Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU87957
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:68769043:68773012:-1 gene:SORBI_3003G372400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGCCACAGCCGCCGCCACGGCCGCCGCCGCGACGACCTCCACGCCATCCACCCCC
CTCCTCCGCCGCGCCGCTGCGGCGCCGACCACAAGCCACCACTACCAGCTCAGGTGCTCC
ACCAAGCCCTCGCAGTTCGTGCTGCGGCACCGCGCCGCGCGAGTCGCTCCCGCGCGAGCT
CTGCTCCCTGACCGCGTCACGCCGTTTTCCTTCGACGCGGACGGCGACGACCATCCCCGA
GAGGAGTGCGGCGTGTTCGGAGTCATTGGCGACCCGGACGCGTCGTCGCTGTGCTACCTC
GGCCTGCAGAAGCTGCAGCACCGCGGGGAGGAGGGCGCTGGCATCGTTGCGTCGGACGCC
GACGGCAAGCTCAATTCAGTGACGGACCTGGGTCTCGTCGGGGACGTTTTCCGCGACCCG
GCGCGCCTCGCCAAGCTCCCCGGAAACGCCGCCATCGGGCACGTGCGCTACTCAACGGCC
GGCGCCTCTTCCAGGCGCAACGTGCAGCCGTTCCTCGCCGCGTACAGGTTCGGGCAGCTG
GCTGTGGCGCACAACGGCAACCTCGTGAACTACCAGGCGCTGCGCAACAAGCTGGAGGCG
CAGGGTTCCATCTTCAATACCTCGTCTGACACGGAGGTCATCCTTCACCTCATCTCAACC
TCACTCTCGCGCCCGCTGCTCTCGCGCATCTGCGACGCCTGCGAGCGCCTCGCCGGCGCG
TACTCGCTGCTGTTCCTGACGGCCGACAAGCTCTTTGCGGTGCGCGACCCCTTCGGCTTC
CGGCCCCTGGTGATGGGCCGCCGCCCCAACGGCGCCGTGGTGTTCTCGTCAGAGACCTGC
GCGCTCGACCTCATCGACGCCACCTATGAGCGTGAGGTGGAGCCCGGGGAGGTGGTAGTC
GTGGACCGCCGCGACATGTCGGTGTCCTACGCCTGCCTCGTCCCGCACCGCCCGCGCAAG
TCATGCGTGTTCGAGCACATCTACTTCGCCCTTCCAAACTCCGTCGTGTTTGGGCATGCC
GTCCACGAGCGCCGCAGCGCATACGGCCGCGCGCTCGCCGAGGAGTCCCCCGCCCCGACC
GCAGACGTCGTCATCCCCGTGCCTGACTCGGGGTTCTATGCCGCGCTCGGCTTCGCGCAG
GCGTCGGGGCTCGAGTTCCAGCAAGGCCTTATCCGGTGGCACTACAGCGGCCGCAGCTTC
ATCCAGCCATCGCAGGCAATCCGTGACCTCGCCGTCAAGCTCAAACTCGCGCCCGTACAC
GGCGTCATTACCGGCAAGAGCGTGGTCGTCGTCGATGACTCCCTCGTGCGCGGCACCACC
TCGAGCAAGATTGTGCGCCTGCTCCGCGATGCCGGCGCGCGTGAGGTGCACATGCGCATC
TCCAGCCCCCCGGTCGTCGGGTCCTGCCTCTACGGCATCGACACGCCGAGCGAAGGCGAG
CTGATATCCAACAGGATGGACCTCGAGGGTGTGAGGAGGACCATTGGCTGCGACTCGCTC
GCCTTCCTCTCGCTCGAGAAGCTCCACAGCATCTACGGCAATGAAGCACATGAGTTCTGT
GATGCCTGCTTCTCACGGAACTACCCGGTGCTGCCAACCGTGCCGGAGCTGGTCCCAGAG
CTGGTGTCTGCCTTCGAAGACTAA

Peptide Sequence

PEP ID

OQU87957
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:68769043:68773012:-1 gene:SORBI_3003G372400 transcript:OQU87957 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAATAAATAAAATTSTPSTPLLRRAAAAPTTSHHYQLRCSTKPSQFVLRHRAARVAPARA
LLPDRVTPFSFDADGDDHPREECGVFGVIGDPDASSLCYLGLQKLQHRGEEGAGIVASDA
DGKLNSVTDLGLVGDVFRDPARLAKLPGNAAIGHVRYSTAGASSRRNVQPFLAAYRFGQL
AVAHNGNLVNYQALRNKLEAQGSIFNTSSDTEVILHLISTSLSRPLLSRICDACERLAGA
YSLLFLTADKLFAVRDPFGFRPLVMGRRPNGAVVFSSETCALDLIDATYEREVEPGEVVV
VDRRDMSVSYACLVPHRPRKSCVFEHIYFALPNSVVFGHAVHERRSAYGRALAEESPAPT
ADVVIPVPDSGFYAALGFAQASGLEFQQGLIRWHYSGRSFIQPSQAIRDLAVKLKLAPVH
GVITGKSVVVVDDSLVRGTTSSKIVRLLRDAGAREVHMRISSPPVVGSCLYGIDTPSEGE
LISNRMDLEGVRRTIGCDSLAFLSLEKLHSIYGNEAHEFCDACFSRNYPVLPTVPELVPE
LVSAFED

Transcript Sequence

Transcript ID

OQU87957
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:68769043:68773012:-1 gene:SORBI_3003G372400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGCGAACCACGCATGGCCGCCACAGCCGCCGCCACGGCCGCCGCCGCGACGACCTCCACG
CCATCCACCCCCCTCCTCCGCCGCGCCGCTGCGGCGCCGACCACAAGCCACCACTACCAG
CTCAGGTGCTCCACCAAGCCCTCGCAGTTCGTGCTGCGGCACCGCGCCGCGCGAGTCGCT
CCCGCGCGAGCTCTGCTCCCTGACCGCGTCACGCCGTTTTCCTTCGACGCGGACGGCGAC
GACCATCCCCGAGAGGAGTGCGGCGTGTTCGGAGTCATTGGCGACCCGGACGCGTCGTCG
CTGTGCTACCTCGGCCTGCAGAAGCTGCAGCACCGCGGGGAGGAGGGCGCTGGCATCGTT
GCGTCGGACGCCGACGGCAAGCTCAATTCAGTGACGGACCTGGGTCTCGTCGGGGACGTT
TTCCGCGACCCGGCGCGCCTCGCCAAGCTCCCCGGAAACGCCGCCATCGGGCACGTGCGC
TACTCAACGGCCGGCGCCTCTTCCAGGCGCAACGTGCAGCCGTTCCTCGCCGCGTACAGG
TTCGGGCAGCTGGCTGTGGCGCACAACGGCAACCTCGTGAACTACCAGGCGCTGCGCAAC
AAGCTGGAGGCGCAGGGTTCCATCTTCAATACCTCGTCTGACACGGAGGTCATCCTTCAC
CTCATCTCAACCTCACTCTCGCGCCCGCTGCTCTCGCGCATCTGCGACGCCTGCGAGCGC
CTCGCCGGCGCGTACTCGCTGCTGTTCCTGACGGCCGACAAGCTCTTTGCGGTGCGCGAC
CCCTTCGGCTTCCGGCCCCTGGTGATGGGCCGCCGCCCCAACGGCGCCGTGGTGTTCTCG
TCAGAGACCTGCGCGCTCGACCTCATCGACGCCACCTATGAGCGTGAGGTGGAGCCCGGG
GAGGTGGTAGTCGTGGACCGCCGCGACATGTCGGTGTCCTACGCCTGCCTCGTCCCGCAC
CGCCCGCGCAAGTCATGCGTGTTCGAGCACATCTACTTCGCCCTTCCAAACTCCGTCGTG
TTTGGGCATGCCGTCCACGAGCGCCGCAGCGCATACGGCCGCGCGCTCGCCGAGGAGTCC
CCCGCCCCGACCGCAGACGTCGTCATCCCCGTGCCTGACTCGGGGTTCTATGCCGCGCTC
GGCTTCGCGCAGGCGTCGGGGCTCGAGTTCCAGCAAGGCCTTATCCGGTGGCACTACAGC
GGCCGCAGCTTCATCCAGCCATCGCAGGCAATCCGTGACCTCGCCGTCAAGCTCAAACTC
GCGCCCGTACACGGCGTCATTACCGGCAAGAGCGTGGTCGTCGTCGATGACTCCCTCGTG
CGCGGCACCACCTCGAGCAAGATTGTGCGCCTGCTCCGCGATGCCGGCGCGCGTGAGGTG
CACATGCGCATCTCCAGCCCCCCGGTCGTCGGGTCCTGCCTCTACGGCATCGACACGCCG
AGCGAAGGCGAGCTGATATCCAACAGGATGGACCTCGAGGGTGTGAGGAGGACCATTGGC
TGCGACTCGCTCGCCTTCCTCTCGCTCGAGAAGCTCCACAGCATCTACGGCAATGAAGCA
CATGAGTTCTGTGATGCCTGCTTCTCACGGAACTACCCGGTGCTGCCAACCGTGCCGGAG
CTGGTCCCAGAGCTGGTGTCTGCCTTCGAAGACTAACCAGAAAGGGGGTGGCTTTATACT
CTGCATGCTTTACTATTACTATAGAATCTGGACTAAATTTTGGGCATAGCATTTTCGTCT
TTGCAATTGCATTCATCCATCTGAATTTTGAGGTTACAAGGTTTAGACACTGATCGAACT
GCTATTGTGAGTTTGATCTAATCTATTGTATTGCTATATGATGACGATGACAATGAATAA
CAAGAAAATTATCTCAGCGGTTACCTTTTCACAAATTCAGGTTTAATGTGCTACTGTTTT
GAGTTTCTTCAGAGGCCGTTCTCACCTTCCTGGATACTGCTTAGCATTCAGGTTTACCTT
TTCACAAATTCAGGTTTAATGTGCTGTTGTTTTGAGTTTCTTCAGAGGCCGTTCTCACCA
TCCTGGATCCTGCTTAGCATTCTTGCATAAGTTCCGTATTTCGTTGAGTGTCTATCTCTA
ACATTGGGCCAGTTTTGGATGTGCCAACTGTGCATTCAGAGTTTAAGTTTGACCCATATT
AGTGGCGTTGTAGCTGATAGTATAGTCCTAGGCTGATGTGTAAAAGTGAGTGAAAGTTTA
TGAATGCAATTTCCTAGCATTTTTACTTTTCATCCGATGTTCCTTTTGTTCTAGACTGGG
TACAGAGATAATTTAAAATTCTTAGTTGGTACGAATTAGTTCCAAACTTTGCATCACTTC
TTTAGAATCAGGGTTTCTGAACCTTTTTCTGGAGTTGGGCTGTCCATAAAATTTTTTGAC
CAGGACTTCCTCTTTCATGGTAAATGGACATGCCAACCTCAATCACTAGTGAAGTGCCTT
CTCCAAGGTCTTGTTGAATTACAGTGCCTAGTATCTGCTACATATATTCTCAAAACCAAG
TCAAGCAAGAAAGTTCCTAGGACCTTACTGCATTAGCACTAGTGGTATGATACCCTACAC
ATTGTAATCAAGCCTGTGACTACATGCTTCATACCAATTGCCTGTCTTCCCAGTCCCACG
ATAGTCCTTTTAGATGTTCTTTTTGACAACAGTCCTTTTTAGATGTTGATTTGCATTCAA
GAAGAAGGTAATCAAAGGTAAGCAGAATGTCATGATGTTGACATGATCCTTGTTTTTTAT
TTAATACTGGCCAAACAAAACACGGTTTTGGCAGGGTTGTTTCTCATCTTATGTTGGTGC
TTGCGGTCTTCTGTCTAGTATAATATGTTGGCTCAAGCTGGTAACATGTGCAGATTTGAT
CCTTGAAATATTTGCCCCTCCTTATCGATGCTCTGATCCCATCATCTGTTTCGATCGAGA
CATGTACTACTTTCTTGATAATGGTCATCTTTGTATTGTTCCTCTGAATATATGAATGTT
ATCCATGTCTTCTTGAGAACGTGAGCTATCAGCTACTCCTTCCTTTCCAAATTATAAGTT
GCTTTGACTTTTTTAGACATTGATTTTGCTATGTATCTAGATATAACGAATGTCTAGATA
CATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATATATATATATATAACGACTTATGATTTGGAACGAAGCGAGTACTTCT
GAACTATGTGATGTTGCTCATACTCATCTGTTAAAGTACTCTTCCAAATCCATGCATTTG
TTAGGTGAACCGAACTGCAGGACCCAAGTTTTGAATGGTCAGGAGAGACTCAGCAGTCTT
CCAGTGGATGAAATGGATGAGTGGCATTGTGTGGACTTTGAGGTCGCCTTCTTTCGGCAG
GGAATATGTGCTGTTTTTCCTAGTTCGGGGTAGGCATAAAAATAAGTGCTCAACAGGATA
GGTTATTCATTTGCACCGAGCATGTCTTTCAGTGATGCCAGCTATCTGAGAATTGATTCC
GGTTATCTGAGAATTGGACATGCGTTAACTCTTTCAGTTGTTCTTCCTGCGTTAACAGCC
GCGGAGCAACGGTCATCAGAGGATTGGATGTTTAACTCTTTCAGATGTTCTTCCTGGGTT
AAAAGCCGCAGGGCAAACATGTATGCAAGTATTCTGTAACTGTAACTGCTGTCATGGGAT
AACCTTGACATTATCTCTTGTCATGCTGTTTGGCTCATATCATATCGGTCATTAGAATTA
AAGGAACTGGTTATAGCATCTCCAAGAGATTTTCATATTTTGTTTCTCAAAATATGATCT
TTGTCGACTCCTAAATTAGTATGAGAAGAAAAAAAAAGAAGTTATCTCCAAGAGTTTTCT
ATATTTCTATCCTAAAATTTGTTTTCTCGGTACTTTTTTCCTACAACCTGATCTTATATT
TTGTATTACG