCAATTTTGTCTGGAAAAA
CTCTGCTCCACCGCGGGTGCAATTGTTCATGTGGCTCCTAGTCCAGGGAAGGATTCAAAG
CAGGTCTCTACTACGCAAAAAACATATTGTGCAAGACTCAACCTGTGAGGTGTGCAATGC
GAGCGAAGAAACCCCGGAGCATATCATTGGTGGCTGTGCAATCGCTGTAAGTTTCTGGGC
TCGTCTGAACCTCAACTCTATGATAGGAATCCAGCTTCAAAACCTTCAGTCGGTTACCCC
ACCTCCTGGGTTTCCCGTTGACGAATTTTCGGCCTTCCTAGCGCTCGCGTGCTGGGAAAT
TTGAAAAGTCCGAAATGCTAAGGTATCAGGCAAGAAAGCATCTCAGCAGTCCAACTTCTC
AACCGTTGCAAATCCTCTGCCCAACTTTGGAGCCACAGATTCTCAGCTAAGAAAAGACAT
ACCCCAGTCTTGGTGCAGCTATTTCGAAATGGCTAGTTCAGGCCAAGGATAGTTAGATTG
ATTAGTTTGTTTGTGTTCTGAGGTGCTGTGGTTTCCACAAACACCCCCCCCCCTCCATCA
CCATCTAGGTGATCTGTGATCTGAAAACTTGTATTAC