Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU87523
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:62531561:62535502:1 gene:SORBI_3003G292800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCTACTGCGTCCTTTGTCACCTACCTTCAGAGGCCCCGGGAGCTGCCGGTGCCGGAG
TTCCGGGCGCCGCCGCCGTCCCCGGTCACCGGCGTCCTGACTGGCAGCAGCTCGGGGTCG
TCCGGGTACGGTGAGTGCCACCAGGATGACGACGATATCGGCAGGTTCCTGCGCTGCTCC
ACCAGGGTCCCAGTGCTGCGGCTGCCGGAGAGGCCCGGCCCACGGAGAAACAAGAAGGCG
GCGGCCTGGGCACCGCCTGTCGTCGACATGCGCCTGTTGCACTCACTGTCGTCGGTGGAG
GGAGGCGGAGGGTCCGCGGTGGAGGCACTGAGGTCGGCGGCCGTCGCGTTTGGGTGCTTC
CAGGTGGTCGGCCACGGGGTCGACGCGAGCTTGCTATCGGCAGCGTTTCGTGCTGCGAGG
TCGGAGGGATCGCCGGCGCTGGAGACGGAGGGAATCCGAGCAGGAGATGAGGATGAGCTG
TGGTGGCTGCGGGGCGAAGGGGACCAAGAAATGGCGGGAACTCAGCCGTTGCGAAACGGT
CCCAACCAATTCATCAGGAACAAAGCAGATGATTTGTTTACTCAGCTTGAGCAAGCTTCA
ACCAAGCTCCTGCACGCCTTGCAGTTGCAGCAAGCCAGTGCAGCTGAACCGTTGGCTAAA
GCTGAAGCAAACGGCTCGCTTCTCTGCATCCGCGAGCACCGACGCAGCGGCAGCAGCGCG
TCCGGCGGCCCGATCAGCCAAGATGACGTCCTGCGGATGCTGGTACGGAGCTCGCGGTGC
TCGCGCGCTCTCGCTCTCCACCTCTGCCCCGGCGCGTCGGCGTTCCACGTCTTCTCGCGG
CGAGGCTGGTCCAGGTTCTCGCCCCTTGACGGCGCCCTCGTGGTCACCGTCGGGGACCAA
CCACAGTGCGGGCACTACAAAAGCGTGTCTGGCAAACCAGCTTACAGCAATGATGATCTC
CAAGGAGACAGCAGCGATGCCATCTCGGCAGAATTCTTCCTTTCCTGCTCTTCAGCAGGA
GCGGCAAAGGAGACTATGAACATGGACACCATGAAGGTCATCCCGTTGAATCTGCAGATC
ATGAAGTTACATAGAATGAACCAAGGTGCAGATCACTCACTTTGTGAAGGAAATGTGGTG
TAA

Peptide Sequence

PEP ID

OQU87523
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:62531561:62535502:1 gene:SORBI_3003G292800 transcript:OQU87523 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSTASFVTYLQRPRELPVPEFRAPPPSPVTGVLTGSSSGSSGYGECHQDDDDIGRFLRCS
TRVPVLRLPERPGPRRNKKAAAWAPPVVDMRLLHSLSSVEGGGGSAVEALRSAAVAFGCF
QVVGHGVDASLLSAAFRAARSEGSPALETEGIRAGDEDELWWLRGEGDQEMAGTQPLRNG
PNQFIRNKADDLFTQLEQASTKLLHALQLQQASAAEPLAKAEANGSLLCIREHRRSGSSA
SGGPISQDDVLRMLVRSSRCSRALALHLCPGASAFHVFSRRGWSRFSPLDGALVVTVGDQ
PQCGHYKSVSGKPAYSNDDLQGDSSDAISAEFFLSCSSAGAAKETMNMDTMKVIPLNLQI
MKLHRMNQGADHSLCEGNVV

Transcript Sequence

Transcript ID

OQU87523
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:62531561:62535502:1 gene:SORBI_3003G292800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTGTCATCTGCCGACTGCCTTCCCTGCTTGTCCCTCTTTACCACACAAAGAAAGCTAGCC
AAACAAGCTTGGAGCCCCACTTCATGCCCATTTTGATCCGTCCTTGGCTGCCACCACCAC
GCGCTCGTGTCCCTACGATTACACTGGCGAACTCAAATCAAATTCACTAGAAACTGGTAG
AATTTGGCACCTCTTATATTCAAAGCTTAGCCGTGTATATATATGACCATGACCTCCTAG
AGCACCATGACTCCATGAGCTAATAATCCAAGAAGAACCATACTGCCACTCATGTCTACT
GCGTCCTTTGTCACCTACCTTCAGAGGCCCCGGGAGCTGCCGGTGCCGGAGTTCCGGGCG
CCGCCGCCGTCCCCGGTCACCGGCGTCCTGACTGGCAGCAGCTCGGGGTCGTCCGGGTAC
GGTGAGTGCCACCAGGATGACGACGATATCGGCAGGTTCCTGCGCTGCTCCACCAGGGTC
CCAGTGCTGCGGCTGCCGGAGAGGCCCGGCCCACGGAGAAACAAGAAGGCGGCGGCCTGG
GCACCGCCTGTCGTCGACATGCGCCTGTTGCACTCACTGTCGTCGGTGGAGGGAGGCGGA
GGGTCCGCGGTGGAGGCACTGAGGTCGGCGGCCGTCGCGTTTGGGTGCTTCCAGGTGGTC
GGCCACGGGGTCGACGCGAGCTTGCTATCGGCAGCGTTTCGTGCTGCGAGGTCGGAGGGA
TCGCCGGCGCTGGAGACGGAGGGAATCCGAGCAGGAGATGAGGATGAGCTGTGGTGGCTG
CGGGGCGAAGGGGACCAAGAAATGGCGGGAACTCAGCCGTTGCGAAACGGTCCCAACCAA
TTCATCAGGAACAAAGCAGATGATTTGTTTACTCAGCTTGAGCAAGCTTCAACCAAGCTC
CTGCACGCCTTGCAGTTGCAGCAAGCCAGTGCAGCTGAACCGTTGGCTAAAGCTGAAGCA
AACGGCTCGCTTCTCTGCATCCGCGAGCACCGACGCAGCGGCAGCAGCGCGTCCGGCGGC
CCGATCAGCCAAGATGACGTCCTGCGGATGCTGGTACGGAGCTCGCGGTGCTCGCGCGCT
CTCGCTCTCCACCTCTGCCCCGGCGCGTCGGCGTTCCACGTCTTCTCGCGGCGAGGCTGG
TCCAGGTTCTCGCCCCTTGACGGCGCCCTCGTGGTCACCGTCGGGGACCAACCACAGTGC
GGGCACTACAAAAGCGTGTCTGGCAAACCAGCTTACAGCAATGATGATCTCCAAGGAGAC
AGCAGCGATGCCATCTCGGCAGAATTCTTCCTTTCCTGCTCTTCAGCAGGAGCGGCAAAG
GAGACTATGAACATGGACACCATGAAGGTCATCCCGTTGAATCTGCAGATCATGAAGTTA
CATAGAATGAACCAAGGTGCAGATCACTCACTTTGTGAAGGAAATGTGGTGTAAGCTCGT
AAACTTGGGAAGCGAAACCAGTTCCAGCATCCATGATTATAGCCCAGAGATTGGAACAAG
ATGTTATGCAACTAATAAACAGTCTATCGTCATTCCCTTTTTCAATTTG