Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU88001
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:69427025:69430886:1 gene:SORBI_3003G380600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTTGAAGGTGACATTAAATGAATATTGGCTTGCCTGCATGATGGCATCCGCTAATGCA
GTTGTCCAAATTTGCCTGATTTATGTATCATCATCAGAAATCTCAACTTATCACTGTGAT
TATACCTTTGCCTCTTGGTTTCAGGAGAATTTCCATAATAATTGCCTGTTGACATCGTCT
AGTCAGAATTCAAGTCCTTTGCTATGCCCTCCATGCAATTGTGCTCAGATGGCTTTGGCT
GAAACAATAATTCCTCACCAGCCTGATGTTGACAAGCATGCTGGAGTTCTGTCCTATGAA
CTGGTTCAAGGGAACCTTGTGCAGTGGAATTCATTTATGGACAAATCAATACCTGATCCA
CCAACAGCTGTTCTTCTTCATGGAATCCTTGGGAGCAGGAAAAACTGGGGATCTTTCGCG
AAGAGATTGGCTCAGGAATTCCCAATGTGGCAGTTCCTCTTGGTTGATTTGCGCTGCCAT
GGCGACTCAGCATCAATTAAGAAGCGTGGACCACACACTGTTGCCTCAACTGCTCTTGAT
GTCCTAAAGCTGATAGTGCAGCTCAGGCTAACCCCTCGGGTTTTGGTTGGTCACAGCTTT
GGCGGAAAAGTGGCCTTGAGTATGGTAGAACAAGCTGCAAAACCACTTGCTCGTCCTGTT
AGAGTATGGGTTCTTGATGCTACGCCTGGCAAAGTTCGTGCAGGGGGAGATGGTGAAGAT
CACCCTGCTGAACTTATTGAGTTTCTCAGAAGAATGCCTGAGCAGGTTTCTTCAAAACAG
GAGGTTGTCGATGCTCTTGTTAAAGGACAATTTTCTGTGGATGTTGCACGGTGGGTGGCC
ACAAATCTGCGTCGAACCAGTCCATTGGGTCAGCGATCATCTTCAAGCTTCTCATGGACT
TTTGACCTAAATGGCATCTCTGAGATGTACAAGTCCTATGAGGATACTAACTTATGGAGG
ATTGTAGAGAATGTACCAAGGGGTGTTCATATTAATTTTCTAAAAGCTGAACGAAGTTTG
CATAGATGGGCTCTTGAAGACCTCCAAAGAATTCATACTGCGGAGGAATTAGCTGCAGAT
GAGGGTGGAGGAGTTGAAATGCATGTGCTTGAAGATGCTGGACACTGGGTTCATGCAGAC
AACCCAGATGGTCTCTTTAGAATTCTGTCGTCAACCTTCCGAATCGAAACTACTATAAGA
GGAATGCAAGACTGA

Peptide Sequence

PEP ID

OQU88001
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:69427025:69430886:1 gene:SORBI_3003G380600 transcript:OQU88001 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLKVTLNEYWLACMMASANAVVQICLIYVSSSEISTYHCDYTFASWFQENFHNNCLLTSS
SQNSSPLLCPPCNCAQMALAETIIPHQPDVDKHAGVLSYELVQGNLVQWNSFMDKSIPDP
PTAVLLHGILGSRKNWGSFAKRLAQEFPMWQFLLVDLRCHGDSASIKKRGPHTVASTALD
VLKLIVQLRLTPRVLVGHSFGGKVALSMVEQAAKPLARPVRVWVLDATPGKVRAGGDGED
HPAELIEFLRRMPEQVSSKQEVVDALVKGQFSVDVARWVATNLRRTSPLGQRSSSSFSWT
FDLNGISEMYKSYEDTNLWRIVENVPRGVHINFLKAERSLHRWALEDLQRIHTAEELAAD
EGGGVEMHVLEDAGHWVHADNPDGLFRILSSTFRIETTIRGMQD

Transcript Sequence

Transcript ID

OQU88001
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:69427025:69430886:1 gene:SORBI_3003G380600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTGCCCAGATGCTGCGTTCCGTTTAGTCGTCTTGGTCCGTTGCTGGAGGAGCCAGTGCTT
GGTGGGGTTATGGGTGCTACCGCCTCGCGTTGCTGGATTTGGAGCTAAACGCGTGGTTTT
GATGCAATTTTGAGGGTGTGAGGTGGCGGGTGGTGGTGGATTGGTGATCGGCCTAATGCA
GATGCAATCGGGTCACTTCGCTGTAGAATTCCATTGCTATTGAAGCGTACAAACTGTTTG
TCGATGTATTTCTTACATTTTGGCAACTGGATTTTTTTGATTTCATAGCATGGATTGCCT
CGATTTCATTTGTCGTATGACTGTCCTCCAAAACTTTTTTTTTTCTGTCACCTAGTGGCA
CTAGAATGAAGGAAACTTTGGGGTAATGGAACTGATGATCATGGACTCACAAATCATTAG
CATTGCTTCTTATGGCCGTACTAGTGACTAGTCATTAGTTTCTTCCGTGGCAATTTTATG
TGTTTGCTGTAGTAATCACTGTCGTTTATTTAGTTTTAAGGAGGGCTCTAAACAACAAAT
CATTTCTTACTTTGACTATAACTAAATATTTCAGATCCCACATTTATTCATATTTACTAG
TTCCACTATTGTTCTGTCTTGCTACTTTTAATAAAAAAAAGAAGAGAGAGAACAAGATCA
GACATATGATGCAATAGGAGGGAGATCTGGAACTTAAATTATGGTTATGATGAAGAGATT
ACAATGTTGAAGGTGACATTAAATGAATATTGGCTTGCCTGCATGATGGCATCCGCTAAT
GCAGTTGTCCAAATTTGCCTGATTTATGTATCATCATCAGAAATCTCAACTTATCACTGT
GATTATACCTTTGCCTCTTGGTTTCAGGAGAATTTCCATAATAATTGCCTGTTGACATCG
TCTAGTCAGAATTCAAGTCCTTTGCTATGCCCTCCATGCAATTGTGCTCAGATGGCTTTG
GCTGAAACAATAATTCCTCACCAGCCTGATGTTGACAAGCATGCTGGAGTTCTGTCCTAT
GAACTGGTTCAAGGGAACCTTGTGCAGTGGAATTCATTTATGGACAAATCAATACCTGAT
CCACCAACAGCTGTTCTTCTTCATGGAATCCTTGGGAGCAGGAAAAACTGGGGATCTTTC
GCGAAGAGATTGGCTCAGGAATTCCCAATGTGGCAGTTCCTCTTGGTTGATTTGCGCTGC
CATGGCGACTCAGCATCAATTAAGAAGCGTGGACCACACACTGTTGCCTCAACTGCTCTT
GATGTCCTAAAGCTGATAGTGCAGCTCAGGCTAACCCCTCGGGTTTTGGTTGGTCACAGC
TTTGGCGGAAAAGTGGCCTTGAGTATGGTAGAACAAGCTGCAAAACCACTTGCTCGTCCT
GTTAGAGTATGGGTTCTTGATGCTACGCCTGGCAAAGTTCGTGCAGGGGGAGATGGTGAA
GATCACCCTGCTGAACTTATTGAGTTTCTCAGAAGAATGCCTGAGCAGGTTTCTTCAAAA
CAGGAGGTTGTCGATGCTCTTGTTAAAGGACAATTTTCTGTGGATGTTGCACGGTGGGTG
GCCACAAATCTGCGTCGAACCAGTCCATTGGGTCAGCGATCATCTTCAAGCTTCTCATGG
ACTTTTGACCTAAATGGCATCTCTGAGATGTACAAGTCCTATGAGGATACTAACTTATGG
AGGATTGTAGAGAATGTACCAAGGGGTGTTCATATTAATTTTCTAAAAGCTGAACGAAGT
TTGCATAGATGGGCTCTTGAAGACCTCCAAAGAATTCATACTGCGGAGGAATTAGCTGCA
GATGAGGGTGGAGGAGTTGAAATGCATGTGCTTGAAGATGCTGGACACTGGGTTCATGCA
GACAACCCAGATGGTCTCTTTAGAATTCTGTCGTCAACCTTCCGAATCGAAACTACTATA
AGAGGAATGCAAGACTGAGGATATCCAATATGAGGGGAGGCACGTCCGAATCGATTCTAC
TATAAGAGGAATACAAGAGGATCAAACCTTAATTGATCCAGTGACAATCTGAGGGGAGGC
ACTGACATTACCAGAAGATGTGTATATTACAAGCAGAGAGGGTGGAGCCATCATGTTTCT
GAATGATAGGCGTCTTTGTTCATTTGTTCATTCTTTTTTTTTAAAAAAAAACAAAGAAGA
GTAAAATGCATACTTAGTACATATAAACTTGGCAAATGGGTGCACTTAGATACATTATCT
CTCTAATTGCTCGACTCAGTTCAAGAACTTGTCAAGTGGGTGCACTTGCATGATCCTTCT
AATTGCTGAACTCAGTTCAAAAACATGCAAAGGAAAAAAAAATAGCCATACTAGTGGCCG
ATCTAGCATAGGAGGCTGTATTAATTTTAGATTGCCTCTTGGTAGTATATTGGGTTATAA
TTTAGTGCTCACTTTGGCACCGAAGAGAGAGAGAGAG