Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU87717
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:65196511:65199440:-1 gene:SORBI_3003G325700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGCTGGCGTCGACGGACCTCGCAGCGCTGGGCGCGGCGGACCTGGTGCGCGTCTCG
GCGTCGATCCCGCGCGCGGCTCCGCGCACCTTCGCGCTGCTCACCGCCTGCCTCGTCTTC
CCGCTCTCCTTCGCCGTGCTGGCGCACTCCCTCTTCACCCACCCCATCCTGCGCCGCATC
CAGGGCGCCACCCACAACGAGCTCGCGCAGTGGCTCAGGCTCTTCGCCTACCAGTTCCTC
TACCTCATCGTCCTCTTCACCTTCTCCCTCCTCTCCACCGCCGCCGCCGTCTTCACCGTC
GCCTCGCTCTACGCCGCCAAGCCGGCCTCCATCTCCGCCTCGCTCACCGCGCTGCCCCCC
ATCCTGCCCCGCCTCCTCCGCACTTTCCTCTGGGTCTCCCTCCTCATGCTTGCCTACCAC
CTCGTCTTCGCGCTCACCGTCCTCCTGCTCCTCATCGTCTTCATCCCCAACGCGTCCGAG
TCCGCCGCGCCGCCCTCCCTCTCCTTCGTCCTCTTCCTCATCGTCGTCGTCTTCGTCTTC
CTCGGGATCCACGTCTACATCTCCGCGCTGTGGCACCTCGCCAGCGTCATCTCCGTGCTC
GAGCCGCTCTGCGGGCTCGCCGCCATGGCCAAGAGCAAGCAGCTGCTCCAGGGCCGCACC
GGCACTGCGGCCACGCTCGTCGTCTCCTACTTCGCGGTCTGCGGCGTCACCTCGTTGCTA
TTCCGTGCTGCTGTCGTTAAGGGGCGCGCCGAGGAGGGGAGCTTTGGCCTGGCCTTGCCC
GGTCGCCTGCTTGTCGGCGCCGTGCTGGTGTGCGTTCTTGTCTGTGTCAATTTGCTGGGA
CTGCTCGTGCAGAGCGTCTTCTACTACGCCTGCAAGGCCTTCCACAACCAGCAGATTGAC
CGGACTGCATTGTATGAGCACCTTGGAGGGTATCTTGGGGAGTACGTGCCACTCAAGAGC
AATATCCAGATGGAGAACCTTTGA

Peptide Sequence

PEP ID

OQU87717
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:65196511:65199440:-1 gene:SORBI_3003G325700 transcript:OQU87717 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MELASTDLAALGAADLVRVSASIPRAAPRTFALLTACLVFPLSFAVLAHSLFTHPILRRI
QGATHNELAQWLRLFAYQFLYLIVLFTFSLLSTAAAVFTVASLYAAKPASISASLTALPP
ILPRLLRTFLWVSLLMLAYHLVFALTVLLLLIVFIPNASESAAPPSLSFVLFLIVVVFVF
LGIHVYISALWHLASVISVLEPLCGLAAMAKSKQLLQGRTGTAATLVVSYFAVCGVTSLL
FRAAVVKGRAEEGSFGLALPGRLLVGAVLVCVLVCVNLLGLLVQSVFYYACKAFHNQQID
RTALYEHLGGYLGEYVPLKSNIQMENL

Transcript Sequence

Transcript ID

OQU87717
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:65196511:65199440:-1 gene:SORBI_3003G325700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCACTCACTCGACACGCGGTTCGCCACGGCCATTCCACGGCGGATCCCCCACCCAACTTC
TGCTGCGCGCAGCGCCGCGGCCCCCCTTTCCTAGCCCCGATTCCACCGGCCGAGCCTTCC
TCCACCACCAGCCGCGGCATACCCGCGGACCCGCCTCGCGCTCGCGCGTGAACCCCCCCG
AACTCCGCCAAATTCCCCCAAACCCGGGCCGCAAGTCCTCGCCAAATCGCCCCCAAATCA
ACCGGAGCCGAGGCCGACACAAAGCCGCGCAAGCGCAACCCGCGGCGATGGAGCTGGCGT
CGACGGACCTCGCAGCGCTGGGCGCGGCGGACCTGGTGCGCGTCTCGGCGTCGATCCCGC
GCGCGGCTCCGCGCACCTTCGCGCTGCTCACCGCCTGCCTCGTCTTCCCGCTCTCCTTCG
CCGTGCTGGCGCACTCCCTCTTCACCCACCCCATCCTGCGCCGCATCCAGGGCGCCACCC
ACAACGAGCTCGCGCAGTGGCTCAGGCTCTTCGCCTACCAGTTCCTCTACCTCATCGTCC
TCTTCACCTTCTCCCTCCTCTCCACCGCCGCCGCCGTCTTCACCGTCGCCTCGCTCTACG
CCGCCAAGCCGGCCTCCATCTCCGCCTCGCTCACCGCGCTGCCCCCCATCCTGCCCCGCC
TCCTCCGCACTTTCCTCTGGGTCTCCCTCCTCATGCTTGCCTACCACCTCGTCTTCGCGC
TCACCGTCCTCCTGCTCCTCATCGTCTTCATCCCCAACGCGTCCGAGTCCGCCGCGCCGC
CCTCCCTCTCCTTCGTCCTCTTCCTCATCGTCGTCGTCTTCGTCTTCCTCGGGATCCACG
TCTACATCTCCGCGCTGTGGCACCTCGCCAGCGTCATCTCCGTGCTCGAGCCGCTCTGCG
GGCTCGCCGCCATGGCCAAGAGCAAGCAGCTGCTCCAGGGCCGCACCGGCACTGCGGCCA
CGCTCGTCGTCTCCTACTTCGCGGTCTGCGGCGTCACCTCGTTGCTATTCCGTGCTGCTG
TCGTTAAGGGGCGCGCCGAGGAGGGGAGCTTTGGCCTGGCCTTGCCCGGTCGCCTGCTTG
TCGGCGCCGTGCTGGTGTGCGTTCTTGTCTGTGTCAATTTGCTGGGACTGCTCGTGCAGA
GCGTCTTCTACTACGCCTGCAAGGCCTTCCACAACCAGCAGATTGACCGGACTGCATTGT
ATGAGCACCTTGGAGGGTATCTTGGGGAGTACGTGCCACTCAAGAGCAATATCCAGATGG
AGAACCTTTGAGATTGGAGCATAGGGCAAGGGTAAGCTGCTCACCTCATTGCTTCATACT
AGCTGTTTCCTGTGGATCTTTCTCAAAACATGAGTATGGTTTACAAGGAGCTATCTGGTC
TTGTTATTTCTAGTACCCTGTAGTAGTTTATAATCTGTATAAGTTAAAATGCGCAGTATG
GAACCAATCTATATGGAATGGAACAGAGATGCATGAACAAGGTTGCCTTTAGTCTCACAA
ACTGTGTTCTTGTTTATCGTTGCTTTCCTATGAGTCATGCTATTGTTCGTGACTGTGATT
CATGATTTAGAGATTGAGGGTTAACATGCACTGACGCACAACTGGTTTGCTCTCTGCTAA
TGTGAGACTTGATTCTGCTCTGTGGGATGTCCATCCCTTCCGTGATCCATACCGTTTGGT
AAAAAATTGCGTTATAGATGCCCATTGTTACTCTAGACAATTTCTGTACATCAAAATCAC
GAGTTTCCCATTAGGCTTCCTATATATACCTCATGTGTTTGGAATGTTTTGAACATGCTA
GCAGAATCCATATTAGTTCATTCTATTGGGAAAATGATTGTACTATCGACTCTTGATCTG
TTGATTGCTTGGTTGAACTACAACATCCTGGTATAATGATCCTTTCTTGGGCAAAATTTA
CTTATCTGTGATTTCCAACCCATGACCATGGCAAGTGTCGCCATGATCTGCAGTATCAGA
GCCGCCACCACATCGGGCAAGCCGCATGATGTTTGTTCCTCTTTCCCTTCACAAAACAGT
GTGGCATGGGGCTGCACAGGCTTGGCACATGCCGGTGGCGACTGTGCTGGAGTCGAAGAG
GGGCGAGAGGGAGAAGGGCGAGGAGAGTGATAGTTGGGATTGGTTGGGGAGATGCAAATT
TGAGGGGGGATAAGGGACATATTGGTGGGAAAAGATTGAGGGAGAGCTATTGAGCATCGA
TGTAGCTAAGAAAAAGACTTCTATCCTCCAATATAACAGTTTTATGAGAAAGCTAAGAAC
AATACTTATCTCTGGGAATATAACAGTCGTCTGGGATAGTGGGAACATCGTTTGTAGCTA
TTTTGCTGCTTTTGCCTCATTTTTGCGTATGTTGCTGAAACTTCTGATGAGACATTTGTT
GATGCCAAGTCGGAATGCATTATGCTGTGTGACGTGATAAGTGATAACTGTAAAGTAAAG
TGGTCATGTAGCCAACTAGCCGTCTTGCGTTTGCAGTTTCTTCTTGCTGTTGAACATCTG
ATGTAAAACGAGTGTGCTCCTCTTTTTTTTTCCTGTGTATTCCTCTGCTGAACCTCGTTA
TCTACTAGTGGTTTCTGGTGTATTCCTGATACTGACTGCTGCTGTGTTGGACTGCTGGCC
ATGGGTTGTGCCTGAGGTTGTGCCGCGCCTGTGACTGCTTATAGATTCATTTTCCCCTTT
CTATTGAGCATCTTTGTATATGACTCTTGAGTCTAAGCACGGAGGTGCACTTGTTCTTTG
GGAACTGTTTTCGCAATTTTTTGTATTGTGCTTTCCATGATTTAATATAATCCAGGCCTT
ATAAAAAAGCATAGTTAACACCCAAAAGAGTGTGTTTCTTGTTTTTTTAAAAACAAGCAA
TTTTAAGTTTAGGGTCCGTTTGGTAGGGATCTAGATTTTTCTAGAAACGT