Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU87726
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:65460066:65465290:1 gene:SORBI_3003G329400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGACGCCAGCGCCGGCGCCCTCCCTCCGCCTCCTCCTGCTGCTACCGCTGCTCACC
GTCGCCGGCGCCGCGGTGTCTCACCCAGCGCACGAGTTCTGCGCAGTCGGGGGTGACGCC
GCCGGCTGCGGCGGCGGAGGGGACGGCACGAGGATCCTGATCAAGGGCGGGACGGTGGTG
AACGCGCACCGCGCGGAGGAGGCCGACGTATACATCGAGGACGGCGTCGTCGTCGCCGTC
CGCTCAAACATCCCGGTTGGTGCTGATAATGTCCGAGTAATCGACGCAACAGGAAAATAT
GTCATGCCAGGTGGAATTGACCCTCACACGCACCTGGAGATGGAGTTCATGGGCACCGTG
ACCATAGATGACTTCTTCAGCGGCCATGCTGCGGCGCTGGCTGGTGGGACGACGATGCAT
ATTGACTTTGTCATTCCTGTGAACGGCAACTTGACTGCAGGCTTGGAGTCCTACAAGCAC
AAGGCAGCAAAAGCTGCCATGGATTATGGCTTTCACATGGCCATTACAAAGTGGAATGAT
GAGGTTGCAAGGGAAATGGAAGTGATGGTTAAGGAACATGGAATAAATTCTTTCAAGTTT
TTCATGGCATATAAAGGCTCGTTGATGGTCACCGATGACCTCCTCCTGCAAGGCCTACAG
AAATGCAAGTCGCTTGGTGCCCTTGCTATGGTTCATGCAGAGAATGGGGATGCTGTTGCC
GAGGGACAACAGCGGATGATTGACCTTGGGATAACTGGTCCAGAAGGGCATGCTCTCTCA
AGACCTCCAATTTTAGAAGGAGAAGCAACTGCACGGGCAATCCGTTTAGCAAAGTTCATC
AATACGCCACTGTACGTTGTTCATGTGATGAGCATAGACGCGATGGATGAGATTGCCAAA
GCTAAAAGAGAAGGGCAGAGAGTCATAGGTGAACCTGTGGTTTCTGGACTAGTGCTTGAT
GATTCTTGGCTTTGGGATCCTGACTTCACAATTGCTTCAAAGTATGTGATGAGTCCTCCA
ATCCGGGAAGCAGGGCATGGTAAAGCACTCCAAGCTGCTCTTTCGTCAGGAATTTTACAG
CTTGTAGGTACTGATCACTGCACATTCAACTCCACACAGAAAGCTTTTGGTTCTGATGAT
TTTCGGAAGATTCCCAATGGTGTAAATGGTCTTGAGGAACGGATGCATATAATTTGGGAC
AGCATGGTGGAGACTGGCAAAATTTCTGTAACCGACTATGTCAGAGTGACAAGCACAGAA
TGTGCCAAGATCTTCAACATATTCCCTCGGAAAGGAGCAATCCTGGAAGGATCTGACGCA
GATATCATAATCCTGAATCCTGAAAGGAGCTTTGTGATGGGTGCTCACACTCACCATTCG
AGGTCCAACACTAATGTGTACGAGGGCAGGAAAGGAAAGGGAATGGTGGAAATCACAATC
TCAAGGGGCCGAGTGGTATGGGAGGATGGTGTTCTGAACATTACACCTGGTTCAGGAAGA
TACGTCATGATGCCACCTTTCGGCTACGTCTTTGATGGGATTCAGAGGTCCGACGCCGCC
TACAGAGCTTCCCTCCGAGCCCCTGTACAGCGTGGTAAAGCTAGTGCATAG

Peptide Sequence

PEP ID

OQU87726
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:65460066:65465290:1 gene:SORBI_3003G329400 transcript:OQU87726 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATPAPAPSLRLLLLLPLLTVAGAAVSHPAHEFCAVGGDAAGCGGGGDGTRILIKGGTVV
NAHRAEEADVYIEDGVVVAVRSNIPVGADNVRVIDATGKYVMPGGIDPHTHLEMEFMGTV
TIDDFFSGHAAALAGGTTMHIDFVIPVNGNLTAGLESYKHKAAKAAMDYGFHMAITKWND
EVAREMEVMVKEHGINSFKFFMAYKGSLMVTDDLLLQGLQKCKSLGALAMVHAENGDAVA
EGQQRMIDLGITGPEGHALSRPPILEGEATARAIRLAKFINTPLYVVHVMSIDAMDEIAK
AKREGQRVIGEPVVSGLVLDDSWLWDPDFTIASKYVMSPPIREAGHGKALQAALSSGILQ
LVGTDHCTFNSTQKAFGSDDFRKIPNGVNGLEERMHIIWDSMVETGKISVTDYVRVTSTE
CAKIFNIFPRKGAILEGSDADIIILNPERSFVMGAHTHHSRSNTNVYEGRKGKGMVEITI
SRGRVVWEDGVLNITPGSGRYVMMPPFGYVFDGIQRSDAAYRASLRAPVQRGKASA

Transcript Sequence

Transcript ID

OQU87726
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:65460066:65465290:1 gene:SORBI_3003G329400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGGCATGCTGGTGAGCTTCGCTTGTATACACAAGATTCCACACTCCTCCAAGTGAGGAAA
AGATATGCCCTATAATAATTATAAGCAATATGTTCCTTGAAGTGGCGCGCTGTCACAGTC
TGCTCCTTACACATGTATGTTAGCGTCAGCAGTTCTGTAGCCCAGTGCACAGAGGTCTTT
TGGAGCTGCTCTAGGAAGCTTCGCTTATTTTTCTGTTTAATTTAAAGCCAGGAAGAACTG
GGGGAGAATGGAAGAACCGGCTACTGTTTAGAGCCAAGGAAGCTTCGCTTATTTGACTGT
CACAAGAACTACCATCAATTGTCTACCTCATGTATGGGCCATGGGCCATTGGGCCAAGCA
ACTAGTACATCAACTGCAAGAGTTGAAGAGGCTTCCACAGGCAGACAGGAGTATCAATTA
TCAACCAGAACAACAACTCCGGCCCATGGCTCTCTCTCCTTCCTCCTCTGGATTCTTATG
TATCTCTGACTCCTATCTCTCCTATCTATCTCCAGAGCTTGCAGCTCTACTACTTTCCCT
GCTGGTGCTTCCTTCCCCAGTCTGTCTCCCTCAGTTGTATCGGACTCGGACCGCATTGGT
TCAGTTCTTGTCCGTGCTTGCTGATGGTATTAGTGTGATCGGTTGCTAACATTGACCCGC
TGAAGGAGACAGCTGAGCAGCTCATTTTGTCAGAGCACAGTGACCGGTGGTGGATACTTT
ACCTAACCATTCATCATAATCATATGTCGACTCACTGTGACAGTGCCTACTCATTGACGT
TCCTAAAGAAACGCTGAAACGTGGCCAGTTCTGTGACCTCAGAGAATGAAATCTGACGAG
GGTTCTTCATCTTTGGCAAGCAGTTGTGAAGACTCTGAGAAGCTCGACATATAGAGAAGC
TAAGCTGATTCGCAGCATACCAAGATTACTGCTGAGGCAGCGACGGACGGGTATATCAGT
ATCAAACTTTCATCAGTGGCCTGGTGACTGAGCATTTTTGCAGCCCTCATAGTTTCAGTT
TGACAGTGCTGTTTCTTTTCCTTTTGCTGAAATCTTCGTGTCTTTCAGTCTGTGTAATGT
TTGATTGGACTCCTAAGTACCACGATCCTGATGAGCTGGGTATGTGTCTTTGTTTTCTTC
GCTGATGAAATGCTGACCAATGATTTGAAACTGGTTTGGATAACACGTGTTGGCTTCCGT
GCCTTGTGTGCTTATTGTGAATTGGCCAGTCGATGGATAGATACTCCCTTTCCCTGCGAA
GTGTTCTACGACGGGTGGACTCTCTCGCCTGCTGATGGGCTAATGTCAAAGGCACGTGCA
GCAGCAGTTGCCCGCCCTGGTTATGGGTGATCGTGGCGCACATGACCGGAGCCTCACTTT
GGTGTGGCGTGAGCACGATGGACGGTGAACATGATGCGTTGCGCCGATCGGATTCGCCGT
TCTTGTGAGAGCAGCTGGTGGTCAAAAGCCTGGAATTGATGGAATTATCCGATCAGATTG
GGTGAGCCGGAGGGAGCCCAAAGTTTGCGCCGTCACAAATCCCAACCAATCGCCGAGCGA
GGCCTCGAGCTGAGCTGCTTGTGTCGATTGTTAAATACTAGCTCGCCGCGTACGACACAC
CAAGCGGGCTGCGGGCGGCGACTCTCTCATCTGCTCTGCTTCTCCACTCCGCTCCGCCGG
CAGCGCGGGCCATGGCGACGCCAGCGCCGGCGCCCTCCCTCCGCCTCCTCCTGCTGCTAC
CGCTGCTCACCGTCGCCGGCGCCGCGGTGTCTCACCCAGCGCACGAGTTCTGCGCAGTCG
GGGGTGACGCCGCCGGCTGCGGCGGCGGAGGGGACGGCACGAGGATCCTGATCAAGGGCG
GGACGGTGGTGAACGCGCACCGCGCGGAGGAGGCCGACGTATACATCGAGGACGGCGTCG
TCGTCGCCGTCCGCTCAAACATCCCGGTTGGTGCTGATAATGTCCGAGTAATCGACGCAA
CAGGAAAATATGTCATGCCAGGTGGAATTGACCCTCACACGCACCTGGAGATGGAGTTCA
TGGGCACCGTGACCATAGATGACTTCTTCAGCGGCCATGCTGCGGCGCTGGCTGGTGGGA
CGACGATGCATATTGACTTTGTCATTCCTGTGAACGGCAACTTGACTGCAGGCTTGGAGT
CCTACAAGCACAAGGCAGCAAAAGCTGCCATGGATTATGGCTTTCACATGGCCATTACAA
AGTGGAATGATGAGGTTGCAAGGGAAATGGAAGTGATGGTTAAGGAACATGGAATAAATT
CTTTCAAGTTTTTCATGGCATATAAAGGCTCGTTGATGGTCACCGATGACCTCCTCCTGC
AAGGCCTACAGAAATGCAAGTCGCTTGGTGCCCTTGCTATGGTTCATGCAGAGAATGGGG
ATGCTGTTGCCGAGGGACAACAGCGGATGATTGACCTTGGGATAACTGGTCCAGAAGGGC
ATGCTCTCTCAAGACCTCCAATTTTAGAAGGAGAAGCAACTGCACGGGCAATCCGTTTAG
CAAAGTTCATCAATACGCCACTGTACGTTGTTCATGTGATGAGCATAGACGCGATGGATG
AGATTGCCAAAGCTAAAAGAGAAGGGCAGAGAGTCATAGGTGAACCTGTGGTTTCTGGAC
TAGTGCTTGATGATTCTTGGCTTTGGGATCCTGACTTCACAATTGCTTCAAAGTATGTGA
TGAGTCCTCCAATCCGGGAAGCAGGGCATGGTAAAGCACTCCAAGCTGCTCTTTCGTCAG
GAATTTTACAGCTTGTAGGTACTGATCACTGCACATTCAACTCCACACAGAAAGCTTTTG
GTTCTGATGATTTTCGGAAGATTCCCAATGGTGTAAATGGTCTTGAGGAACGGATGCATA
TAATTTGGGACAGCATGGTGGAGACTGGCAAAATTTCTGTAACCGACTATGTCAGAGTGA
CAAGCACAGAATGTGCCAAGATCTTCAACATATTCCCTCGGAAAGGAGCAATCCTGGAAG
GATCTGACGCAGATATCATAATCCTGAATCCTGAAAGGAGCTTTGTGATGGGTGCTCACA
CTCACCATTCGAGGTCCAACACTAATGTGTACGAGGGCAGGAAAGGAAAGGGAATGGTGG
AAATCACAATCTCAAGGGGCCGAGTGGTATGGGAGGATGGTGTTCTGAACATTACACCTG
GTTCAGGAAGATACGTCATGATGCCACCTTTCGGCTACGTCTTTGATGGGATTCAGAGGT
CCGACGCCGCCTACAGAGCTTCCCTCCGAGCCCCTGTACAGCGTGGTAAAGCTAGTGCAT
AGCTTATAGCTATGACAGCTGTTGATGCCATTGACCTGGCAGTAGCCCCCATCTGATTCA
AGAACGAGTTGCTCCAAGGTGAACACCGTTTGTTCCATGTGTATTGTCTATACAGAACAC
TTTATTTAAGATCAGATTCAGGATAGGTAAAGGCCTTAGCTTGCCTATGTACATCAAACA
CATCTGTGACTTAGAAAAATTCCTAGTTTTGGTCCATTTGTGCAACTAGCAATTTGCTAT
TTCAATAAATCATATTTTCACATTTA