Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88070
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:70511397:70516563:-1 gene:SORBI_3003G394300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAAACTGGTGGATGGTTTGACAAAAAAAAAAGTACTTGCAGGAGTGGCAATGAGGAG
GGTGGTTTGATGAAAAATGTGATTGCTACAAAGGACACCGATACTGTTGAATGTGAAGAT
GCTGATCAACATTGTCAAGGTGCTTCTGCTCCACGTGAGGAAAAAGTTAGCAACCTGAAA
GCTGCTTTGGTTCATGTGGCCCGAAAAATGCCTAAGAATGCTCATGCACATTTTATGTTG
GGTTTAATGTATCAAAGGCTTGGTCAGGCACAGAAGGCAATAGCATCATATGAGAAGTCA
ACTGAAATACTGCTACAAGATGAAGAAGAAGTGCGGAGGCCTGATTTACTCTCATCAGTG
AGGATACACCACGCACAGTGCATTTTGCAAGCAAGCATGGGGGATAGTTTTGACGAAGAG
CTTGAAACTGGTGAGGTAGATGACATTCTTGCCAAGTTGAAGAGTTCAGTTGAGTCAGAT
CACAGGCAAGCAGCTGTTTGGAATATCCTAGGTTTAGTTCTTCTTCGGGGTGGTCAAATA
CAGAGTGCTATCTCAGTTCTATCTTCTCTCACGGCTGTTGCTCCAGACTACTTGGACTCC
CTTGCGAATCTTGGTGTCGCATACATTCAAAGTGGGGATCTAGAGATGTCTGCAAAGTGC
TTCCAAGAACTTCTTCTAAAAGATCAAAACCACCCAGCTGCTCTGGTGAACTATGCAGTT
CTTCTTCTCTGTAGATATGGGTCTTTGTCTGCAGGGGCAGGGGGCAATGTCAGCACAGGT
CCTTACCTGCATCAGAAAGAAGCCTTAGTTGTTGCAAAAGAGTGCTTACTTGCAGCAGTG
AAGGCTGATCCTAGAGCCGCATCAGTTTGGGTTAATCTTGCAAATGCATATTATATGGAT
GGTGAGCATAGGAACTCAAAGAGGTGCTTGGAGCAGGCAGCAAAATTGGAACCCAATCAT
ATGCCTGCTCGGTATGCTATTGCAGTTCACCGTATCAGAGATGCTGTAAGGTCACAATGT
TCTGATGATCAACTTCTTTGGGCTGCAAATGAGATGGCAACAGTTCTAAAAGAAGGAGAC
CCTTCTGCAGTTGATGCCCCAATTGCATGGGCTGGGTTGGCAATGGCTCACAGGGCACAA
CATGAAATTGCAGCAGCCTACGATAACGAAAACATCAATCTTAATGATGCAGAAGAGCGA
GCTCAATATACACTAAAACAGGCAATCCAAGAGGACCCAGATGATGCCGTTCAGTGGCAT
CAACTTGGCCTGTACAATATTTGCATGACCAGGTTCAGCAGGTCTGTAAATTTTCTTAAA
GCAGCTTTAGCCCGTTCCCCAGATTGCAGTTATGCTTGGTCGAATCTTGGTATCGCATTG
CAACTATCAGATGATCCATCCTCTGAAACTGTATATAAGCGGGCACTGCTAAAATCATCA
ACTCAGCAGCTGCACGCAATCTTCTCGAATCTTGGAATTCTTTATCGGCAGCATAGGAAC
TATGAATTTGCAAGGAAGATGTTATTAAGGTCGTTGGAATTGTGTCCTGGATATGCACCA
GCCAGCAATAACCTGGGCCTTGTATTTGTCGCTGAGGGCCGTTGGGAGGATGCTAGAAGC
TGTTTTGAGAAAGCTCTGCAATCTGATCCCCTACTTGATGCGGCCAAATCGAACTTGTCA
AAAGTCCTTGCATTGTCTAAGAAACAGTAG

Peptide Sequence

PEP ID

OQU88070
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:70511397:70516563:-1 gene:SORBI_3003G394300 transcript:OQU88070 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKTGGWFDKKKSTCRSGNEEGGLMKNVIATKDTDTVECEDADQHCQGASAPREEKVSNLK
AALVHVARKMPKNAHAHFMLGLMYQRLGQAQKAIASYEKSTEILLQDEEEVRRPDLLSSV
RIHHAQCILQASMGDSFDEELETGEVDDILAKLKSSVESDHRQAAVWNILGLVLLRGGQI
QSAISVLSSLTAVAPDYLDSLANLGVAYIQSGDLEMSAKCFQELLLKDQNHPAALVNYAV
LLLCRYGSLSAGAGGNVSTGPYLHQKEALVVAKECLLAAVKADPRAASVWVNLANAYYMD
GEHRNSKRCLEQAAKLEPNHMPARYAIAVHRIRDAVRSQCSDDQLLWAANEMATVLKEGD
PSAVDAPIAWAGLAMAHRAQHEIAAAYDNENINLNDAEERAQYTLKQAIQEDPDDAVQWH
QLGLYNICMTRFSRSVNFLKAALARSPDCSYAWSNLGIALQLSDDPSSETVYKRALLKSS
TQQLHAIFSNLGILYRQHRNYEFARKMLLRSLELCPGYAPASNNLGLVFVAEGRWEDARS
CFEKALQSDPLLDAAKSNLSKVLALSKKQ

Transcript Sequence

Transcript ID

OQU88070
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:70511397:70516563:-1 gene:SORBI_3003G394300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTCATGTAGCAACTCAAATTTTGTGAGAATTGTTACGAATTCAACAAATATGCTATCCGC
ATGGTTCTGAAAATTCCATGCATATATTCCATATAGTAATTTCGGTTCCTTGATTATAGT
TGTCTTATAAATTGTAATCATCATTTACTTGAACAGGAGGTAACATATAGTGCTCTATTT
TGGTAAAAAAGGGGCTACCAGAATAGTATCCAAATCCTTACAAATTAGAAAATAATTGTT
GAGTCATAGCCGGAGATGCATCTAGACCACAAGTTTTCTGTTGAGTCCTTGGACAATGAA
AACTGGTGGATGGTTTGACAAAAAAAAAAGTACTTGCAGGAGTGGCAATGAGGAGGGTGG
TTTGATGAAAAATGTGATTGCTACAAAGGACACCGATACTGTTGAATGTGAAGATGCTGA
TCAACATTGTCAAGGTGCTTCTGCTCCACGTGAGGAAAAAGTTAGCAACCTGAAAGCTGC
TTTGGTTCATGTGGCCCGAAAAATGCCTAAGAATGCTCATGCACATTTTATGTTGGGTTT
AATGTATCAAAGGCTTGGTCAGGCACAGAAGGCAATAGCATCATATGAGAAGTCAACTGA
AATACTGCTACAAGATGAAGAAGAAGTGCGGAGGCCTGATTTACTCTCATCAGTGAGGAT
ACACCACGCACAGTGCATTTTGCAAGCAAGCATGGGGGATAGTTTTGACGAAGAGCTTGA
AACTGGTGAGGTAGATGACATTCTTGCCAAGTTGAAGAGTTCAGTTGAGTCAGATCACAG
GCAAGCAGCTGTTTGGAATATCCTAGGTTTAGTTCTTCTTCGGGGTGGTCAAATACAGAG
TGCTATCTCAGTTCTATCTTCTCTCACGGCTGTTGCTCCAGACTACTTGGACTCCCTTGC
GAATCTTGGTGTCGCATACATTCAAAGTGGGGATCTAGAGATGTCTGCAAAGTGCTTCCA
AGAACTTCTTCTAAAAGATCAAAACCACCCAGCTGCTCTGGTGAACTATGCAGTTCTTCT
TCTCTGTAGATATGGGTCTTTGTCTGCAGGGGCAGGGGGCAATGTCAGCACAGGTCCTTA
CCTGCATCAGAAAGAAGCCTTAGTTGTTGCAAAAGAGTGCTTACTTGCAGCAGTGAAGGC
TGATCCTAGAGCCGCATCAGTTTGGGTTAATCTTGCAAATGCATATTATATGGATGGTGA
GCATAGGAACTCAAAGAGGTGCTTGGAGCAGGCAGCAAAATTGGAACCCAATCATATGCC
TGCTCGGTATGCTATTGCAGTTCACCGTATCAGAGATGCTGTAAGGTCACAATGTTCTGA
TGATCAACTTCTTTGGGCTGCAAATGAGATGGCAACAGTTCTAAAAGAAGGAGACCCTTC
TGCAGTTGATGCCCCAATTGCATGGGCTGGGTTGGCAATGGCTCACAGGGCACAACATGA
AATTGCAGCAGCCTACGATAACGAAAACATCAATCTTAATGATGCAGAAGAGCGAGCTCA
ATATACACTAAAACAGGCAATCCAAGAGGACCCAGATGATGCCGTTCAGTGGCATCAACT
TGGCCTGTACAATATTTGCATGACCAGGTTCAGCAGGTCTGTAAATTTTCTTAAAGCAGC
TTTAGCCCGTTCCCCAGATTGCAGTTATGCTTGGTCGAATCTTGGTATCGCATTGCAACT
ATCAGATGATCCATCCTCTGAAACTGTATATAAGCGGGCACTGCTAAAATCATCAACTCA
GCAGCTGCACGCAATCTTCTCGAATCTTGGAATTCTTTATCGGCAGCATAGGAACTATGA
ATTTGCAAGGAAGATGTTATTAAGGTCGTTGGAATTGTGTCCTGGATATGCACCAGCCAG
CAATAACCTGGGCCTTGTATTTGTCGCTGAGGGCCGTTGGGAGGATGCTAGAAGCTGTTT
TGAGAAAGCTCTGCAATCTGATCCCCTACTTGATGCGGCCAAATCGAACTTGTCAAAAGT
CCTTGCATTGTCTAAGAAACAGTAGAACAAGACTACAAAGAAGACCTAACTCCTAAGGAA
ATTTCCACTGGAGCCTCGGAGTTCAAACACGGAAGCGTGGTCACCAAATCTCTGTTCTGA
AGTGTCTCAAGGGGCAATTCAAATTTGATGCTTGGTGCTTCTGTACTGCACTACTGCTCA
CAGGTGTAGGAAGTTTCAGAAGTGCAGATTCTAAGACGGCAGTTGGTTTTGACCGAGGGG
CTGCCCTTGATTTTTAGAAGCTACACAGGCTCCGAAGTAGCTGTGATGTGTTCTTAAAGA
GTCGCATCGGCGCAGGAAGGGCCCTGATTTTGAAGTTCTTGTGTAGTTAAATTTCGATGT
AAGCCTGTAACAAGCCTGTATGTGAACGGCTTCCGTTAGCTGATGTATATAAATAAATAA
TATACTCCATAAAAAATCAGTGTTTAGATAGCAACTTCTGGTTCTGTGCATGAAACTAAC
TCCATGTAAACGTCAAATTTGACAGCAATTCCACTTTGGAATTAAAAGGGCGTCCTAAGT
GTATAAGAATGG