Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88056
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:70315424:70318504:-1 gene:SORBI_3003G392200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGAGCGTCGGCGTGAAGATCTACAGCGTCTTCTTCAAGCTCTTCCTCCGCCACCGC
CTCCAGTCGCTGGCCGCCGCCGCCGCCGCCGCGGGGGACAACCTCGACAGCGCGGCCTTC
GGGGTCTCCTGCCGCCCCGACGAGGCCACCGCGCCGCCCAACCCGGCCTTCTCCGCCTCC
GCCGACGGCGTCGCCTCCAAGGACCTCCACATCGACCCCAACTCCTCGCTCTCCGTCCGC
ATCTTCCTACCCACGCCCCCGCCGCCGACCCCGCACGCGCACCTCCTCGCGCACGCGCCC
TCGCGCCGCGCCAGCGACCCCACACCGACTCCCCCCGCGCCCGCAGCCGGCGCGCCGTAC
CGCGGGTACCTCCCGCACGCCGTCGCCTCGCCGCGCGCCGCCGTGTCGGCGCGCCGGAGG
CTGCCCATCGTCGTGCAGTTCCACGGCGGCGGCTTCGTCACCGGGAGCAACACTGCCGCG
GCCAACGACGCCTTCTGCAGGAGGGTCGCCAAGCTCTGCGATGCCATTGTCGTCGCAGTG
GGGTACAGGCTTGCGCCAGAGAGCCGCTACCCTGCCGCGTTCGAGGACGGGGTCAAGGTG
CTCAAGTGGATCGCCAAGCAGGCCAATCTCGCCATGATGACCAAGGTCGGGGGTGGTGTC
GACACCTTTGGTGCATCCACTGTTGAGCCGTGGATTGCTGCACATGGTGATCCAGCTAGA
TGTGTTCTACTTGGTGCAAGCTGTGGTGCAAATATTGCTGATTATGTCACTCGGAAGGTG
GTTGAAGATGGGAAACCGTTTGACCCAATTAAGGTTGTTGCACAAGTACTGATGTATCCC
TTTTTCATAGGGAGTGTTCCGACACACTCGGAAATAAGGCTTGCGAACTCATACTTTTAT
GACAAGTCCACATGTTTACTTGCTTGGAGATTATTTTTGTCAGAGAAAGAGTTCAATCTA
GACCACCCTGCTGCGAACCCTCTGGCGCCTGGCAGAGGAGGGCCCCCACTGAAGTGCATG
CCGCCGACCTTGACAGTTATTGCCGAGCATGACTGGATGAGGGATCGAGCAATTGCTTAC
TCTGAGGAACTCCGCAAGGTTAATGTTGACTCGCCGGTTCTTGACTACAAGGATACAGTT
CACGAGTTTGCAACCCTGGATGTGTTCCTAAAAACACCACAGGCACAGGCCTGTGCTGAG
GATATTGCCATATGGATGAAGAAATATATCTCCCTCCGAGGGCATGAGTTCTCATATTAG

Peptide Sequence

PEP ID

OQU88056
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:70315424:70318504:-1 gene:SORBI_3003G392200 transcript:OQU88056 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPSVGVKIYSVFFKLFLRHRLQSLAAAAAAAGDNLDSAAFGVSCRPDEATAPPNPAFSAS
ADGVASKDLHIDPNSSLSVRIFLPTPPPPTPHAHLLAHAPSRRASDPTPTPPAPAAGAPY
RGYLPHAVASPRAAVSARRRLPIVVQFHGGGFVTGSNTAAANDAFCRRVAKLCDAIVVAV
GYRLAPESRYPAAFEDGVKVLKWIAKQANLAMMTKVGGGVDTFGASTVEPWIAAHGDPAR
CVLLGASCGANIADYVTRKVVEDGKPFDPIKVVAQVLMYPFFIGSVPTHSEIRLANSYFY
DKSTCLLAWRLFLSEKEFNLDHPAANPLAPGRGGPPLKCMPPTLTVIAEHDWMRDRAIAY
SEELRKVNVDSPVLDYKDTVHEFATLDVFLKTPQAQACAEDIAIWMKKYISLRGHEFSY

Transcript Sequence

Transcript ID

OQU88056
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:70315424:70318504:-1 gene:SORBI_3003G392200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGCACCAAAAAAAAAAAAGAAAAAAAATGGACAGCGCAGCGGCACTGCGGCAGGGCAGTG
AAAAACTGAAGCCAGGCACACAGGACAGGAGCGGAGGCGGAGCGGGGTTTGAATTGAATC
CAGGCGAGCACCGGCGGCACCGTCACGTTGGGAGGGACGCGGCCGACGCCCGACGCACCA
GCACCTGCCTTCCCCCCGTCTTTTCCTTCCACCCTTCCTTCCTCCTCACCCACCACCATC
ACCACACCCCCTGTTTCCTCTCGATTGTTCGTTGCTTGCGTCGCCAGCCAGCCTCTTTCC
TCCTCCCCCATACCCGCCGAGTACCGCCCCACGCTGCCGCCACGCCATCGTCATCCGGGG
GCGGCCACCCGGCCAATCGCCATTTCGCTCCGCCCGCCTCGCTTTTCCCTCCCCCCAACC
ACTCCCCCTCGTCCCCGCCTCCCGCGTCACCCGACCCCAATCCGATCCTATCCCCCCACC
GGCGCCGCCCGAGATCCCGCCCCCAGGGTTCCGTCCCGTGTGATGCGCGGATCCGGCTGA
GGGGCGAGCCATGCCGAGCGTCGGCGTGAAGATCTACAGCGTCTTCTTCAAGCTCTTCCT
CCGCCACCGCCTCCAGTCGCTGGCCGCCGCCGCCGCCGCCGCGGGGGACAACCTCGACAG
CGCGGCCTTCGGGGTCTCCTGCCGCCCCGACGAGGCCACCGCGCCGCCCAACCCGGCCTT
CTCCGCCTCCGCCGACGGCGTCGCCTCCAAGGACCTCCACATCGACCCCAACTCCTCGCT
CTCCGTCCGCATCTTCCTACCCACGCCCCCGCCGCCGACCCCGCACGCGCACCTCCTCGC
GCACGCGCCCTCGCGCCGCGCCAGCGACCCCACACCGACTCCCCCCGCGCCCGCAGCCGG
CGCGCCGTACCGCGGGTACCTCCCGCACGCCGTCGCCTCGCCGCGCGCCGCCGTGTCGGC
GCGCCGGAGGCTGCCCATCGTCGTGCAGTTCCACGGCGGCGGCTTCGTCACCGGGAGCAA
CACTGCCGCGGCCAACGACGCCTTCTGCAGGAGGGTCGCCAAGCTCTGCGATGCCATTGT
CGTCGCAGTGGGGTACAGGCTTGCGCCAGAGAGCCGCTACCCTGCCGCGTTCGAGGACGG
GGTCAAGGTGCTCAAGTGGATCGCCAAGCAGGCCAATCTCGCCATGATGACCAAGGTCGG
GGGTGGTGTCGACACCTTTGGTGCATCCACTGTTGAGCCGTGGATTGCTGCACATGGTGA
TCCAGCTAGATGTGTTCTACTTGGTGCAAGCTGTGGTGCAAATATTGCTGATTATGTCAC
TCGGAAGGTGGTTGAAGATGGGAAACCGTTTGACCCAATTAAGGTTGTTGCACAAGTACT
GATGTATCCCTTTTTCATAGGGAGTGTTCCGACACACTCGGAAATAAGGCTTGCGAACTC
ATACTTTTATGACAAGTCCACATGTTTACTTGCTTGGAGATTATTTTTGTCAGAGAAAGA
GTTCAATCTAGACCACCCTGCTGCGAACCCTCTGGCGCCTGGCAGAGGAGGGCCCCCACT
GAAGTGCATGCCGCCGACCTTGACAGTTATTGCCGAGCATGACTGGATGAGGGATCGAGC
AATTGCTTACTCTGAGGAACTCCGCAAGGTTAATGTTGACTCGCCGGTTCTTGACTACAA
GGATACAGTTCACGAGTTTGCAACCCTGGATGTGTTCCTAAAAACACCACAGGCACAGGC
CTGTGCTGAGGATATTGCCATATGGATGAAGAAATATATCTCCCTCCGAGGGCATGAGTT
CTCATATTAGCTGTAGCAAAAATCATGCATTGTGAAATAGGCCCTTTACAGGGAAGCATC
AACGTGTTCTTTTCAACTGGTGGAAAGAGGGATGTTGGATTGCACTCAAGTAACCAGTTA
GCTTAATGTGAGTACTGAATCCTTCAGTGATTTTTTTGAATGTAGTGTGCAAAGTTGTAG
ACTGTAATCAAAAGATACTCTTCGCCTTGTAGAGCTCAATTCTTTCATTCCTTTTGTGCC
CTTTGTGTATTATGGAATAACTGGTGCTTGAGGTTACCATTTTTTGAGAAGAAATATCAG
TCTCAGACTCTCAGTGGCCCAGTTGTGAAGCATTGAGCATTGAGCTCCACACAACATGTA
ACCTGATCGTTCATAT