Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88041
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:70075527:70082226:1 gene:SORBI_3003G389400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAAAATAATCATGCATGTCCACCACCGAGCAAGGGAAACCTGATCACAATATTGAGT
ATCGATGGTGGTGGGGTTAAGGGTATCATCCCTGGTACCTTCCTTGCATTCCTTGAGTCT
AAACTTCAGGAGCTTGATGGGAGCAACGCACGCATAGCTAACTACTTTGATGTCATCGCT
GGCACAAGCACAGGTGGTCTTATTACTGCTATGCTAGCAGCACCATCACTGAACAATGCT
AAGCAACCATGCTATGAGGCCAAGGATATTGTGCCATTCTACCTCAAACATAGTCCTCGC
ATCTTTCCATGCAGAACTGGAATTTTGGGCTGGTTCTTCAAGATCCTGCAAATAATTAAG
ATGATAATTGGGCCAAAATATGATGGAAAGTACCTGCACAAAATGACCAATGATTTGCTG
GGCGATACGAGATTGAAAGAAACATTGACAAATGTTGTTGTTCCTACTTTTGATGTTAAG
TGCGTAAAGCCAACAATATTCAGCACATTCAAGGCGAGATCTGATACCTTGATGAATGCT
CGTCTTGGTGATGTGTGTATTGGCACATCTGCAGCACCAACAGTTCTCCCCGCACACTAT
TTTGAAACTGTGGATTATCACACTGGTTCATCACGTAGCTTCAACATTATTGATGGGGGT
CTCGCTGCAAACAATCCGACTTTGGTGGCAATGGGTGAGATAACAGAACAGATCAGACAG
AAGAGCAAGGAATTCCCTGAGACCAAGCCCTTGGACTATCATAGATATCTGGTAGTATCG
TTAGGCACAGGTCTTCCAGAGCAAGACATCAAATTTGATGCGTGTCGTGTTGCCAAGTGG
GGCATTTTTGGATGGTTTGGCCGGGAGAATACCATGCCTTTGCTGCAAATGTTCTTACAT
GCTAGCTCAGACATGACTGATAGTTATGTTGCGGACCTTTTCAAAGCAATTGGGTGCTCA
GACCAACTGCTGCGTATTCAGGACCGCAACATACCAATAGGGGCTGTGCCAGCCGACCTC
TCAACGGAGAAGAATCTTCAAGGGCTGGTTAAGATTGGAGAAAACCTTCTGCATAAGCCA
CTAAGCAAGGATGATTATAAGATCAACTACATCGAGACAGTGCCGAAAGATAGCCGTGCT
CTAACCTATGCTGGTATGCTCACACAGTTTGCAAAGCTCCTTTCTGATGAGAGGAAGCTT
AGGCTTCAGAACATGGAACTGGATGACGGTAGCAAATCCTGA

Peptide Sequence

PEP ID

OQU88041
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:70075527:70082226:1 gene:SORBI_3003G389400 transcript:OQU88041 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MENNHACPPPSKGNLITILSIDGGGVKGIIPGTFLAFLESKLQELDGSNARIANYFDVIA
GTSTGGLITAMLAAPSLNNAKQPCYEAKDIVPFYLKHSPRIFPCRTGILGWFFKILQIIK
MIIGPKYDGKYLHKMTNDLLGDTRLKETLTNVVVPTFDVKCVKPTIFSTFKARSDTLMNA
RLGDVCIGTSAAPTVLPAHYFETVDYHTGSSRSFNIIDGGLAANNPTLVAMGEITEQIRQ
KSKEFPETKPLDYHRYLVVSLGTGLPEQDIKFDACRVAKWGIFGWFGRENTMPLLQMFLH
ASSDMTDSYVADLFKAIGCSDQLLRIQDRNIPIGAVPADLSTEKNLQGLVKIGENLLHKP
LSKDDYKINYIETVPKDSRALTYAGMLTQFAKLLSDERKLRLQNMELDDGSKS

Transcript Sequence

Transcript ID

OQU88041
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:70075527:70082226:1 gene:SORBI_3003G389400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGCCGTCAGATCCGAACTGTGCGGTCCGATTGAGGAATATGGATCAGTCAAGGAGCTCCA
TCTCCGCCAGCCGACCCCGCCGCCGCGGCGACCGGCGATCTCACCTCGACAATAGCGTCT
CCGGCCTCCGCCAACCCGCTTCGTCTGAGGCCAGACCGCCTCCATGCCCACCGACCAGAG
CACTCGCGCGTTTCCCCATTCCCAAAGTCTCCGCAATCAAAACGACAAGGATAAAAGGAG
AATAGATGAGGCGCGGCGGTCGCCGCGGCATCCGATCGCTCTACAGCGCAACAGCTTCTT
CCGTGGCCGCGAACTGCTTCTGCTGCTGACTGCGGATTGAGCTAGTGATGAACAACTTCT
ATGCGTAACGCGGCACTCCGCTCCCAGAATCGCCTTACCTATTTTGGGGGGCAGAATGAT
GAGCAGCCAATGTGTTATTTGATTCAGAACTTCGTAATGCTCCTTGGGCAATTTACACGG
TATTCATGTTTCACATCACGGTTTGCTCAATTTTGAATGCTCTTTTATAGATTTTCACCA
CTTCAGTCTTGGTCAGCGTCAAAGAAAAAAAACTACTATGTCATGGTGCATTACTTCAGT
TTTTAGCAACTATGGACTGAATGCTATTTTGATCTTTCCCTACAGAAGTTTTGGCCCTAT
CATTTTTTAGGAAATTACCATGTCGTGTTTAGAATTAAATTTATAGTAGCTTACATAAAT
GCTAAAAGTAAAAAAAATTCTCTTGTTATTACAATCCTTGTCATGGTGGTGGAAGATAAT
CATAATCTGAAGTTCAGAACTTCCTATACTGTGTGTGCGCGCGCGTGCGCACGTGGGCCT
CGGCACGTGTTTCATTAAGATGAGAAGAACTTCCTTAATGTTATGTCGTGCAAGTAATCT
TCCTATGTTTCCTTTGTACATCCAGAACAGATTACAGCAGAGGACGCTAGTTCACGTCCA
AGGAGCAGGGTTCTGAGTTTATCAACAATAATGTCGAGTTGATGATTTTTCGAAGGCTCC
AAGGTTCCATTTACTCAACCTCTATTTGTTTGTCTTACTCAATCCTCAATTTGGACTAAG
ATAAGACTCAAATAAACTAAAAGCTAAAATAAAGTAGTACACTAGTACCTGACACACTAG
CTTTACAAGGTGTGAACATTACTTGACCAGTTGTGTCTCAACATGACTATTGCAGGATAA
CCAAGCTTGTACTCATATATTAGAAGTAAAGAAAAATCATAACAAAAAGAACATGGTCTT
GAAGGTGTCAAACATATGAGCAATTCCTAAAGTGTAAATTACATATCTTATTGGACAAGT
GCATAAAGACACTTCCAGAGAAGCAGTGCTGAAACCATCTCGGATAAGCTTGCCAGCAGT
TCAGCATGCCTGAGTGTAAAATATATGCAACATTCCTTGCACTACAAAAACAAAACTTTT
TGCTTTTTCAGCATGAGTTGTCTTTTGCCTCCACGCCTATAAATAGCATTTCAAAGGTCA
GAATTCATAAGTAGCTGTTAACAAAAGCTGAGAAGACAGTCATCCATCATACTTCTTTGC
CTCTGCAATGGAAAATAATCATGCATGTCCACCACCGAGCAAGGGAAACCTGATCACAAT
ATTGAGTATCGATGGTGGTGGGGTTAAGGGTATCATCCCTGGTACCTTCCTTGCATTCCT
TGAGTCTAAACTTCAGGAGCTTGATGGGAGCAACGCACGCATAGCTAACTACTTTGATGT
CATCGCTGGCACAAGCACAGGTGGTCTTATTACTGCTATGCTAGCAGCACCATCACTGAA
CAATGCTAAGCAACCATGCTATGAGGCCAAGGATATTGTGCCATTCTACCTCAAACATAG
TCCTCGCATCTTTCCATGCAGAACTGGAATTTTGGGCTGGTTCTTCAAGATCCTGCAAAT
AATTAAGATGATAATTGGGCCAAAATATGATGGAAAGTACCTGCACAAAATGACCAATGA
TTTGCTGGGCGATACGAGATTGAAAGAAACATTGACAAATGTTGTTGTTCCTACTTTTGA
TGTTAAGTGCGTAAAGCCAACAATATTCAGCACATTCAAGGCGAGATCTGATACCTTGAT
GAATGCTCGTCTTGGTGATGTGTGTATTGGCACATCTGCAGCACCAACAGTTCTCCCCGC
ACACTATTTTGAAACTGTGGATTATCACACTGGTTCATCACGTAGCTTCAACATTATTGA
TGGGGGTCTCGCTGCAAACAATCCGACTTTGGTGGCAATGGGTGAGATAACAGAACAGAT
CAGACAGAAGAGCAAGGAATTCCCTGAGACCAAGCCCTTGGACTATCATAGATATCTGGT
AGTATCGTTAGGCACAGGTCTTCCAGAGCAAGACATCAAATTTGATGCGTGTCGTGTTGC
CAAGTGGGGCATTTTTGGATGGTTTGGCCGGGAGAATACCATGCCTTTGCTGCAAATGTT
CTTACATGCTAGCTCAGACATGACTGATAGTTATGTTGCGGACCTTTTCAAAGCAATTGG
GTGCTCAGACCAACTGCTGCGTATTCAGGACCGCAACATACCAATAGGGGCTGTGCCAGC
CGACCTCTCAACGGAGAAGAATCTTCAAGGGCTGGTTAAGATTGGAGAAAACCTTCTGCA
TAAGCCACTAAGCAAGGATGATTATAAGATCAACTACATCGAGACAGTGCCGAAAGATAG
CCGTGCTCTAACCTATGCTGGTATGCTCACACAGTTTGCAAAGCTCCTTTCTGATGAGAG
GAAGCTTAGGCTTCAGAACATGGAACTGGATGACGGTAGCAAATCCTGAATCTTGAGGTC
TTCTGAAGGCATACTCCCTCCATCTTAGGAGTTGGTGTATATTACTATCAGCTGTTGTGT
CATGTGTGTATGGCAAGTTGTGAGTGCGTAAATGGTAATTGGCAAAGTGATATGGACAAA
ATAACTTTGTGAATAAGTTCTGATGGTTGCATTGCTTGGAGCCCTGTAAATGGACAAAAT
CTAATGCCCTGGTGTCTGGTTGTCTAGCTGTGTGTAATGTGAGTACTATGTATGGTATGG
TGAGTTGGTGTATCTGCATCTTAGGCAGTAAATAATGTATTGCTTGTGTATTGAAAAT