Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88173
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:72536605:72541737:-1 gene:SORBI_3003G420300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGAAGGACGCCGGCGAGGCGCAGCAGCCGCCGGACGGGGCGGGCGGCGGCGCAGGC
GGAGGCGCAGGAGGAAGCAGGGCCGGTAGCGCCCGCCGCTTCTGCTGCTGCGGAGGCGGA
GGAGGAGCGGCGGCGAGGGTGGTTCGGCTGCAATGCGTGGCGGCGCTCGTGCTCGGGGTG
GCCGTGCTGCTGTCGGCGCTCTTCTGGCTCCCGCCCTTCGCGGGGCGGGGCGGCGCCAAG
GAGGGCCCGGATCCGGGCGACGAGTTCGGAGTGGCAAGCTTTAGGCTACACAAGACAGTT
CCTGAGCTGAGTGGAAATAAATCCCAGCTTGAACTGGATATATATGAGGAAGTTGGCATT
CCTAATTCCACGGTGGTTGTGAATATGCTACATCCATTAGATGGATCAAACTGGACAAAC
ATCATCTTCAACATTGTTCCTTTCCCAGAGAACATGACTATATCATCAACATGGTTGAGC
ATTCTTAGATCAAAGTTCATGTCCTTGGTTGTACGGCAGTCAACAATCCACTTGACTGAA
CCTCTATTTGGGAATTCATCATCCTTTGAAGTAATTAAATTTCCAGGAGGAATAACAATC
ATCCCTCCACAAACTGCTTTTCTTCTTCAGAAGCCCCATGCTACCTTTAATTTTACTCTG
AACTATCCGATCTACAAATTACAAGACAGAACCAACGAGTTAAAGGATCAAATGAAGGCA
GGACTACTACTCAATCCATACGAGAATCTGTATATCAAATTGACAAATTCACAAGGTTCA
ACGATTCTCCCTCCAACAATTGTTGAGACCTCCATTGTCCCCAAAGTTGGAAATAACCAG
CCATCTGTACCAAGGATGAAGCAGTTAGCACGAACAATTACCAATTCATCGTCATCCTCG
GGAAACTTGGGTCTGAATCATACAGTATTTGGCAGGGTAAAGCAGATTAGCCTTTCATCC
TATCTCAGGCATTCCTTACATAGTGGAGGTGGTTCTGATGCACCAAGTCCTGCACCCATG
CATCATCATGGTCATCACGGCCATCATCACCATCACCACAGTCATTACGACAACAGGCAT
CCAGCTCCTGCTCCTGCTCCAGTACATTTTCCTGTGCCGCAACCCAGATATAGTGCTCCA
CCTCCATCTGGGTGTCCATACAGCAAAAACAAGCCAAAGAAAAGAGAGCCTGTTACACCA
GCTGCTGAGCCTGCAGCTAATGATCACCGATCTGCTTCCATTGCTTTACCACCACATCCA
TCGTCGCCTTCGCCTGCTAGTCGTTCTCGACATGGTCACAGTACACAGGGTGCATCCCCT
GTTCCTTCCCCTCCTGCTCTACCAGAGCCACCTTTGCCCACCGTTTCTTTTGCTCATCCA
CATCCTCCAAGTGAACATGGAACAGGGACAAGTCCTGCTCCAAGTGAAGAGGCAACACGA
GCGGGTCCTGCTGGGATGTCACAAGTGGCACCTGCACCTCATTCATCTTACGCCACCAGG
ATGCAGGGCAATGTTCCCTGCCGCTGGGTCGTTTTTGTCCTTGCGTTATGTACCCTAACA
AGCCTGCTACGATGA

Peptide Sequence

PEP ID

OQU88173
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:72536605:72541737:-1 gene:SORBI_3003G420300 transcript:OQU88173 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGKDAGEAQQPPDGAGGGAGGGAGGSRAGSARRFCCCGGGGGAAARVVRLQCVAALVLGV
AVLLSALFWLPPFAGRGGAKEGPDPGDEFGVASFRLHKTVPELSGNKSQLELDIYEEVGI
PNSTVVVNMLHPLDGSNWTNIIFNIVPFPENMTISSTWLSILRSKFMSLVVRQSTIHLTE
PLFGNSSSFEVIKFPGGITIIPPQTAFLLQKPHATFNFTLNYPIYKLQDRTNELKDQMKA
GLLLNPYENLYIKLTNSQGSTILPPTIVETSIVPKVGNNQPSVPRMKQLARTITNSSSSS
GNLGLNHTVFGRVKQISLSSYLRHSLHSGGGSDAPSPAPMHHHGHHGHHHHHHSHYDNRH
PAPAPAPVHFPVPQPRYSAPPPSGCPYSKNKPKKREPVTPAAEPAANDHRSASIALPPHP
SSPSPASRSRHGHSTQGASPVPSPPALPEPPLPTVSFAHPHPPSEHGTGTSPAPSEEATR
AGPAGMSQVAPAPHSSYATRMQGNVPCRWVVFVLALCTLTSLLR

Transcript Sequence

Transcript ID

OQU88173
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:72536605:72541737:-1 gene:SORBI_3003G420300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAAGTCTCCAACCGCCGCTGGTCTCTCTCCTCTCCTCTCCTCTCCTCTCCTCGAGACAA
CACAGCTACTAGAGGCTAGAGCTAGCTCTCGCTTCTCCTCCTCGGCTGGGCAGGCTGCAT
TCGCATTCCATTTCACCTCGCTGCGGTTTACCTCTCCCTTTCTCTCACCTTCCTCGCCCA
CCTCCGTCGCCTCCTCCTTAAGCAACGACGCGGCGAGCGACCCGCGACCCTAACCCTAGG
GAAGAGAGAGAGCCACCACCAGCAGCTGGGCCGACCGCACCCACCCACTCAGCGGCGGCA
ATGGCGGGGCGCCCCCTCACCCCTCGCTCGTCGGCGGCGGCCGGCCGGTATGCGTGAGAT
CGCGGCGCCGGATGGGGAAGGACGCCGGCGAGGCGCAGCAGCCGCCGGACGGGGCGGGCG
GCGGCGCAGGCGGAGGCGCAGGAGGAAGCAGGGCCGGTAGCGCCCGCCGCTTCTGCTGCT
GCGGAGGCGGAGGAGGAGCGGCGGCGAGGGTGGTTCGGCTGCAATGCGTGGCGGCGCTCG
TGCTCGGGGTGGCCGTGCTGCTGTCGGCGCTCTTCTGGCTCCCGCCCTTCGCGGGGCGGG
GCGGCGCCAAGGAGGGCCCGGATCCGGGCGACGAGTTCGGAGTGGCAAGCTTTAGGCTAC
ACAAGACAGTTCCTGAGCTGAGTGGAAATAAATCCCAGCTTGAACTGGATATATATGAGG
AAGTTGGCATTCCTAATTCCACGGTGGTTGTGAATATGCTACATCCATTAGATGGATCAA
ACTGGACAAACATCATCTTCAACATTGTTCCTTTCCCAGAGAACATGACTATATCATCAA
CATGGTTGAGCATTCTTAGATCAAAGTTCATGTCCTTGGTTGTACGGCAGTCAACAATCC
ACTTGACTGAACCTCTATTTGGGAATTCATCATCCTTTGAAGTAATTAAATTTCCAGGAG
GAATAACAATCATCCCTCCACAAACTGCTTTTCTTCTTCAGAAGCCCCATGCTACCTTTA
ATTTTACTCTGAACTATCCGATCTACAAATTACAAGACAGAACCAACGAGTTAAAGGATC
AAATGAAGGCAGGACTACTACTCAATCCATACGAGAATCTGTATATCAAATTGACAAATT
CACAAGGTTCAACGATTCTCCCTCCAACAATTGTTGAGACCTCCATTGTCCCCAAAGTTG
GAAATAACCAGCCATCTGTACCAAGGATGAAGCAGTTAGCACGAACAATTACCAATTCAT
CGTCATCCTCGGGAAACTTGGGTCTGAATCATACAGTATTTGGCAGGGTAAAGCAGATTA
GCCTTTCATCCTATCTCAGGCATTCCTTACATAGTGGAGGTGGTTCTGATGCACCAAGTC
CTGCACCCATGCATCATCATGGTCATCACGGCCATCATCACCATCACCACAGTCATTACG
ACAACAGGCATCCAGCTCCTGCTCCTGCTCCAGTACATTTTCCTGTGCCGCAACCCAGAT
ATAGTGCTCCACCTCCATCTGGGTGTCCATACAGCAAAAACAAGCCAAAGAAAAGAGAGC
CTGTTACACCAGCTGCTGAGCCTGCAGCTAATGATCACCGATCTGCTTCCATTGCTTTAC
CACCACATCCATCGTCGCCTTCGCCTGCTAGTCGTTCTCGACATGGTCACAGTACACAGG
GTGCATCCCCTGTTCCTTCCCCTCCTGCTCTACCAGAGCCACCTTTGCCCACCGTTTCTT
TTGCTCATCCACATCCTCCAAGTGAACATGGAACAGGGACAAGTCCTGCTCCAAGTGAAG
AGGCAACACGAGCGGGTCCTGCTGGGATGTCACAAGTGGCACCTGCACCTCATTCATCTT
ACGCCACCAGGATGCAGGGCAATGTTCCCTGCCGCTGGGTCGTTTTTGTCCTTGCGTTAT
GTACCCTAACAAGCCTGCTACGATGAAGGAAGTAAGTGGCTGGCCAACTAGATGTATATC
AGCAACCGCGGTGGCCACTGTTGTATGTACCAAAAAGAGAAGAGGACCCATGGTGCTCCA
ACGGCGGCTTATCTGGTTCCGGCCCGGCCAGGTGATCATCAGCTCCCGGGGGCGGGTGGG
CAAAGGCACAAGGAAGCTGAGAGCTCACCGCTCTTGAGTCTTGCCCCTTCGGTGGGATGT
GTCATCCTCTCGTTGCTAGTAGTTATCAGTTGTCACTGCATGTAAATATGGAGGGATGGG
ATGGGTATAAAAGGCAAGGCGAACCGCAAGACGGGCGGCCGCGCGTGGTGGTCAAAGCCA
CAGGGGGTGGCAGGCCCTTGTGTAGCGCGCGCGCCTCTGGTCAGGTCTGCTGCCGTGTGT
GTAGTGTACTGCTGCTCCTGCTCCTCCGGCGGGCTCGTCAAAAGTGTAAAGACCTCCAGT
TTCGTGGAGGTTCGTTTCGCAGCCATCCACGCTCACTTCTGCTGTGCTATCCTATCAGTG
TTTCATGGTGCTCTGATCTTACCGTGCTTAATGCCATAGAATGAAATCGTCGAGCTCTGT
GATCGGTGGTCACGGTCACGGCTCCTTCCATTCCACGCATGCATGCGTGTAGTATGGAAG
CTGCTGCAGTAACACATTGGCCCTGTTTGGTACAGCTTATAAGCTGCTTATGGGCTATGG
CCAACAATTTTGTTTG