Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU87580
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:63215425:63221732:1 gene:SORBI_3003G301400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGGTGGCGAGGCCGGAGCCGCAGGAGCCCCGGGTGATCGCCCATGTCGACATGGAC
TGCTTCTACGTTCAAGTCGAGCAGCGGAGGAACCCGGCGCTCAGGGGCCAGCCGACCGCC
GTGGTGCAGTACAACGACTGGAAAGGCGGCGGATTGATTGCCGTCAGCTACGAGGCTCGT
GGGTTTGGTGTGAAGAGGTCCATGCGCGGAGATGAGGCCAAGAGTGTCTGTCCTGGTATT
AATCTGGTTCAGGTCCCAGTGGCGCGTGGCAAGGCCGACCTTAATCTTTACAGAAGTGCT
GGTTCTGAGGTTGTTGCAATCCTTGCAAGCAAAGGGAAGTGCGAGCGGGCATCCATTGAC
GAAGTTTATCTTGACCTTACTGATGCAGCAAAGGAAATGCTCTTACAAGCTCCCCCAGAC
TCACAAGAGGAGATTTTTATGGAGGCAGCAAAGTCAAATATCTTGGGCCTTCTGTCTGAT
GCCGGAGAGAAGGAAAAGAACGTGAGGGCATGGCTTTGTCGATCAGACGCTGATTACCAG
GACAAGTTACTGGCATGTGGAGCTATTATTGTTGCACAGTTACGAGTCAGAGTTCTGGAG
GAAACCCAATTCACATGCTCTGCTGGGATTGCTCACAATAAGATGTTAGCTAAACTTGTC
AGTGGAATGCACAAGCCTGCTCAACAAACTGTTGTCCCTTCTTCATCAGTTCAAGACTTT
CTAGCATCATTACCTGTGAAGAAGATGAAACAGCTTGGTGGTAAGCTTGGAAGTTCCTTG
CAGGATGATCTTGGGGTTGAGACCATTGGTGATCTCCTAAGTTTTACAGAGGATAAGTTA
CAAGAGCAGTATGGAGTAAATACAGGCACATGGTTATGGAAGACTGCTAGGGGCATTAGT
GGGGAAGAAGTTGAGGATCGTCTTTTACCCAAGAGTCATGGGTGTGGAAAGACATTTCCT
GGCCCAAGAGCACTGAAGAACAGCGCTTCTGTCAAAGGCTGGCTGGATCAACTCTGTGAA
GAATTAAGTGAACGGATCCAATCTGACCTGAACCAGAACAAGAGAATTGCTCAAACGCTA
ACTCTTCATGCCAGAGCATCTAAGGAAAATGAACGTGATTCAACGAAGAAATTCCCTTCC
AAATCCTGTCCTTTGCGCTATGGGACTCGGAAAATTCAGGAGGATGCAATGAAGCTATTT
GAATCTGGTCTTCACGAGTTTTTAGAATCTCAGAACACTGGATGGAGCATAACATCCCTT
TCTGTTACTGCAAGCAAAATATTTGATATACCTAGTGGAACAAGCTCAATCTTGAGATAC
ATTAAAGGTCCTAATTCTGCTGCACCTCCGGCTATACCTGATTCTTCGTCTGTACCTGAG
GATCCATCTCTTGACAACGATGTATTTGTGAAGCCAATTCATGAAGAACAATGCCAGCCA
TCTACGTCTGAGAAAGAAGACAATAATACACATTCTGTGTCTACGATTTCAGCTAAACAA
TGCCAAGCAAATAAAGAAAAAAGAATATCAAAGAAGTTGCCTGAAGTTAAGGTCCAGGGA
GTTCTTCGGAAGCAAACAAAGCTGAAGAAAACAATGTGCCTGCGGATGCTGAGGATAGGA
ACCACACCAACAGTTGTGCTGAACCCTCTGGCAGTAACACATGGATGTTCAACATTCAAG
ACATTGATCCAGCGGTGGTGGAGGAACTGCCACCAGAGATCCAAAGAGAAATACAGGGGT
GGGTCCGTCCATCGAAGCACCCGAGCACGAAGAGACGTGGTTCTACAATTTCTTCGTACT
TCCCACCCGCAAGGTCTTAGATACGTTGCTATGCTAGTTCTTCATTGTTTATTCTTTACT
CTTCTCCACACAACAACGGCCTAG

Peptide Sequence

PEP ID

OQU87580
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:63215425:63221732:1 gene:SORBI_3003G301400 transcript:OQU87580 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPVARPEPQEPRVIAHVDMDCFYVQVEQRRNPALRGQPTAVVQYNDWKGGGLIAVSYEAR
GFGVKRSMRGDEAKSVCPGINLVQVPVARGKADLNLYRSAGSEVVAILASKGKCERASID
EVYLDLTDAAKEMLLQAPPDSQEEIFMEAAKSNILGLLSDAGEKEKNVRAWLCRSDADYQ
DKLLACGAIIVAQLRVRVLEETQFTCSAGIAHNKMLAKLVSGMHKPAQQTVVPSSSVQDF
LASLPVKKMKQLGGKLGSSLQDDLGVETIGDLLSFTEDKLQEQYGVNTGTWLWKTARGIS
GEEVEDRLLPKSHGCGKTFPGPRALKNSASVKGWLDQLCEELSERIQSDLNQNKRIAQTL
TLHARASKENERDSTKKFPSKSCPLRYGTRKIQEDAMKLFESGLHEFLESQNTGWSITSL
SVTASKIFDIPSGTSSILRYIKGPNSAAPPAIPDSSSVPEDPSLDNDVFVKPIHEEQCQP
STSEKEDNNTHSVSTISAKQCQANKEKRISKKLPEVKVQGVLRKQTKLKKTMCLRMLRIG
TTPTVVLNPLAVTHGCSTFKTLIQRWWRNCHQRSKEKYRGGSVHRSTRARRDVVLQFLRT
SHPQGLRYVAMLVLHCLFFTLLHTTTA

Transcript Sequence

Transcript ID

OQU87580
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:63215425:63221732:1 gene:SORBI_3003G301400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGTTGCCCGTTCATCTTCTTCATCCTGCCAAAGAAGCTTTCCTCCAAAACTGCAAAAAGG
ACGGAGAAGGCTTCCTCCACGGCTCTGCCCATGGCCGCCGCCCGGACCTAGGCTAGGGAT
TGCTGCCTCCCGAGTCCCGACTCCCGACCTACCAAGCGGGAAAGGGAGAGGAGGCACTGT
GGCGGCTGGAAATAATTGGAAGGCGAGGACTGAGGGCGAGCGCAGAGTCCGGTGGTTATC
ATTTTCTTTTTTTTTTCTTTTTTTTTTCCGGAGGGGAGAGTATCGGGGATGCCGGTGGCG
AGGCCGGAGCCGCAGGAGCCCCGGGTGATCGCCCATGTCGACATGGACTGCTTCTACGTT
CAAGTCGAGCAGCGGAGGAACCCGGCGCTCAGGGGCCAGCCGACCGCCGTGGTGCAGTAC
AACGACTGGAAAGGCGGCGGATTGATTGCCGTCAGCTACGAGGCTCGTGGGTTTGGTGTG
AAGAGGTCCATGCGCGGAGATGAGGCCAAGAGTGTCTGTCCTGGTATTAATCTGGTTCAG
GTCCCAGTGGCGCGTGGCAAGGCCGACCTTAATCTTTACAGAAGTGCTGGTTCTGAGGTT
GTTGCAATCCTTGCAAGCAAAGGGAAGTGCGAGCGGGCATCCATTGACGAAGTTTATCTT
GACCTTACTGATGCAGCAAAGGAAATGCTCTTACAAGCTCCCCCAGACTCACAAGAGGAG
ATTTTTATGGAGGCAGCAAAGTCAAATATCTTGGGCCTTCTGTCTGATGCCGGAGAGAAG
GAAAAGAACGTGAGGGCATGGCTTTGTCGATCAGACGCTGATTACCAGGACAAGTTACTG
GCATGTGGAGCTATTATTGTTGCACAGTTACGAGTCAGAGTTCTGGAGGAAACCCAATTC
ACATGCTCTGCTGGGATTGCTCACAATAAGATGTTAGCTAAACTTGTCAGTGGAATGCAC
AAGCCTGCTCAACAAACTGTTGTCCCTTCTTCATCAGTTCAAGACTTTCTAGCATCATTA
CCTGTGAAGAAGATGAAACAGCTTGGTGGTAAGCTTGGAAGTTCCTTGCAGGATGATCTT
GGGGTTGAGACCATTGGTGATCTCCTAAGTTTTACAGAGGATAAGTTACAAGAGCAGTAT
GGAGTAAATACAGGCACATGGTTATGGAAGACTGCTAGGGGCATTAGTGGGGAAGAAGTT
GAGGATCGTCTTTTACCCAAGAGTCATGGGTGTGGAAAGACATTTCCTGGCCCAAGAGCA
CTGAAGAACAGCGCTTCTGTCAAAGGCTGGCTGGATCAACTCTGTGAAGAATTAAGTGAA
CGGATCCAATCTGACCTGAACCAGAACAAGAGAATTGCTCAAACGCTAACTCTTCATGCC
AGAGCATCTAAGGAAAATGAACGTGATTCAACGAAGAAATTCCCTTCCAAATCCTGTCCT
TTGCGCTATGGGACTCGGAAAATTCAGGAGGATGCAATGAAGCTATTTGAATCTGGTCTT
CACGAGTTTTTAGAATCTCAGAACACTGGATGGAGCATAACATCCCTTTCTGTTACTGCA
AGCAAAATATTTGATATACCTAGTGGAACAAGCTCAATCTTGAGATACATTAAAGGTCCT
AATTCTGCTGCACCTCCGGCTATACCTGATTCTTCGTCTGTACCTGAGGATCCATCTCTT
GACAACGATGTATTTGTGAAGCCAATTCATGAAGAACAATGCCAGCCATCTACGTCTGAG
AAAGAAGACAATAATACACATTCTGTGTCTACGATTTCAGCTAAACAATGCCAAGCAAAT
AAAGAAAAAAGAATATCAAAGAAGTTGCCTGAAGTTAAGGTCCAGGGAGTTCTTCGGAAG
CAAACAAAGCTGAAGAAAACAATGTGCCTGCGGATGCTGAGGATAGGAACCACACCAACA
GTTGTGCTGAACCCTCTGGCAGTAACACATGGATGTTCAACATTCAAGACATTGATCCAG
CGGTGGTGGAGGAACTGCCACCAGAGATCCAAAGAGAAATACAGGGGTGGGTCCGTCCAT
CGAAGCACCCGAGCACGAAGAGACGTGGTTCTACAATTTCTTCGTACTTCCCACCCGCAA
GGTCTTAGATACGTTGCTATGCTAGTTCTTCATTGTTTATTCTTTACTCTTCTCCACACA
ACAACGGCCTAGCTCTGTGTATTGTAATTGTAAGATGTGAAGATGTTTAGGTACCTTATA
TGTGATGAGCAGGTGGATGGGACCTTTGTGAATATAATTTTTTTTTTTTTGGGAATTTGG
TGTTTTTGCCCTTACGGGTGAAGGATGGAAACATGAACATTAATG