Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU87707
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:64994083:64997336:1 gene:SORBI_3003G323300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCATTGGAAACTGCAGTCCAGTTCAAAGCGCCCACACACGCCTGACCACTGTCAGCAA
TATAAAGCAGTTATCCAGGGCAGGACAGGGAATAGGACTGTTAGCAATATCCCACATGAG
ATTGAAGCTCATTCTGCAGTGCGTCAAATAGAAACAGAAATGGCAACAAAGTGGAACCAT
CAATTCATGAAAGCTTCCCAGGGTGCAGATTATGGTTACATTGAACACAATCAGAGGGAT
GCTGGTGGAGAAATCTATTCACTGAGGGAGGAGCTTATGGTAGCTCAGGACCGGATTCAT
CAGCTTGAAGCAGAGTGTCGATCTACAAAGAAGCAGCTTGATCACTTGGTGAAGAATATT
GCAGGGGAAAAGGCTTCTTTCAAGAGCAGGGAACATGATAAGTTTCACCACATCTTAGAT
GCAGTTAAGGAAGAACTGAACCGGGAGAGGAAACAGCGACAGCAGGCAGAAATGATGAAT
TCCAAACTGCACAATGATCTATCTGAGATGAAGTTTGTTGCGAAGCGTCATTTGCAAGAT
TATGAGAAGGAGAGGAAGGCACGGATGCTCATGGAAGAGGTTTGTGATGAATTAGCGAAG
GAGATCGCAGAAGACAAAGCTGAGGTTGAGGCTATGAGAAGTGAATCGATGAAGATGAGA
GATGAATTGGAGGAAGAAAAGAAGATGCTCCAGATGGCTGAGGTTTGGCGTGAAGAGAGG
GTGCAAATGAAGCTTGTTGATGCAAAATTGACACTTGAAAATAAGTACTCTCAGTTAAGC
AAACTTCAGAATGAACTTGAGGATTTCCTTTATTCCCAACCAGGCTGTAATATGGAAAAA
GGAACGGTCAGGGAAGCAGAGAGGCTCAAAGAAGCCATCTGCTTTTCGATGATAAATGGT
ATCAAGGAGTTCTCTTACAAGCCCCCTCCCCCTTCAGAAGACATTTTTGCTGTATTCGAA
GAACTCAAACAAAGAGAAGATACTGCTGAGAAGGTGATTGTGCAATGTAACGGAAATAGG
CCCAAGAGTCGTGCATCAAGAGCCCATACAGCTAGTCCTGAAACAAACATGTTCTTGGAG
AATCCACCAAGCAGATATCGCAATCAGCCTTTCACCCGAAATGAGACGGCAGAAGATGAT
AGTGGATGGGAAACTGTAAGCGAAGTTGAGGAGAATGGTAATTCACCAGGAGGAAGTGAA
CCGTCTGTAAATGGATTCTGTGGAGAAAATGGTGCTTCCGTGAGTGGAACTGATTGGGAT
GAAAACTGTGACAATGATCAGGCACGTAGTGAGATCAGTGAGGTTTGTTCAACAACAGCT
GGTAGGTCTCGGAATAAAAGATCATTCGTTGGACTATGGAGATCATCAAACACTGTAGAC
ATAAAGAAAATGGGATCCAATACACTCAATGGTAGATCATCAAATGCCAGGATGTCAAAT
GTCACTGAATCTCCTGACCTGAAGAACAGTGAAGTGTGTGACAGTCCGCACATCACAGGG
CAATGGAGGCCAGACCTGCTGAACCCGGACATCGTCCGAGCTATAAAAGGATGCATCGAC
TGGCCCCGAGGAGTGCAGAAGCACAGCTTGAAGTCCAAGATTCTAGAGGCAAGGATTGAC
GGCAGTAAGGTCCAGCTGCGTCAAGCGTTAAAGCAGAAGATATAA

Peptide Sequence

PEP ID

OQU87707
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:64994083:64997336:1 gene:SORBI_3003G323300 transcript:OQU87707 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MHWKLQSSSKRPHTPDHCQQYKAVIQGRTGNRTVSNIPHEIEAHSAVRQIETEMATKWNH
QFMKASQGADYGYIEHNQRDAGGEIYSLREELMVAQDRIHQLEAECRSTKKQLDHLVKNI
AGEKASFKSREHDKFHHILDAVKEELNRERKQRQQAEMMNSKLHNDLSEMKFVAKRHLQD
YEKERKARMLMEEVCDELAKEIAEDKAEVEAMRSESMKMRDELEEEKKMLQMAEVWREER
VQMKLVDAKLTLENKYSQLSKLQNELEDFLYSQPGCNMEKGTVREAERLKEAICFSMING
IKEFSYKPPPPSEDIFAVFEELKQREDTAEKVIVQCNGNRPKSRASRAHTASPETNMFLE
NPPSRYRNQPFTRNETAEDDSGWETVSEVEENGNSPGGSEPSVNGFCGENGASVSGTDWD
ENCDNDQARSEISEVCSTTAGRSRNKRSFVGLWRSSNTVDIKKMGSNTLNGRSSNARMSN
VTESPDLKNSEVCDSPHITGQWRPDLLNPDIVRAIKGCIDWPRGVQKHSLKSKILEARID
GSKVQLRQALKQKI

Transcript Sequence

Transcript ID

OQU87707
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:64994083:64997336:1 gene:SORBI_3003G323300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCGAGATCTCTGACAGTGATGTGCTTGTGTGTCGAGATTGTTTTGTTCTAGGGTTGTAGG
TAGATGGCGCTACTTTGGTAGCGTAGCAGCTGGTGTCGCCGTGTCGGTGGTGCACACAAC
TGACGCTTTTGGCACATAGCTCATCATTTCCTGTAGTTTTTGAGAAATGTCGGTATCGAA
TTGTTGGGGGTTGGGCGGTTGGCTGTGTCGGGTACAGACGCGCTGCTTCTCTTATCGAAG
CTGCATAGATTTTGCAGACTCATTTCGATCTGTTTAGGCATACCTCACCCCTTCGGTTAA
ACTTGCATTGTGGCTTTCCAATGGTGGTGAAACCTTTATTGTGTGTGCAGTGTTGGTGTT
TTGCTCAGACTTAGAGAAAAATGCTAATGTTTGTGCATCCATGATGAACAATTTCATGAT
TATAAGGTCAAGTTGTGCTGAAACGTTATGTTTGATAATTGATATCATTCTAAACCAATC
TCTGAGTCCAACGGTTGGAGGGATGTTCTTTGAGTCTTCTAGGAAACCGGTGCTATGGAA
CATCCTTATAGATCAGGTTTAGGGATACTCACCCACATCGAGCAAACTTTCCACTTGTGC
ATTGGAATCAGTTTGTAGATGTTGATATCCAGCTGACACTTTTAGGATATGGCTCCATTT
TCTGTTATTAAAAGGACAATATTATGCTATTTTGTCGTATGCTAGATCTAGTTAATTCAG
TTTTTGGTTCGGTCCATTTTACCTATTCTTTTGTTCAGGTTATTGATTTGACTTTTAGAT
CTGTTCATCATCATTTCAACCAAAATGATAGAGGTATTTCAACCAATGACATGATATAAG
TACTCTTAGACTTGTAGTCTTGTTTGAGTGTAGGCGTATAGGTATTGTGGCCCAGTGGTC
CCTGGATAGCCTTTTTCAATTGCTATTCTAATTGTTTGATGAAGCTAGTCTACCTTGTTA
AAGAAAAGTTTAACGAGGGCATCAATATTAATTAGGAAGCAATGCTTCAGCTGATTATTA
CTTCTCTATGTCGTATTGCCCATTTCACATGCATTCCCATAATAAGTAGATCTTTCCTTT
TTCTTGATGTAACTGTTCAGCTAACAATTCATGCATTGGAAACTGCAGTCCAGTTCAAAG
CGCCCACACACGCCTGACCACTGTCAGCAATATAAAGCAGTTATCCAGGGCAGGACAGGG
AATAGGACTGTTAGCAATATCCCACATGAGATTGAAGCTCATTCTGCAGTGCGTCAAATA
GAAACAGAAATGGCAACAAAGTGGAACCATCAATTCATGAAAGCTTCCCAGGGTGCAGAT
TATGGTTACATTGAACACAATCAGAGGGATGCTGGTGGAGAAATCTATTCACTGAGGGAG
GAGCTTATGGTAGCTCAGGACCGGATTCATCAGCTTGAAGCAGAGTGTCGATCTACAAAG
AAGCAGCTTGATCACTTGGTGAAGAATATTGCAGGGGAAAAGGCTTCTTTCAAGAGCAGG
GAACATGATAAGTTTCACCACATCTTAGATGCAGTTAAGGAAGAACTGAACCGGGAGAGG
AAACAGCGACAGCAGGCAGAAATGATGAATTCCAAACTGCACAATGATCTATCTGAGATG
AAGTTTGTTGCGAAGCGTCATTTGCAAGATTATGAGAAGGAGAGGAAGGCACGGATGCTC
ATGGAAGAGGTTTGTGATGAATTAGCGAAGGAGATCGCAGAAGACAAAGCTGAGGTTGAG
GCTATGAGAAGTGAATCGATGAAGATGAGAGATGAATTGGAGGAAGAAAAGAAGATGCTC
CAGATGGCTGAGGTTTGGCGTGAAGAGAGGGTGCAAATGAAGCTTGTTGATGCAAAATTG
ACACTTGAAAATAAGTACTCTCAGTTAAGCAAACTTCAGAATGAACTTGAGGATTTCCTT
TATTCCCAACCAGGCTGTAATATGGAAAAAGGAACGGTCAGGGAAGCAGAGAGGCTCAAA
GAAGCCATCTGCTTTTCGATGATAAATGGTATCAAGGAGTTCTCTTACAAGCCCCCTCCC
CCTTCAGAAGACATTTTTGCTGTATTCGAAGAACTCAAACAAAGAGAAGATACTGCTGAG
AAGGTGATTGTGCAATGTAACGGAAATAGGCCCAAGAGTCGTGCATCAAGAGCCCATACA
GCTAGTCCTGAAACAAACATGTTCTTGGAGAATCCACCAAGCAGATATCGCAATCAGCCT
TTCACCCGAAATGAGACGGCAGAAGATGATAGTGGATGGGAAACTGTAAGCGAAGTTGAG
GAGAATGGTAATTCACCAGGAGGAAGTGAACCGTCTGTAAATGGATTCTGTGGAGAAAAT
GGTGCTTCCGTGAGTGGAACTGATTGGGATGAAAACTGTGACAATGATCAGGCACGTAGT
GAGATCAGTGAGGTTTGTTCAACAACAGCTGGTAGGTCTCGGAATAAAAGATCATTCGTT
GGACTATGGAGATCATCAAACACTGTAGACATAAAGAAAATGGGATCCAATACACTCAAT
GGTAGATCATCAAATGCCAGGATGTCAAATGTCACTGAATCTCCTGACCTGAAGAACAGT
GAAGTGTGTGACAGTCCGCACATCACAGGGCAATGGAGGCCAGACCTGCTGAACCCGGAC
ATCGTCCGAGCTATAAAAGGATGCATCGACTGGCCCCGAGGAGTGCAGAAGCACAGCTTG
AAGTCCAAGATTCTAGAGGCAAGGATTGACGGCAGTAAGGTCCAGCTGCGTCAAGCGTTA
AAGCAGAAGATATAAGCATGGTCAGCGGGTCACATTCTTGAAGGAAAGAAAGAGATCATG
ATGCTTCTGCTAGTGGGGTTTCAGTTGGACTGCTGGAGGCCTGGTTCTGGCAGCGCCCCG
CGAGAGGAATTTCAGCAGCAGTAGGTGTTAGATTTGACCGTACCCAATCGATGCCTCACG
GCCCACCTGCTTCCTTAATGAAATTGTTAGCCCAGTGCCCGTTGTAATCACGCCTGTCCT
GTGTAGAAATATTTTGATCAATAAGCAATGAAATCATTCGACCACACTAACCGATGTCTT
GTAGGCTATGTCTGGGCCCTAAATGGCTAAATTTGTTTCCGTGTTAAGGTCCGTGGTGTT
CTTACTTCCTGTGGTGAAAGGAGTGTATAG