Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU87719
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:65207836:65210956:1 gene:SORBI_3003G325900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCCCTTACTCGCCACCTCGCCGCCGGCGACATCCTCAGCGCCCTCCGCGGCGCGTCC
TGCCCGTACTCGGCACTCCGCCTCTATTCCCTCCTCCGCCTCCGGCTCCGCCCGTCGGAA
CCATCCTACTTCGCCTGGCGCGCCGCCGTGTTCACCCTGAAGCCGCTCTCCGCCGCTTCT
TCTATCCCACTCCTCACCCATTTCCACGGCCACCTACTCAGGTCCAACCTCCTCGCCTAC
CCCCACGTCGCCTCCTCGCTCCTTCGCTCCTACTCGCTCCTCTCCCCGTCCGCTGCCCAC
CAACTGTTCGATCAAATACCCTCCACCGCCTGCAACCTCTACGTCCTCAACGTCATGCTT
GCGTCACTGTGCCGCTCCTCTGACCTTGATTCTGCGCGCACATTCTTCGATGGCATCCCC
GACAAAGACGTTGTGTCTTGGTCCACCATGCTCGCTTGCTATTTCTCCAATGGTCACCTC
GCTGATGGGCTTGCATTCTTCCGTACGATGACATTCACCACCGATATTGCTGTGGATTGT
GCCATGCTCGCCACCTTCCTCACGTCCTGCGCATCAGCTGGCTTTCTACCGCTGTTCTGC
AGGGACATTCACGGTTATGCTGTACGCCACTCCATCCCTGCCAGTATGCACCTCGGAACG
GCACTCATTGATTGCTACACCAAGACCAACAACATTGACTATGCTACCCGTGTGTTTGCT
CGGATGACTAAAAGGAATGTTGTACACTGGACAATTATGATTTGTGGTATGAGTTCACAA
TTACGCAACACCGAGGCTGTTCGTCTGTTTGAGGAAATGTGTCAAAGAAGAGTGCAACCA
AATGAGATGACATTTACAGCTGTGCTCAGCGCATGTGTGAATGCTGGGATGGTGGAGAAA
GGGAGGGAGCTATTTAAGCTTATGGTTGACAGATATCGACTTGAGCCAAATATACATCAT
TATGGATGCATTGTTGATCTCTATGCGAAGGCAGGGTTGTTGGAGGATGCTTATGAGGTT
ATCAAAACCATGAAAGTGGAACCAAATGTCATCATATGGACATCATTGTTGGTGGCATGC
AAGAAGTTCAAGAATTTTGAGATCGCCGTCAAGGGGATGGAGAAAGTATTGGCACTGGAG
ATATCTGATGAAAACGCTGGATTGTATACATTGATATCTGACCTTTATGCTATGGGTGGA
CAGTGGGATGACGTGTTGAAGATTATGAGGCTGGTGGAGAAGCGTGATGTGTGGAAGAAC
ACAAGGCCACTGTCAACACGATGGAGTCCTCCGGCTCCAGGTATGCTGAAGATCAACTCT
GATGGAGCCTTCCTGCAGGATCGCGGTACTGGAGCAGCCGGGGCCGTGGTCCGTGATAGC
AGCGGCAACTTCTGTGCGGCATCAGCCCGGTGGCTGGGCCCTGTGGGCTCGGTATTGATA
GCTGAAGCGGAGGCGATTCGAGATGGTTTGCGTCTGATTCCACAAGGAACCATGGAACAC
ATCATCGGGGAGACTGATGCTCGAGAAGTGGTGGCGCTGTGGAAGAATAGGACCAGGCAA
CGGTCCGAAATTGCAGCAATCCTGAAGGAGATAGAAGAGATAGTTTCAGCCTTCACTTCT
TTCGAGTTGATTCATGTAAGACGGGAGGCAAATTCTGTAGCGCACACATGTGCCCGTTTT
GCGTCTTCTTCTCTAGATTCTCATGTTTGGTTCTCCCCCCCAAGCTTCCTGCAGCGATGC
CTGCAGTCCGATTGTAATGAACTATCCTAA

Peptide Sequence

PEP ID

OQU87719
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:65207836:65210956:1 gene:SORBI_3003G325900 transcript:OQU87719 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSLTRHLAAGDILSALRGASCPYSALRLYSLLRLRLRPSEPSYFAWRAAVFTLKPLSAAS
SIPLLTHFHGHLLRSNLLAYPHVASSLLRSYSLLSPSAAHQLFDQIPSTACNLYVLNVML
ASLCRSSDLDSARTFFDGIPDKDVVSWSTMLACYFSNGHLADGLAFFRTMTFTTDIAVDC
AMLATFLTSCASAGFLPLFCRDIHGYAVRHSIPASMHLGTALIDCYTKTNNIDYATRVFA
RMTKRNVVHWTIMICGMSSQLRNTEAVRLFEEMCQRRVQPNEMTFTAVLSACVNAGMVEK
GRELFKLMVDRYRLEPNIHHYGCIVDLYAKAGLLEDAYEVIKTMKVEPNVIIWTSLLVAC
KKFKNFEIAVKGMEKVLALEISDENAGLYTLISDLYAMGGQWDDVLKIMRLVEKRDVWKN
TRPLSTRWSPPAPGMLKINSDGAFLQDRGTGAAGAVVRDSSGNFCAASARWLGPVGSVLI
AEAEAIRDGLRLIPQGTMEHIIGETDAREVVALWKNRTRQRSEIAAILKEIEEIVSAFTS
FELIHVRREANSVAHTCARFASSSLDSHVWFSPPSFLQRCLQSDCNELS

Transcript Sequence

Transcript ID

OQU87719
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:65207836:65210956:1 gene:SORBI_3003G325900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCCTGCCCTGACGTCCAATCCGGACACGCCGCGGCGGCTCCGGCGCGGGCGCCGCGCCGC
GCCACTGCTGTCTCACCCATGTCCCTTACTCGCCACCTCGCCGCCGGCGACATCCTCAGC
GCCCTCCGCGGCGCGTCCTGCCCGTACTCGGCACTCCGCCTCTATTCCCTCCTCCGCCTC
CGGCTCCGCCCGTCGGAACCATCCTACTTCGCCTGGCGCGCCGCCGTGTTCACCCTGAAG
CCGCTCTCCGCCGCTTCTTCTATCCCACTCCTCACCCATTTCCACGGCCACCTACTCAGG
TCCAACCTCCTCGCCTACCCCCACGTCGCCTCCTCGCTCCTTCGCTCCTACTCGCTCCTC
TCCCCGTCCGCTGCCCACCAACTGTTCGATCAAATACCCTCCACCGCCTGCAACCTCTAC
GTCCTCAACGTCATGCTTGCGTCACTGTGCCGCTCCTCTGACCTTGATTCTGCGCGCACA
TTCTTCGATGGCATCCCCGACAAAGACGTTGTGTCTTGGTCCACCATGCTCGCTTGCTAT
TTCTCCAATGGTCACCTCGCTGATGGGCTTGCATTCTTCCGTACGATGACATTCACCACC
GATATTGCTGTGGATTGTGCCATGCTCGCCACCTTCCTCACGTCCTGCGCATCAGCTGGC
TTTCTACCGCTGTTCTGCAGGGACATTCACGGTTATGCTGTACGCCACTCCATCCCTGCC
AGTATGCACCTCGGAACGGCACTCATTGATTGCTACACCAAGACCAACAACATTGACTAT
GCTACCCGTGTGTTTGCTCGGATGACTAAAAGGAATGTTGTACACTGGACAATTATGATT
TGTGGTATGAGTTCACAATTACGCAACACCGAGGCTGTTCGTCTGTTTGAGGAAATGTGT
CAAAGAAGAGTGCAACCAAATGAGATGACATTTACAGCTGTGCTCAGCGCATGTGTGAAT
GCTGGGATGGTGGAGAAAGGGAGGGAGCTATTTAAGCTTATGGTTGACAGATATCGACTT
GAGCCAAATATACATCATTATGGATGCATTGTTGATCTCTATGCGAAGGCAGGGTTGTTG
GAGGATGCTTATGAGGTTATCAAAACCATGAAAGTGGAACCAAATGTCATCATATGGACA
TCATTGTTGGTGGCATGCAAGAAGTTCAAGAATTTTGAGATCGCCGTCAAGGGGATGGAG
AAAGTATTGGCACTGGAGATATCTGATGAAAACGCTGGATTGTATACATTGATATCTGAC
CTTTATGCTATGGGTGGACAGTGGGATGACGTGTTGAAGATTATGAGGCTGGTGGAGAAG
CGTGATGTGTGGAAGAACACAAGGCCACTGTCAACACGATGGAGTCCTCCGGCTCCAGGT
ATGCTGAAGATCAACTCTGATGGAGCCTTCCTGCAGGATCGCGGTACTGGAGCAGCCGGG
GCCGTGGTCCGTGATAGCAGCGGCAACTTCTGTGCGGCATCAGCCCGGTGGCTGGGCCCT
GTGGGCTCGGTATTGATAGCTGAAGCGGAGGCGATTCGAGATGGTTTGCGTCTGATTCCA
CAAGGAACCATGGAACACATCATCGGGGAGACTGATGCTCGAGAAGTGGTGGCGCTGTGG
AAGAATAGGACCAGGCAACGGTCCGAAATTGCAGCAATCCTGAAGGAGATAGAAGAGATA
GTTTCAGCCTTCACTTCTTTCGAGTTGATTCATGTAAGACGGGAGGCAAATTCTGTAGCG
CACACATGTGCCCGTTTTGCGTCTTCTTCTCTAGATTCTCATGTTTGGTTCTCCCCCCCA
AGCTTCCTGCAGCGATGCCTGCAGTCCGATTGTAATGAACTATCCTAAGTAGTGAAGCTT
TTGTTCCAAAAAAAAAAGGGTTTGTCTGCTGCAGTCAGTTGATTCTTAACTTGGTTCCAT
ACTTCTAAATATTTGGCAGAAATAGTGAACACAAGACTCTTTGATTTGTTTCATTGTGGA
GGTATTCATAGGACAGGTCTGCTTGTTGTTTGTTGTAACCCAAAAGTGGAAATTAACAAG
ATGAATACAAACTTCCACTCGAATTTTGGAATTATATTGAGATGGATTGTACTTCTATGG
CCCAGTGGGATGATTGATACACAGAAATATTGGAAGAAGGATTTAGGTGTGCATACGAAT
AAACACTCGAATTTATTTAAGCAAGCCCAGCTCATTATTGAATTCCTTGGCATCTGGATG
ACTTTGAAGTTCAAATGCACTTTTTGCAGTCGCAGTTCTGTGATCTGGGTTTCACTCTTA
TTAAACTGAAGTTGATAGATGAAATTTGAGCTTGAAATTTCATGTTGCTGATATGTTCTT
CAAAAGAATACTCAAAGGAAAGTAAGTAAAATTTGGATTCAGCTCCCACTATTGTTTTTT
ATGCACGACCATGCTCAGGCACGTAGCTTCAGCTATTGTCAATAAATTATATTGACATGG
TTTTGTTGCTAACAGTTTCCAGCTCCAGCGTCAGTAATACTTCTGTCCTGGTGCCATCTC
TGCCACTGCCTTTTATTGGACTATGGTATTGGTTGCAGGTGGGGATCGCCTCCCCCCCGT
TGACCCTCAAAAAAAAAAAAGATCGTCGTATGTGCTTACTGGTACTGGAAATTGCTTTGT
ACAGTACATTGGTAACCTGGAATTCTCTTTTCTGTACTTAGGGCCTGCTTCGCAGGGCTC
CTCTTCGGTTCCGGCTCTGGCTCCTCCGGAGGAGTACTGCCAAACGTTTTTCTGGAGAAG
CCGTTTTTTAAGTAAAAAGCATAGGAGTCCTGCCAAACAGGCCCTTAGTCGTTGTATGTA
TCAGAAGCGTTCTCAGTAGCAGATGTAAGTTGAGGACGTCTTTCTCTTTCTTTGTGATCG
AGAATCAGCATTGGCCTCTCGGGCCTTTTTTTGTTCATGGGCAGTTCCGCTCATCTCAGC
AGAAAAAACAATCATCAGTATATCTACACATATGAAGAGATAAATATTTCTTGAGGTTTC
CTCGTGCTTTGGGGGCAGTCTTTTCGGTGTAGCCCTGTAAGAAGCCTGAGAACCTGTATG
GAGTTGTTTGGGCACAGGATTATTATTGGAATTTATAGGATTTATTACTTCAAGAGTTTG
G