Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88085
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:70678284:70683878:1 gene:SORBI_3003G396800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGGCGGCTGCTCGCCCACCTACACCCCCATGCCCAGAGCCTCCTCGCTCCGCTGCCT
AGCAAACCCTCCATCGCCACCAAGCTCCCCTTCCTCCTTCCCCGCCGCCTCCTTTCCGAT
GCCGGCTCGCCTCCTGCCCCCTCGCTTCCGTCTCCTTCCCCGCCCGCTACCGACGTCACG
AACACAGAGCTGAAGAAGAGGTTGGAGACTTACTATGGGGTGGATGAAGAGGCAGAGTTA
CCATCTGTCGCTGAGGCTGTCCTTGAGCGGAATCTCACGGGTGCCCATAGTGAGACTGAT
GATGACCTTATTGAGGAGCTGCGTAGAAAGCCACTTCCTGAAGTCGGTGACCAAGACTTT
GAGTCTGATTTTGAGGAGATGCACGATACCGACGAGGAGCTGAGTGACCTCTACAATGCG
AGGGAGCATGTTGAGAAGAAGATCAAGAACAATGAGTTGTTTAACATGGATGATACCAAG
TGGGATGCCTGGATGAAGGAGGCCACAGACAAGGGCTGCTTCCCTAACATGAAGGTGTGC
GAGGGAATCCTCGAGGACATGCTCTACTGGGACAAGTTACTACCTGATGAGATCAAACAA
AAGGTGGAGGCCAAATTTAATGAGTTGGGAGACATGTGTGAGAGGGGAGAGATGGAACCT
GAGAAGGCGTATGAGTTGTTCAAAGAATTTGAGGACAAGATGGTTGCCGAGTGCACTGAA
CTAATCGAAGCAGAGACGCCAACTGATGCTGATGAACTGACTGAATCAGGAAGTAAGAAA
GTTGAGTTAGATGATCTACCTGGCGAGGGACCTGTTCTAAGGTGGGAATCACGGATTGTG
TTTGCTCCTAGTGGCGATGCATATCATCCCAAAAACAGAAAAGTCAAACTCAGTGTAACT
GTGAAGGAACTGGGACTTTCACGACATGCTTTCCGTCGGTTGCGTGATGTTGTTGGAAAG
AGGTATAATTCTGGGAAAGATGAGCTCACAATAATCAGTGAAAGGTTTGAACATCGGGAA
GAGAACAGAAAAGACTGCTTGAGGACACTGTATACTCTAATAATAGATGCAATAAAAGCT
GACAAACTTGTTGAGGATGCCAGGAATGCTTATGTTAAAGGAAGACTTAAGGCTAATCCT
CAATTTATGGAACGATTGAAGAGGAAGACAGAGAAATTGATGGCAGCTGCATAA

Peptide Sequence

PEP ID

OQU88085
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:70678284:70683878:1 gene:SORBI_3003G396800 transcript:OQU88085 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRRLLAHLHPHAQSLLAPLPSKPSIATKLPFLLPRRLLSDAGSPPAPSLPSPSPPATDVT
NTELKKRLETYYGVDEEAELPSVAEAVLERNLTGAHSETDDDLIEELRRKPLPEVGDQDF
ESDFEEMHDTDEELSDLYNAREHVEKKIKNNELFNMDDTKWDAWMKEATDKGCFPNMKVC
EGILEDMLYWDKLLPDEIKQKVEAKFNELGDMCERGEMEPEKAYELFKEFEDKMVAECTE
LIEAETPTDADELTESGSKKVELDDLPGEGPVLRWESRIVFAPSGDAYHPKNRKVKLSVT
VKELGLSRHAFRRLRDVVGKRYNSGKDELTIISERFEHREENRKDCLRTLYTLIIDAIKA
DKLVEDARNAYVKGRLKANPQFMERLKRKTEKLMAAA

Transcript Sequence

Transcript ID

OQU88085
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:70678284:70683878:1 gene:SORBI_3003G396800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCTTTAGGCCCAAATCAAACGCGCCCTCTCCCCGGGCTCGCACCCGCCGCCGCCATTCAC
GCTCGCAGGAGCCGCCGCCGCCGCTCACGCTCCAGGCTGCGAGCCCACTGCCGCTCGCGA
GCTCCTCGTCCCAGGTCCCATCTGCCATCTGCCGTCCCGATCGAGCGACAGCGAGGCTTC
GGTGGCCGGCGGCCGGCGCGCAATCTGCGGGTCTTCGTCGACCGTCGTCGTCTCCCTCCT
CTCGGCCGCCGGTGCGATGAGGCGGCTGCTCGCCCACCTACACCCCCATGCCCAGAGCCT
CCTCGCTCCGCTGCCTAGCAAACCCTCCATCGCCACCAAGCTCCCCTTCCTCCTTCCCCG
CCGCCTCCTTTCCGATGCCGGCTCGCCTCCTGCCCCCTCGCTTCCGTCTCCTTCCCCGCC
CGCTACCGACGTCACGAACACAGAGCTGAAGAAGAGGTTGGAGACTTACTATGGGGTGGA
TGAAGAGGCAGAGTTACCATCTGTCGCTGAGGCTGTCCTTGAGCGGAATCTCACGGGTGC
CCATAGTGAGACTGATGATGACCTTATTGAGGAGCTGCGTAGAAAGCCACTTCCTGAAGT
CGGTGACCAAGACTTTGAGTCTGATTTTGAGGAGATGCACGATACCGACGAGGAGCTGAG
TGACCTCTACAATGCGAGGGAGCATGTTGAGAAGAAGATCAAGAACAATGAGTTGTTTAA
CATGGATGATACCAAGTGGGATGCCTGGATGAAGGAGGCCACAGACAAGGGCTGCTTCCC
TAACATGAAGGTGTGCGAGGGAATCCTCGAGGACATGCTCTACTGGGACAAGTTACTACC
TGATGAGATCAAACAAAAGGTGGAGGCCAAATTTAATGAGTTGGGAGACATGTGTGAGAG
GGGAGAGATGGAACCTGAGAAGGCGTATGAGTTGTTCAAAGAATTTGAGGACAAGATGGT
TGCCGAGTGCACTGAACTAATCGAAGCAGAGACGCCAACTGATGCTGATGAACTGACTGA
ATCAGGAAGTAAGAAAGTTGAGTTAGATGATCTACCTGGCGAGGGACCTGTTCTAAGGTG
GGAATCACGGATTGTGTTTGCTCCTAGTGGCGATGCATATCATCCCAAAAACAGAAAAGT
CAAACTCAGTGTAACTGTGAAGGAACTGGGACTTTCACGACATGCTTTCCGTCGGTTGCG
TGATGTTGTTGGAAAGAGGTATAATTCTGGGAAAGATGAGCTCACAATAATCAGTGAAAG
GTTTGAACATCGGGAAGAGAACAGAAAAGACTGCTTGAGGACACTGTATACTCTAATAAT
AGATGCAATAAAAGCTGACAAACTTGTTGAGGATGCCAGGAATGCTTATGTTAAAGGAAG
ACTTAAGGCTAATCCTCAATTTATGGAACGATTGAAGAGGAAGACAGAGAAATTGATGGC
AGCTGCATAAGGTGTGTTACGGAGCTCCTTGTTGTAATAGTTCCTCCCTTTCCTTCATCA
ACATGGTGACTATTCTGTATTCTCATTTTTATTGTTGGTTATAACACAGGGAGAATAATA
TGTTGTATGCACTTAGCTTCGCTTTCTTTAATTGCTTGGACTCTTTTGTAGGGGTATTCT
TAGTCATACTATATGTTGATCATCTAGAATAACAATGTCAACATACATCTGCACTCTATG
CCTTTTTGGAGACCTTTTGCTGTTTCCTAAATTGAAGATCGAAGATGCTTACTTTCCTCA
GTTTGCTCAGAGTAGCAACTACTACTCACATGGTATTTTGGTATTAATAAGCCGCTGTTC
ATCGCATGGTACCTTTTGTGTACGTCGAATTCTCATGAAGTCACGGATTCATGTAGGCAG
GACTGGTATCAAATCTTAACCTTCTGGTCTGTACAATCGATTCATTTAAAGGGTAATTTC
TACCTTGTTTAGGCAACCTCAGTTTCTACATTCTGTGTGCTAATTGTCAGTTTCTACATT
CTACTATGTGCTAATTGTCATGTCAAGTTAGCTACTTACGATATGTGCCCTGTAGTGTTA
GCTGTAGTGTTAGCACGGGTACGGAAATTCAGTTCCTACATTCTATGTGCTAATTGTCAT
GTCAAGTTAGCTACTTACGATATGTGCCCTGTAGTGTTAGCACGGGTACGGAAATTCAGT
TCCTACATTCTATGTGCTAATTGTCATGTCAAGTTAGCTACTTACGATATGTGCCCTGTA
GTGTTAGCACGGGTACGGAAATTCAGTTCCTACATTCTATGTGCTAATTGTTATATTGAA
TCCGGGTCATATGCTGGGTCATGAATCCGGGTCATATACTGGGTCATGAATCCGGGTCGT
ACGGAATACGGAGGGTAGAAAGTGCTTTACACATTTGTACGTACATGCATGATGCATCAT
TAGCTCTGCCATTGATTATGTGCTACAACATCATGGTCACAGGTGCAACGCGTTTGGAAT
AAAACTTAACTGAGATTGGTTGGTCCGGTTCACTTAAACACATTTTGGGCAGAACTTGGA
AATATTCATATTTTTCTTCTAACTCCAAGAGTTTGTAAAATTCACTCTCTAAATCGTTAT
TTAAAAAGTCATTTAAATAAAAACTGTTTTTTATATCTTTTCACTCTATATAACGGCTCT
TTTACATCTTGTGTACTCTGGAGAGTTAGTCTTGCTCCATCTTTAGTTAGCGAGAAATCT
AGAAAATGACTATTTGATACCCAATTTAAAAAGTTGTTGAAACTATTTTCTAACTAAAAT
CTCTATTCCTAACAATTAGAAAATAGACAGTTTTTGGAGTTGCTCAATTACTCTAAAGTA
TATCTATTCGATCAATCAAATGAACCTGTTTCTGTTTGTGTTTTGTATGGAATCTATACA
CGATTGACGATTATTGCCATTATTTGTGCAGATGCAGGGCGCGTATGCGAGACTACAGCG
TGCATGGACCCAATGTTGAGTCGGTGGCATCGTGCAGAGGGCACGTGGCGGCGGAGTGTT
GATAGTGGTCAGTACAATCGCGATTCAGAGCTCAGCTTTTGACAAATGAAGAACGTCCTG
TACCCGGTTTAGTAGTTAAGGTCCCATTCCTTGGAGCTTATTTATCGAATCTATCTATTA
TTTAACATGTTTTTCTCTCATAATAAATTAATAAATAGTACTTTCAGC