Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU87885
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:67816771:67818788:1 gene:SORBI_3003G360600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCACGGTACTGGATGCCGGTGTGCTGCACTCGCACCCCTACGCCGTCGCCGCGGCG
GCAGCGGCATTGGTCTCGGCGTACATGGTGTGGTTCTGGGCGCTGACGCGGCGGCTGTCC
GGGCCGCGGATGTGGCCCCTCGTCGGCAGCCTGCCCGGCGTCGTCCTGAACCGGGCGCGC
GTCCACGACTGGATCGTCGACAACCTGCGCTCCACGGGGGAATCGGCCACGTACCAGACG
TGCATCCTGCCGCTGCCGTTCCTCGCGCAGCGCCAGGGGCTGGTGACCGTCACGTGCAAC
CCGCGGAACCTGGAGCACATCCTGCGCGCGCGTTTCGACAACTACCCCAAGGGCCCCATG
TGGCAGGCGGCGTTCCACGATCTCCTTGGCCAGGGCATCTTCAACTCCGACGGCGAGACG
TGGCTGCTCCAGCGCAAGACGGCGGCGCTCGAGTTCACCACGCGGACCTTGCGCCAGGCG
ATGGCACGCTGGGCCAACCGCATTATCAAGTACCGCCTCTGGAGTATCCTCGCCGACCAC
TGCGAAGCCGCGGCGAGCGTCGACCTCCAGGACCTGCTCTTGCGGCTCACCTTCGACAAC
ATCTGCGGCCTCACATTCGGCAAGGACCCCGAGACATTGTCGCCGGGGTTGCAGGAGAAC
CCCTTCGCCAATGCCTTCGACTCCGCTACCGAGGCGACGATGCAGAGGTTCCTGTTCCCC
AGCTTCTTGTGGCGCATCAAGAAGGCGCTCGGCGTCGGCAGCGAGCGGAACCTCCGCGAG
AGCCTCGCGATCGTGGACCAGTACATGACAGAGGCCATCGCGGCGCGCAAGGCGACGCCG
TCGGACGACCTGCTGTCCAGGTTCATGAAGAAGCGCGACGGCAACGGCAGGGCGTTCCCA
GAGGACGTGCTCCAGTGGATCGCGCTCAACTTCGTGCTCGCCGGGCGCGACACGTCGTCC
GTCGCGCTCAGCTGGTTCTTCTGGATGCTCATGCTGCGGCGCGACGTCGAGCGGAAGGTG
GTCCTGGAGATCGCCTCCGTGCTCAGGGAGACGCGGGGCGACGACACCGGGAGGTGGACC
GAGGAGCCGCTGGACTTCGACGAGCTGGATCGCCTCGTGTACCTGAAGGCGGCATTGGCG
GAGACGCTGCGGCTGTACCCGTCCGTGCCGCAGGACTCCAAGTACGTGGTGGAGGACGAC
GTGCTGCCCGATGGCACCGTGGTGCCGGCCGGCTCAGCGATCACCTACTCCATCTACTCG
GTTGGACGAATGGAGAGCATCTGGGGGAAGGACTGCGCTGAGTTCCGGCCTGAGCGGTGG
CTCTCGGCTGACGGGACCCGGTTCGAGCCGGCCAAGGACGCGTACCGCTTCGTGGCGTTC
AACGGCGGGCCGCGGACGTGCCTGGGCAAGGACCTGGCGTACCTGCAGATGAAGTCCATC
GCGTCCGCTGTGCTGCTGCGCCACTCGGTGGAGCTCGTCCCTGGGCACAAGGTGGAGCAG
AAGATGTCGCTCACTCTGTTCATGAAGAACGGCCTCCGCGTGCACGTCAAGCCGCGGGAC
CTCGCCGCCTACGTCGCGGCAGCGGAGGAAGCGCCGCAGCTGGGAGACTTTGTGATCCCG
ACCACAACTGCAGCAGCTGCATAA

Peptide Sequence

PEP ID

OQU87885
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:67816771:67818788:1 gene:SORBI_3003G360600 transcript:OQU87885 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATVLDAGVLHSHPYAVAAAAAALVSAYMVWFWALTRRLSGPRMWPLVGSLPGVVLNRAR
VHDWIVDNLRSTGESATYQTCILPLPFLAQRQGLVTVTCNPRNLEHILRARFDNYPKGPM
WQAAFHDLLGQGIFNSDGETWLLQRKTAALEFTTRTLRQAMARWANRIIKYRLWSILADH
CEAAASVDLQDLLLRLTFDNICGLTFGKDPETLSPGLQENPFANAFDSATEATMQRFLFP
SFLWRIKKALGVGSERNLRESLAIVDQYMTEAIAARKATPSDDLLSRFMKKRDGNGRAFP
EDVLQWIALNFVLAGRDTSSVALSWFFWMLMLRRDVERKVVLEIASVLRETRGDDTGRWT
EEPLDFDELDRLVYLKAALAETLRLYPSVPQDSKYVVEDDVLPDGTVVPAGSAITYSIYS
VGRMESIWGKDCAEFRPERWLSADGTRFEPAKDAYRFVAFNGGPRTCLGKDLAYLQMKSI
ASAVLLRHSVELVPGHKVEQKMSLTLFMKNGLRVHVKPRDLAAYVAAAEEAPQLGDFVIP
TTTAAAA

Transcript Sequence

Transcript ID

OQU87885
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:67816771:67818788:1 gene:SORBI_3003G360600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACTCACCAAGAACAGCGCCATTTCTTAATCGCAGCGCCTAAACCCAGCCCTCCTAATTA
TATCGCCACAGTGCTGTTACAACCAGTTGCGATTACAAGCTTAAAACGCACCGGCATGGC
CACGGTACTGGATGCCGGTGTGCTGCACTCGCACCCCTACGCCGTCGCCGCGGCGGCAGC
GGCATTGGTCTCGGCGTACATGGTGTGGTTCTGGGCGCTGACGCGGCGGCTGTCCGGGCC
GCGGATGTGGCCCCTCGTCGGCAGCCTGCCCGGCGTCGTCCTGAACCGGGCGCGCGTCCA
CGACTGGATCGTCGACAACCTGCGCTCCACGGGGGAATCGGCCACGTACCAGACGTGCAT
CCTGCCGCTGCCGTTCCTCGCGCAGCGCCAGGGGCTGGTGACCGTCACGTGCAACCCGCG
GAACCTGGAGCACATCCTGCGCGCGCGTTTCGACAACTACCCCAAGGGCCCCATGTGGCA
GGCGGCGTTCCACGATCTCCTTGGCCAGGGCATCTTCAACTCCGACGGCGAGACGTGGCT
GCTCCAGCGCAAGACGGCGGCGCTCGAGTTCACCACGCGGACCTTGCGCCAGGCGATGGC
ACGCTGGGCCAACCGCATTATCAAGTACCGCCTCTGGAGTATCCTCGCCGACCACTGCGA
AGCCGCGGCGAGCGTCGACCTCCAGGACCTGCTCTTGCGGCTCACCTTCGACAACATCTG
CGGCCTCACATTCGGCAAGGACCCCGAGACATTGTCGCCGGGGTTGCAGGAGAACCCCTT
CGCCAATGCCTTCGACTCCGCTACCGAGGCGACGATGCAGAGGTTCCTGTTCCCCAGCTT
CTTGTGGCGCATCAAGAAGGCGCTCGGCGTCGGCAGCGAGCGGAACCTCCGCGAGAGCCT
CGCGATCGTGGACCAGTACATGACAGAGGCCATCGCGGCGCGCAAGGCGACGCCGTCGGA
CGACCTGCTGTCCAGGTTCATGAAGAAGCGCGACGGCAACGGCAGGGCGTTCCCAGAGGA
CGTGCTCCAGTGGATCGCGCTCAACTTCGTGCTCGCCGGGCGCGACACGTCGTCCGTCGC
GCTCAGCTGGTTCTTCTGGATGCTCATGCTGCGGCGCGACGTCGAGCGGAAGGTGGTCCT
GGAGATCGCCTCCGTGCTCAGGGAGACGCGGGGCGACGACACCGGGAGGTGGACCGAGGA
GCCGCTGGACTTCGACGAGCTGGATCGCCTCGTGTACCTGAAGGCGGCATTGGCGGAGAC
GCTGCGGCTGTACCCGTCCGTGCCGCAGGACTCCAAGTACGTGGTGGAGGACGACGTGCT
GCCCGATGGCACCGTGGTGCCGGCCGGCTCAGCGATCACCTACTCCATCTACTCGGTTGG
ACGAATGGAGAGCATCTGGGGGAAGGACTGCGCTGAGTTCCGGCCTGAGCGGTGGCTCTC
GGCTGACGGGACCCGGTTCGAGCCGGCCAAGGACGCGTACCGCTTCGTGGCGTTCAACGG
CGGGCCGCGGACGTGCCTGGGCAAGGACCTGGCGTACCTGCAGATGAAGTCCATCGCGTC
CGCTGTGCTGCTGCGCCACTCGGTGGAGCTCGTCCCTGGGCACAAGGTGGAGCAGAAGAT
GTCGCTCACTCTGTTCATGAAGAACGGCCTCCGCGTGCACGTCAAGCCGCGGGACCTCGC
CGCCTACGTCGCGGCAGCGGAGGAAGCGCCGCAGCTGGGAGACTTTGTGATCCCGACCAC
AACTGCAGCAGCTGCATAAGCCTTGCAGGTGCCCGCGCACATTGGTACTGGCTTCTTCGT
GCTGAAGTTCTTCTACGTGCCTCTGCCTGTCAATGTCGCATCGTTTTCTTCGTTCCCCTT
TCCCCCTCTTCATTAGACTGTTAGGTTTGTGGCTACCTGGCGTCATATGGTTGTACCTGT
GTACTTTTGTGTGGATGGATCGGATTGTCTACTTTTGTTCAGGTCTGATGAATCGACAGA
GCAATGGAGCTTTTTACTTTGCATAGACAAGTATGAAA