Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88121
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:71275763:71281032:1 gene:SORBI_3003G405600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGGCGCCGAGCAGCCGCGCGCTGGCGCTGGGCGCGGCCTTCCTGCTGCTCCTCGTC
GCGCTGCCCTCGGCCTTTCTCTACCTCACCACCTCCGCGGCGCCCGCGGCGGCCACCCGC
GCCACGCTCCTCAACCTCAAGCCCTTCTCCGCCAGGTGCGCGCCCGCCGCCGCGGCGCCG
CTCCGCGTCTTCATGTACGACCTGCCCGCGCGCTTCCACGTCGCCATGATGGGGGCCGAC
GACGGCGCGGGGTTCCCCGCGTGGCCGCCGTCCGCGGGCGGGATCAGGCGCCAGCACAGC
GTGGAGTACTGGATGATGGCGTCGCTCCAGGACGGGGCCGCGGGACCGGATGGGGGAAGG
GAGGCCGTCAGGGTGCGGGATCCTGACGCCGCCGACGCCTTCTTCGTGCCCTTCTTCTCC
TCGCTCAGCTTCAACGTGCACGGCCGTAACATGACCGACCCCGACACCGAGGCCGACCGT
CTCCTGCAGGTTGAAATTGTGGACATTCTATGGAAGTCTAAATATTGGCAACGGTCTGCA
GGCCGTGACCATGTTATTCCTATGCATCACCCTAATGCTTTCAGATTCCTGCGAGCAATG
GTGAATGCATCTATTCTAATAGTTTCAGACTTTGGGAGATACACAAAGGAGCTGGCTTCC
CTGAGGAAAGATGTTGTGGCACCATATGTGCATGTTGTGGATTCTTTCCTTGATGACGAT
CCACCTGATCCATTTGAGGCTCGTCATACACTGCTTTTCTTTCGAGGCCGTACTGTCAGG
AAAGATGAAGGGAAGATCCGGGCAAAACTTGGGAAGGTATTAAAAGGTAAGGAAGGGGTG
CGCTTTGAGGATAGCATTGCTACAGGCGACGGCATTAAAATATCTACAGAAGGTATGCGG
TCGTCAAAGTTTTGTCTCCACCCTGCTGGGGACACTCCTTCCTCATGCCGCCTGTTTGAT
GCTATAGTCAGTCATTGTGTTCCTGTGATAGTCAGCAGTCGCATTGAGCTCCCTTTTGAA
GATGAGATTGATTACAGTGAGTTCTCCCTTTTCTTCTCGGTTGAAGAAGCTCTAAGACCT
GATTACTTACTGAACCAGCTCAGACAGATCCCCAAAAAGAAGTGGGTTGATATGTGGTCG
AAGCTTAAAAATGTCTCTCATCATTATGAATTCCAGTATCCCCCCAGGAAGGGTGATGCG
GTGAACATGATATGGAGGCAGGATCTGGAGTAG

Peptide Sequence

PEP ID

OQU88121
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:71275763:71281032:1 gene:SORBI_3003G405600 transcript:OQU88121 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGAPSSRALALGAAFLLLLVALPSAFLYLTTSAAPAAATRATLLNLKPFSARCAPAAAAP
LRVFMYDLPARFHVAMMGADDGAGFPAWPPSAGGIRRQHSVEYWMMASLQDGAAGPDGGR
EAVRVRDPDAADAFFVPFFSSLSFNVHGRNMTDPDTEADRLLQVEIVDILWKSKYWQRSA
GRDHVIPMHHPNAFRFLRAMVNASILIVSDFGRYTKELASLRKDVVAPYVHVVDSFLDDD
PPDPFEARHTLLFFRGRTVRKDEGKIRAKLGKVLKGKEGVRFEDSIATGDGIKISTEGMR
SSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSSRIELPFEDEIDYSEFSLFFSVEEALRP
DYLLNQLRQIPKKKWVDMWSKLKNVSHHYEFQYPPRKGDAVNMIWRQDLE

Transcript Sequence

Transcript ID

OQU88121
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:71275763:71281032:1 gene:SORBI_3003G405600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAAGAATCAAACTGTTTTCTATTGAATTTCTCGCGTGGCGGTTAACAGTCAGTCACCGTG
GCCACGGTCACGATCCAAAGCAGAATTGGAGCACTGAGCACACGAGCGCAGACAGCCGTC
GCCATCGTCCCTCGCAAATTCGGTAGCGGACACAGTTTGCTTTGCTCCACCCAAACTCCC
CCAACAGCCCCAGCCAATCACCACATTCCAATAGGCAATAGCTCACCAGAGCAACGACGG
GAGATCGACACGAGAGTTCATCCCGTTGTAGATTGCGCATTGATTGTCCGTCTGGAAGTC
CACGCCTTGGCCAGATCGAGATCAAGCTAGAAGAGATCGAGATCAAGCTAGACGACGTGT
TTTTTCAATCGGATCAATCACAAGACGTGCATGCATTCCAGTTTCAGTGTTCCATCTGGT
CCACCCACCCAGCCGTTCATCGAGGGACAAGTTCCCATCCCCGACTACTTTACCACCACC
ACCACCACCGGAATTCGGAAGGTACAGCCCAGCCAACCAACGGGCGTGCTCACTGCGCGG
CGCCGTTGGGGTCGGCGAGCGCCATGGGGGCGCCGAGCAGCCGCGCGCTGGCGCTGGGCG
CGGCCTTCCTGCTGCTCCTCGTCGCGCTGCCCTCGGCCTTTCTCTACCTCACCACCTCCG
CGGCGCCCGCGGCGGCCACCCGCGCCACGCTCCTCAACCTCAAGCCCTTCTCCGCCAGGT
GCGCGCCCGCCGCCGCGGCGCCGCTCCGCGTCTTCATGTACGACCTGCCCGCGCGCTTCC
ACGTCGCCATGATGGGGGCCGACGACGGCGCGGGGTTCCCCGCGTGGCCGCCGTCCGCGG
GCGGGATCAGGCGCCAGCACAGCGTGGAGTACTGGATGATGGCGTCGCTCCAGGACGGGG
CCGCGGGACCGGATGGGGGAAGGGAGGCCGTCAGGGTGCGGGATCCTGACGCCGCCGACG
CCTTCTTCGTGCCCTTCTTCTCCTCGCTCAGCTTCAACGTGCACGGCCGTAACATGACCG
ACCCCGACACCGAGGCCGACCGTCTCCTGCAGGTTGAAATTGTGGACATTCTATGGAAGT
CTAAATATTGGCAACGGTCTGCAGGCCGTGACCATGTTATTCCTATGCATCACCCTAATG
CTTTCAGATTCCTGCGAGCAATGGTGAATGCATCTATTCTAATAGTTTCAGACTTTGGGA
GATACACAAAGGAGCTGGCTTCCCTGAGGAAAGATGTTGTGGCACCATATGTGCATGTTG
TGGATTCTTTCCTTGATGACGATCCACCTGATCCATTTGAGGCTCGTCATACACTGCTTT
TCTTTCGAGGCCGTACTGTCAGGAAAGATGAAGGGAAGATCCGGGCAAAACTTGGGAAGG
TATTAAAAGGTAAGGAAGGGGTGCGCTTTGAGGATAGCATTGCTACAGGCGACGGCATTA
AAATATCTACAGAAGGTATGCGGTCGTCAAAGTTTTGTCTCCACCCTGCTGGGGACACTC
CTTCCTCATGCCGCCTGTTTGATGCTATAGTCAGTCATTGTGTTCCTGTGATAGTCAGCA
GTCGCATTGAGCTCCCTTTTGAAGATGAGATTGATTACAGTGAGTTCTCCCTTTTCTTCT
CGGTTGAAGAAGCTCTAAGACCTGATTACTTACTGAACCAGCTCAGACAGATCCCCAAAA
AGAAGTGGGTTGATATGTGGTCGAAGCTTAAAAATGTCTCTCATCATTATGAATTCCAGT
ATCCCCCCAGGAAGGGTGATGCGGTGAACATGATATGGAGGCAGGATCTGGAGTAGTAGG
AAAAGGTGAACAGAAAATACAGAGCGCTGCTGCTGATGTGAACTAGAGGGGGTGCACATG
AAGATGCAGTGATGCACGCGGCACACATGACAGTAAGCATGACACTCCCCTGGATTAGTA
AATGATGATGATGCAATCACAGGAGAGCCAAGCAGAGCAGGACAGCAGAGCAACAATTCT
TTTTGTCGATGCTTGGTTGCAAAGCTAGCGGTGGTTGGTTGGAGCTTGATATGGAACTAT
GGGAGGATTATATATAATATAATGGGTTAAGCCATGCCACGGTGTGTCGGAAGGACAAGC
GAACAGCACGAGCACGAGGCCATGTGCCTGCAGCCTGCAGGCTGAAAAACTTTTGGATTA
GTGCAACAAAACAGCTAGACAAAGATAATAACATTACTGATTGGCCATTAAGAGTGAGGG
GACTAGGATATCCTCCTGCATCCTCTAGCCGTCCTTAGCAAGTTTGCTTCATGTACCGGA
TGAGCATGTTCCATTTACGCCTTGTTTAGTTCCAAAATATTTTGCAAAATCGACACTGTA
GCTTTTTCGTTTGTATTTGACAAATATTATCCAATCATAGA