Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU87880
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:67683326:67685610:1 gene:SORBI_3003G359400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGCCGGCGCGGCCGGACCCTGAGCCGCCGCCCATCCACCGCCTGCTAGAGCTGATC
AAGTCCGAGCGCGACCCTGCCAACGCGCTCTCCCACCTCGAGCTCCTTGTCTCCACCCGC
CCGGCCTTCCCTCCGCCGCAGCCGCTCATCTTCCACCTCCTCCGCCGCCTCGCCACCTCC
TCCCCGTCGCACCTCCCGAGGCTGCTGGGTCTCCTCCCGCGCATGCGCCATCGGCCGCGC
TTCTCTGAGTCCGCGGCGCTCGTTGTTCTATCGGCCTTCTCCCGCGCCCTCATGCCCGAC
GCGGCCCTCGCCGCGTTCCGCGACCTCCCCTCCCTCCTCGGCTGCAACCCCGGCGTCCGC
TCCCACAACACCCTCCTTGACGCGTTTGTCCGCGCTCGTCGGTACTCCGACGCTGACGCA
TTCTTCGCCTCTCTTTCCCACGGTGCCTTCGGCCGCCGCATCGCCCCCAACCTCCAGACC
TACAACATCATTCTCCGCTCTCTTTGTGCCCGCGGAGACGTCGATCGAGCAGTGTCGCTC
TTCAGTTCTTTGCGTCGTCGTGGAGTGGCCCCCGACAGAGTAACCTACTCCACCCTCATG
TCGGGGCTGGCGAAACATGACCAGTTGGACAATGCACTTGACCTGCTCGACGAAATGCCG
AACTATGGAGTGCAGGCTGATGCTGTTTGTTACAATGCGTTGCTTAGTGGGTGTTTCAGA
ACTGGCATGTTCGAGAAAGCCATGAAGGTCTGGGAGCAACTGGTGAGGGATCCTGGTGCA
AGTCCTAACCTTGCCACATACAAAGTGATGCTTGATGGCCTGTGTAAACTTGGGAGGTTT
AAGGAGGCGGGGGAGGTATGGAGTAGGATGATGGCTAATAATCACCAAGCAGACACTGTT
ACTTATGGGATCTTGATTCATGGGCTGTGCAGATCTGGGGATGTGGATTCTGCGGCACGG
GTCTACTCAGACATGGTCAAGGCTGGGCTTGTTCTTGATGTCTCTGTGTATAATTCACTC
ATTAAGGGGTTCTGTGAAGTGGGAAGAACAGGTGAGGCTTGGAAATTCTGGGATTCCACA
GGTTTCTCTGGCATTCGTCAAATAACAACCTATAATATAATGACGAAGGGGCTGTTGGAC
AGTGGAATGGTCAGTGAAGCTACAGAGTTGCTGAAACAATTGGAGAATGATGCTTCATGC
TCCCCTGACAAGGTAACTTTTGGCACACTGATCCATGGTCTGTGTGAGAATGGCTATGCT
AACAGGGCATTTGAAATCTTGGAGGACGCACGAAATAGTGGGGAAGAGTTAGATGTGTTC
TCATACTCATCAATGATAAATAGATTTTGTAAGGATGGAAGAACACATGATGCAAATGAG
GTATATAAGAATATGGTGAAGGATGGTTGCAAACCGAATTCTCATGTTTACAATGCACTA
ATAAATGGTTTCTGCCGAGTGAGCAAGATTAATGATGCTATTAAAATTTACATTGAAATG
ACCAGCAATGGTTGTTGCCCAACCATCATCACATATAACACACTAATAGATGGTTTGTGT
AAGGCTGAAAAATATCAAGAAGCTTCAAGCTTAACAAAGGAAATGCTAGAGAGAGGTTTT
AAACCAGATATCAGAACTTATGCCTCTTTGATTCGTGGCCTTTGTCGAGACAAGAAGGTT
GATGTTGCCCTTCGTATTTGGGATGAAATTCTTGATGCGGGTCTTCAGGTTGATGTAATG
GTGCACAACATCTTAATTCATGGTCTTTGTTCTGCTGGGAAAGTAGATGAAGCCTTTTGT
ATTTATTTGGAGATGAAAGAAAAGAACTGTTCCCCAAATCTAGTGACCTATAACACATTG
ATGGATGGATTTTATGAGATTGGTTCTATTGATAAAGCAGCATCCCTTTGGACTGCCATT
TTAGATAATGGATTGAAACCAGATATTGTTACATACAATACAAGAATTAAGGGTCTGTGC
TCTTGTAATAGGACACCTGAAGGAGTCCTCTTATTGAATGAGGTGCTTGCAACAGGTATT
ATGCCAACTGTCATTACCTGGAGCATATTAGTAAGAGCTGTAATCAAATATGGTCCAATT
CAGATATGA

Peptide Sequence

PEP ID

OQU87880
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:67683326:67685610:1 gene:SORBI_3003G359400 transcript:OQU87880 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPPARPDPEPPPIHRLLELIKSERDPANALSHLELLVSTRPAFPPPQPLIFHLLRRLATS
SPSHLPRLLGLLPRMRHRPRFSESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVR
SHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSL
FSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFR
TGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTV
TYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDST
GFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYA
NRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNAL
INGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGF
KPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFC
IYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLC
SCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQI

Transcript Sequence

Transcript ID

OQU87880
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:67683326:67685610:1 gene:SORBI_3003G359400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAAATCCACAGATACTGCATTCCTGGATGTAAACTCGAATTCACGTGGAAAATCCACCAG
GTCCTCAAAACAACAAGGCACCGCCGTGCAGGGGCAGCCGGCAGTGCCCAGGTCAAAAAC
AGCCGCGCTCGATCGGAAGCCAAACGAGCACGAGGCGAGGGGCTCCTGACGGCGCGATGC
CGCCGGCGCGGCCGGACCCTGAGCCGCCGCCCATCCACCGCCTGCTAGAGCTGATCAAGT
CCGAGCGCGACCCTGCCAACGCGCTCTCCCACCTCGAGCTCCTTGTCTCCACCCGCCCGG
CCTTCCCTCCGCCGCAGCCGCTCATCTTCCACCTCCTCCGCCGCCTCGCCACCTCCTCCC
CGTCGCACCTCCCGAGGCTGCTGGGTCTCCTCCCGCGCATGCGCCATCGGCCGCGCTTCT
CTGAGTCCGCGGCGCTCGTTGTTCTATCGGCCTTCTCCCGCGCCCTCATGCCCGACGCGG
CCCTCGCCGCGTTCCGCGACCTCCCCTCCCTCCTCGGCTGCAACCCCGGCGTCCGCTCCC
ACAACACCCTCCTTGACGCGTTTGTCCGCGCTCGTCGGTACTCCGACGCTGACGCATTCT
TCGCCTCTCTTTCCCACGGTGCCTTCGGCCGCCGCATCGCCCCCAACCTCCAGACCTACA
ACATCATTCTCCGCTCTCTTTGTGCCCGCGGAGACGTCGATCGAGCAGTGTCGCTCTTCA
GTTCTTTGCGTCGTCGTGGAGTGGCCCCCGACAGAGTAACCTACTCCACCCTCATGTCGG
GGCTGGCGAAACATGACCAGTTGGACAATGCACTTGACCTGCTCGACGAAATGCCGAACT
ATGGAGTGCAGGCTGATGCTGTTTGTTACAATGCGTTGCTTAGTGGGTGTTTCAGAACTG
GCATGTTCGAGAAAGCCATGAAGGTCTGGGAGCAACTGGTGAGGGATCCTGGTGCAAGTC
CTAACCTTGCCACATACAAAGTGATGCTTGATGGCCTGTGTAAACTTGGGAGGTTTAAGG
AGGCGGGGGAGGTATGGAGTAGGATGATGGCTAATAATCACCAAGCAGACACTGTTACTT
ATGGGATCTTGATTCATGGGCTGTGCAGATCTGGGGATGTGGATTCTGCGGCACGGGTCT
ACTCAGACATGGTCAAGGCTGGGCTTGTTCTTGATGTCTCTGTGTATAATTCACTCATTA
AGGGGTTCTGTGAAGTGGGAAGAACAGGTGAGGCTTGGAAATTCTGGGATTCCACAGGTT
TCTCTGGCATTCGTCAAATAACAACCTATAATATAATGACGAAGGGGCTGTTGGACAGTG
GAATGGTCAGTGAAGCTACAGAGTTGCTGAAACAATTGGAGAATGATGCTTCATGCTCCC
CTGACAAGGTAACTTTTGGCACACTGATCCATGGTCTGTGTGAGAATGGCTATGCTAACA
GGGCATTTGAAATCTTGGAGGACGCACGAAATAGTGGGGAAGAGTTAGATGTGTTCTCAT
ACTCATCAATGATAAATAGATTTTGTAAGGATGGAAGAACACATGATGCAAATGAGGTAT
ATAAGAATATGGTGAAGGATGGTTGCAAACCGAATTCTCATGTTTACAATGCACTAATAA
ATGGTTTCTGCCGAGTGAGCAAGATTAATGATGCTATTAAAATTTACATTGAAATGACCA
GCAATGGTTGTTGCCCAACCATCATCACATATAACACACTAATAGATGGTTTGTGTAAGG
CTGAAAAATATCAAGAAGCTTCAAGCTTAACAAAGGAAATGCTAGAGAGAGGTTTTAAAC
CAGATATCAGAACTTATGCCTCTTTGATTCGTGGCCTTTGTCGAGACAAGAAGGTTGATG
TTGCCCTTCGTATTTGGGATGAAATTCTTGATGCGGGTCTTCAGGTTGATGTAATGGTGC
ACAACATCTTAATTCATGGTCTTTGTTCTGCTGGGAAAGTAGATGAAGCCTTTTGTATTT
ATTTGGAGATGAAAGAAAAGAACTGTTCCCCAAATCTAGTGACCTATAACACATTGATGG
ATGGATTTTATGAGATTGGTTCTATTGATAAAGCAGCATCCCTTTGGACTGCCATTTTAG
ATAATGGATTGAAACCAGATATTGTTACATACAATACAAGAATTAAGGGTCTGTGCTCTT
GTAATAGGACACCTGAAGGAGTCCTCTTATTGAATGAGGTGCTTGCAACAGGTATTATGC
CAACTGTCATTACCTGGAGCATATTAGTAAGAGCTGTAATCAAATATGGTCCAATTCAGA
TATGA