Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88142
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:71794614:71798162:-1 gene:SORBI_3003G410600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGCGCAAGTACAACAAGATGCTGCTGGACAAGGACAGCCGTTGCCTGCACCACATG
TTCGCCGCGGAGATCTTCATGCACCAGTTCCTGCTGTCGAGCGCGGTGCGGACGCTGGAC
CCCGAGGAGGCCGACTGGTTCTACACGCCCGTGTACACGACCTGCGACCTGACGCCGCAG
GGCTTCCCGCTGCCGTTCCGCGCGCCGCGGATCATGCGGAGCGCGATCCGGTACGTGGCG
ACGACGTGGCCGTTCTGGAACCGGACGGACGGCGCGGACCACTTCTTCCTCACCCCGCAC
GACTTCGGCGCGTGCTTCCACTACCAGGAGGAGCGCGCCATGGAGCGCGGCATCCTGCCG
CTGCTCCGTCGCGCCACGCTGGTGCAGACGTTCGGGCAGCGGAACCACGTGTGCCTCCAG
GACGGGTCCATCACGGTGCCACCCTACGCCGACCCGCACAAGATGCAGGCGCACCTCATC
AGCCCCGGCACGCCGCGCTCCATCTTCGTCTACTTCCGCGGCCTCTTCTACGACATGGGC
AACGACCCCGAAGGCGGGTACTACGCCAGGGGCGCGCGCGCGTCGGTGTGGGAGAACTTC
AAGGACAACCCGCTGTTCGACATCTCGACGGAGCACCCCTACACGTACTACGAGGACATG
CAGCGGGCCATCTTCTGCCTGTGCCCGCTGGGGTGGGCGCCGTGGAGCCCCAGGCTGGTG
GAGGCGGTGGTGTTCGGGTGCATCCCCGTCATCATCGCCGACGACATCGTGCTGCCGTTC
GCCGACGCCATCCCCTGGGAGGACATCAGCGTGTTCGTGGCGGAGCGGGACGTGCCGAGG
CTCGACTCCATCCTCACCTCCATCCCGCTCGCCGACATCCTGCGGAGGCAGCGCCTGCTG
GCCAGGGAATCCGTCAAGCAGGCGCTGCTGTTCCACCAGCCGGCAAGGACAGGGGACGCC
TTCCACCAGGTGCTCAATGGGCTGGCGCGCAAGCTGCCGCACGGCGACGGCGTGTTCCTG
CAGCCCGGGGAGAAGGTGCTCGACTGGGACGCCGGACTCGACAGCGACCTCAAGCCCTGG
TAG

Peptide Sequence

PEP ID

OQU88142
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:71794614:71798162:-1 gene:SORBI_3003G410600 transcript:OQU88142 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPRKYNKMLLDKDSRCLHHMFAAEIFMHQFLLSSAVRTLDPEEADWFYTPVYTTCDLTPQ
GFPLPFRAPRIMRSAIRYVATTWPFWNRTDGADHFFLTPHDFGACFHYQEERAMERGILP
LLRRATLVQTFGQRNHVCLQDGSITVPPYADPHKMQAHLISPGTPRSIFVYFRGLFYDMG
NDPEGGYYARGARASVWENFKDNPLFDISTEHPYTYYEDMQRAIFCLCPLGWAPWSPRLV
EAVVFGCIPVIIADDIVLPFADAIPWEDISVFVAERDVPRLDSILTSIPLADILRRQRLL
ARESVKQALLFHQPARTGDAFHQVLNGLARKLPHGDGVFLQPGEKVLDWDAGLDSDLKPW

Transcript Sequence

Transcript ID

OQU88142
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:71794614:71798162:-1 gene:SORBI_3003G410600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCTGCCTCCTCCTCCTCCTCTTCGACTCTGAGTTCGTTCGCCAAATGCCCAAATCTCAA
AGCTCGCCGCCGGAACTCATACCAGCTAAAGCCGCCATCCCCCTTCCGGCTCACGACGAG
ATTCAGATTTGGCCGCGCGAGCTCCTCCTCCCGACCGCAATGCCGGCGCGATCCGCGCCC
AAATTGATCGCGCTGCCTGCCTGTGCCTGTGCCTTTGCCTCGTGCCGCCGCCGCCCGACA
ACCCCCTGCCCCGCCCCGGGTCTCGTGCTCGCTGCCGCGCCGCGTTCCGTTCCGCCTGGT
TTGCACGCAGCTTGGGAATTCGGAATTGGCAGCCTCTCCTTCTGGGATCGAGCAGCCGCG
GTTGCTGTGGCTGTCTCTAACGGTACCTGTGTGTGTGCGGCTGCCGCCCTGTGACCCTCC
GTGTGGCCGCTGCCTGGCACCAGCTGTACAGTGTACACAGCTGTACGTACCTGCAATGGT
ATAGCTCCCGTAGGCCGTAGCCGCTACTCTGTACTCAGGAGGAGTAAATGCTTCCGTCTC
CGACTGCATCAAGCAATGCATGCTTGTTGCCTTGCGGAAGAGATCGGTTGGTAGGTGAAG
CGAAATTTGTACTGTAGCAAGAGGACTTCAGCTTTCCTCTCATCCTACATTGTGTTTGCG
TTGCGTCATGCTTGATCAGTTATTGCTTGTGGTAGGAGCCGTAACTAGTATCAGTGTTCA
TCACGGTTCAGAAGTTCACCCTAGCTCTGTTGTACCTTCTCCCCAGCCACGCATCCTCCA
TAGCCTTGCTTCAAGTTAGGATGAAGCAGCACCTTCCAGAATTGGTTTCTCGAACGAGTA
ACAGCATCCAGGATCGGCGGTTCCTGTGGGGACAACTGCTGTACTGTGGCGTGGCGCCTA
ACTTGTGATAAGACTATCTCTGACGATCGTCATCCAAAATACAAAATACAAGACCCATTT
GTTCTTTGGGTAGCGCTACAGGTAAAAGTTTCCATACCTATTTTTAGTCTTCTCCAACAA
CAAGACCTAAAAGACAACATTCTCTGCAAATGGGTCTCGAGAAGAGAGGATACCCAAATT
TGGATTATGCCTCTCCTGATACCCAAAATAGATCTTCTGTATGCATACTCTGTTGGAGGT
ATTGTGTTGGAGACCCATTTTAGGTTTGGGTTTCCAAATGCCTCTGCGGTTGGAGACAGC
CTAAGATTGGCGTTCCATTGCCTGCAACGCAAGAGTTTTTCTTCTTCTTCTTTTGTGATT
TGAGGGCATTGCAAATTTGCAATGCAAGAGCTCGAACTGGGTTTTTTTTTTCGAGAACAT
GCGCGGCATGTAGAGCTCGAACTGGTGTGATATATACAACCATAAACAAAGGATAAGTGG
CAGCTAGATTGAGCGGTGGCCATCCACTCGCTCAACTGAACTGACCACTAGCACTTTCAA
GTGGTTTTCAATTTTTTTTCCCTTGAAAACCGGACATGCTCACAACCAGATTTGTGTGTA
CCGATAAAGAAAGGAGGGGATGAGAATAGCGTATCATTAAAGTAGACACCACTTGAAAGG
GATCGGTATTTTATTGATTAAAGTTCAAAATTTTGTGGTTGGTGGACTGCCGAAAGCAAC
AACTCCACCAAGATTTGTTGTACTCAGCGGTACTCATGTCTTTTTATGCCCTAGTACTGG
AGTGGTTACTAGTATAATCATATTCCACCTTTTGTATATCCATTTTTAAACTGGTTCTGC
AGAGATCCCATCTCTCTACAGATTTCCGCACATTGCATCGATGGTAACAACTACTCCCTC
AAGTTCCAAATTATAAGTCGTTGCCTTTTCTAGATTTTTCTATGTACCTAGATATCCTAC
CTTTTATTTGTAACAATTACTCCCTCAGCACATTTCATTTTGAATCGTAACTCCAGTTTG
AAGCGGTACTGAAACTGGTTCTGCAGAGATCCCATCTTTCTGCACATTTCAGCACATTGC
ATCGTTAGGTCCATCATAAGATATATTTTCATAGTTATACCTCTTTTTTTCTATAGAATT
GATCAAACTTTAGAGAACTTTTGGCTAGGGATAAAGGTAGAATTGCGTTCTTTCCCCTTC
CGATGAAGAAAGAATTGGTTTCTCCTAATATGGACGAACGTTGGTTTGGCAGGGAACGCG
GTGGGCGTGCTGGACGACGACCCCGTGGGGAAGCTGAAGGTGTTCGTGTACGAGATGCCG
CGCAAGTACAACAAGATGCTGCTGGACAAGGACAGCCGTTGCCTGCACCACATGTTCGCC
GCGGAGATCTTCATGCACCAGTTCCTGCTGTCGAGCGCGGTGCGGACGCTGGACCCCGAG
GAGGCCGACTGGTTCTACACGCCCGTGTACACGACCTGCGACCTGACGCCGCAGGGCTTC
CCGCTGCCGTTCCGCGCGCCGCGGATCATGCGGAGCGCGATCCGGTACGTGGCGACGACG
TGGCCGTTCTGGAACCGGACGGACGGCGCGGACCACTTCTTCCTCACCCCGCACGACTTC
GGCGCGTGCTTCCACTACCAGGAGGAGCGCGCCATGGAGCGCGGCATCCTGCCGCTGCTC
CGTCGCGCCACGCTGGTGCAGACGTTCGGGCAGCGGAACCACGTGTGCCTCCAGGACGGG
TCCATCACGGTGCCACCCTACGCCGACCCGCACAAGATGCAGGCGCACCTCATCAGCCCC
GGCACGCCGCGCTCCATCTTCGTCTACTTCCGCGGCCTCTTCTACGACATGGGCAACGAC
CCCGAAGGCGGGTACTACGCCAGGGGCGCGCGCGCGTCGGTGTGGGAGAACTTCAAGGAC
AACCCGCTGTTCGACATCTCGACGGAGCACCCCTACACGTACTACGAGGACATGCAGCGG
GCCATCTTCTGCCTGTGCCCGCTGGGGTGGGCGCCGTGGAGCCCCAGGCTGGTGGAGGCG
GTGGTGTTCGGGTGCATCCCCGTCATCATCGCCGACGACATCGTGCTGCCGTTCGCCGAC
GCCATCCCCTGGGAGGACATCAGCGTGTTCGTGGCGGAGCGGGACGTGCCGAGGCTCGAC
TCCATCCTCACCTCCATCCCGCTCGCCGACATCCTGCGGAGGCAGCGCCTGCTGGCCAGG
GAATCCGTCAAGCAGGCGCTGCTGTTCCACCAGCCGGCAAGGACAGGGGACGCCTTCCAC
CAGGTGCTCAATGGGCTGGCGCGCAAGCTGCCGCACGGCGACGGCGTGTTCCTGCAGCCC
GGGGAGAAGGTGCTCGACTGGGACGCCGGACTCGACAGCGACCTCAAGCCCTGGTAGTAC
TAGTACTAGTGTACCACTTGTTGTGCAATCTGTTCATGTTCGTTTCTTCTCTTTGATTTG
ACATCGGTGGATGGATGGGTGTATCACGCATTAGTTTTTGTACCACGGCCCGTTTACATG
CATAACAGCAGCAGTATAATATAGAGGGTATATTCGTCGGGAGATGTCAAGTTCAGATTA
ACGTATAGTGATCGCTACTATGCAAGTACATCAATGATTCAAATGTGACGTGATTTCGCA
TTTGTAATA