Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU87720
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:65220949:65224974:1 gene:SORBI_3003G326100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCGCAATTGCGCATGCAGTGTCTCCAGATGCCGTTTGAGTGGTGAAAACTACGTCCAG
ACCGGCGATCTAGCGCATCTCCCGCTTCTGTGCCACTACCCTGTCAAGGCCCAGTACCTG
AGGCACGACCCTGGCTACTTGGGCTGCAAGACCGCGGCATGCCAGAAGCGCGACGCGTCG
GGCGCCTGCAGCGTCCGCACCTGCGCCGCCACGCTCACCTTCCACGTCGTCAACTTCCGC
ACCGATGTCGAGTTCGTGCTCTTCTCCGGCGGTTTCCGGACGCCGTGCGTCCTCCAGCGG
TCCGGCGCGCTGCGGTTCGCCAACCCCGCCAGCCCGCTCTACGGCCACCTCTCCAGCACC
GACTCCACGGCAACATCGATGAGGCTTACCTGGGTGAGCGGCGACCGGAGGCCGCAGCAG
GTTCAGTACGGAGTGGGCAAGTCTGCTACTTCTCAAGTGGCAACGTTCACGCAGAATGAT
ATGTGCAGTAGCCCCTTGTTACCAAGCCCTGCCAAGGATTTCGGGTGGCATGACCCTGGC
TACATTCACACGGCCGTCATGACCGGCCTCCAGCCTTCTCAGTCCTACACCTACCGCTAC
GGAAGTGATTCTGTGGGTTGGAGTAGCACAAACAAATTCAGAATGCCACCAGCTGCAGGC
TCAGACGAGACATCATTTGTGATCTATGGTGATATGGGGAAGGCTCCGCTGGACCCATCA
GTGGAACACTACATTCAGCCTGGATCGATTTCTTTGGCCAAGGCAGTGGCTAAAGAAATT
CAGACAGGAAAGGTCGATTCAGTCTTCCACATAGGAGACATAAGCTATGCTACGGGCTTT
CTGGTTGAATGGGACTTCTTCCTAAACCTCATAGCACCAGTCGCTTCTCGAGTCCCCTAC
ATGACCGCTATTGGTAATCACGAAAGGGATTATGCAGAGTCTGGTTCTGTATATGTGACC
CCAGATTCAGGTGGTGAATGTGGAGTTGCATATGAGTCATATTTCCACATGCCAGCTGTC
AGTAAGGATAAGCCATGGTATTCAATTGAGCAAGGGAGCATTCACTTCGTCGTGATGTCA
ACTGAGCATAAGTGGTCAGAGATGTCGGAGCAGCACAAATGGATGAATCAAGATTTGTCA
TCAGTCAATAGATCGAGGACACCATGGGTAATTTTCATTGGGCATAGACCGATGTATTCA
TCCCATGTCGGAATACCAGCTAATGTAGATCCAATTTTTGTGGCCTCTGTTGAGCCACTC
TTACTCAAGTACCAGGTGGATTTGGTTTTCTTTGGCCATGTACACAACTATGAGAGGACT
TGTGCAGTATACCGGAGCATATGCAAAGGCGAGCCAAAGAAGGATGCAAGTCGAATTGAT
ACTTATGACAACAGCAAATATACTGCGCCTGTTCATGCCATCGTTGGAGCTGGAGGGTTT
AGCTTGGACAAGTTCCCTAAGATTGTGTTGAACAAGTGGAGCTTATCAAGAGTTTCAGAG
TTCGGGTATGCCAGGGTGCATGCCACAAGAGGTGATATGCTGGTTCAGTTTGTAAGCTCA
AATACTATGGAGATTCTGGACCAATTTAGAATTGTGAAGCCAGATCCGGCAAGGAGGCTA
CGGAACCAGCCAGTTCAACCATAG

Peptide Sequence

PEP ID

OQU87720
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:65220949:65224974:1 gene:SORBI_3003G326100 transcript:OQU87720 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRNCACSVSRCRLSGENYVQTGDLAHLPLLCHYPVKAQYLRHDPGYLGCKTAACQKRDAS
GACSVRTCAATLTFHVVNFRTDVEFVLFSGGFRTPCVLQRSGALRFANPASPLYGHLSST
DSTATSMRLTWVSGDRRPQQVQYGVGKSATSQVATFTQNDMCSSPLLPSPAKDFGWHDPG
YIHTAVMTGLQPSQSYTYRYGSDSVGWSSTNKFRMPPAAGSDETSFVIYGDMGKAPLDPS
VEHYIQPGSISLAKAVAKEIQTGKVDSVFHIGDISYATGFLVEWDFFLNLIAPVASRVPY
MTAIGNHERDYAESGSVYVTPDSGGECGVAYESYFHMPAVSKDKPWYSIEQGSIHFVVMS
TEHKWSEMSEQHKWMNQDLSSVNRSRTPWVIFIGHRPMYSSHVGIPANVDPIFVASVEPL
LLKYQVDLVFFGHVHNYERTCAVYRSICKGEPKKDASRIDTYDNSKYTAPVHAIVGAGGF
SLDKFPKIVLNKWSLSRVSEFGYARVHATRGDMLVQFVSSNTMEILDQFRIVKPDPARRL
RNQPVQP

Transcript Sequence

Transcript ID

OQU87720
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:65220949:65224974:1 gene:SORBI_3003G326100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGTGCATGCGCAATTGCGCATGCAGTGTCTCCAGATGCCGTTTGAGTGGTGAAAACTACG
TCCAGACCGGCGATCTAGCGCATCTCCCGCTTCTGTGCCACTACCCTGTCAAGGCCCAGT
ACCTGAGGCACGACCCTGGCTACTTGGGCTGCAAGACCGCGGCATGCCAGAAGCGCGACG
CGTCGGGCGCCTGCAGCGTCCGCACCTGCGCCGCCACGCTCACCTTCCACGTCGTCAACT
TCCGCACCGATGTCGAGTTCGTGCTCTTCTCCGGCGGTTTCCGGACGCCGTGCGTCCTCC
AGCGGTCCGGCGCGCTGCGGTTCGCCAACCCCGCCAGCCCGCTCTACGGCCACCTCTCCA
GCACCGACTCCACGGCAACATCGATGAGGCTTACCTGGGTGAGCGGCGACCGGAGGCCGC
AGCAGGTTCAGTACGGAGTGGGCAAGTCTGCTACTTCTCAAGTGGCAACGTTCACGCAGA
ATGATATGTGCAGTAGCCCCTTGTTACCAAGCCCTGCCAAGGATTTCGGGTGGCATGACC
CTGGCTACATTCACACGGCCGTCATGACCGGCCTCCAGCCTTCTCAGTCCTACACCTACC
GCTACGGAAGTGATTCTGTGGGTTGGAGTAGCACAAACAAATTCAGAATGCCACCAGCTG
CAGGCTCAGACGAGACATCATTTGTGATCTATGGTGATATGGGGAAGGCTCCGCTGGACC
CATCAGTGGAACACTACATTCAGCCTGGATCGATTTCTTTGGCCAAGGCAGTGGCTAAAG
AAATTCAGACAGGAAAGGTCGATTCAGTCTTCCACATAGGAGACATAAGCTATGCTACGG
GCTTTCTGGTTGAATGGGACTTCTTCCTAAACCTCATAGCACCAGTCGCTTCTCGAGTCC
CCTACATGACCGCTATTGGTAATCACGAAAGGGATTATGCAGAGTCTGGTTCTGTATATG
TGACCCCAGATTCAGGTGGTGAATGTGGAGTTGCATATGAGTCATATTTCCACATGCCAG
CTGTCAGTAAGGATAAGCCATGGTATTCAATTGAGCAAGGGAGCATTCACTTCGTCGTGA
TGTCAACTGAGCATAAGTGGTCAGAGATGTCGGAGCAGCACAAATGGATGAATCAAGATT
TGTCATCAGTCAATAGATCGAGGACACCATGGGTAATTTTCATTGGGCATAGACCGATGT
ATTCATCCCATGTCGGAATACCAGCTAATGTAGATCCAATTTTTGTGGCCTCTGTTGAGC
CACTCTTACTCAAGTACCAGGTGGATTTGGTTTTCTTTGGCCATGTACACAACTATGAGA
GGACTTGTGCAGTATACCGGAGCATATGCAAAGGCGAGCCAAAGAAGGATGCAAGTCGAA
TTGATACTTATGACAACAGCAAATATACTGCGCCTGTTCATGCCATCGTTGGAGCTGGAG
GGTTTAGCTTGGACAAGTTCCCTAAGATTGTGTTGAACAAGTGGAGCTTATCAAGAGTTT
CAGAGTTCGGGTATGCCAGGGTGCATGCCACAAGAGGTGATATGCTGGTTCAGTTTGTAA
GCTCAAATACTATGGAGATTCTGGACCAATTTAGAATTGTGAAGCCAGATCCGGCAAGGA
GGCTACGGAACCAGCCAGTTCAACCATAGCTGCAGTTTATGGAAAAGATGGAACTGGAGC
TACTTATATTTTTGTTATGCTATAAAAAATGGAGCTGAATTACACAATTCATGGACTGAT
CGTCACCGTGGCACAGTTACAATACACTTTAACTCTCTCTTTTTTTTCGCCACAGTTATA
ATTTACTGAAACATTTTATTTTGACGTACCTCAGTATACACGCATCCACTTACATATATA
GACACAAACTCATCACAGGTGCCTCTCCGATTAGCACGAGAATAAATATGAGCACAACGT
TGATGACTCGAATCCGATAGGCATGTTCCATTGTAAGGAACTTAACCAGCTGACCTTTGC
TCAGTTCGCAATCATTGAAAGTAGGGAACTAATAAAATTTTTTTCGACATCAAGTATGCT
AAAACATTACGGCAACATCTAAGCTCTGCATAATATACGCCAACACAGTTCGACTGTCCA
GCTGCGCTGACAACGAAAATTAAGCGAAAGCTACATCATGTCTCCAGGTCCC