Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU87388
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:60498606:60502602:1 gene:SORBI_3003G268300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGATGGCTGTCTTACGATCCTCCTTCCGAGAAGGCGCATCAGATAATTGCAAGAACA
GCTTTATTTGTTAGCGAGCACGGGGGACAGTCAGAGATTGTATTGAGGGTGAAACAAGGA
GATAACCCAACATTTGGATTCTTGATGCCTGATCATCATCTCCACAGCTACTTCCGCTAC
CTTGTTGATCATCCTCAACTGCTGAAAGATGGTGCTGATGCTGTTGGCACGGATAAACGT
AATACTGAGAGTGAGCATGCTTCATCTGGTGGGGCTTTATCATTGCTTGGGACCGCCTAT
GACTCAGGAGATGAGGATGAAGGCACACTCCCACGTATTTCGGAAGGCATGAATCCTGGA
AATAGCATGACCCCTGATGTCCAGGGCCACGTAAAACCTGCATCAATTATGCCTGACAAA
AAATATCTAGGCAAAGATCAGAATGCTGTCGCTCCTGCAGTTAAGAGCAAAACAATATTG
ACAAAGAAGAATCCGATTATTACTGGCAACACCATTGTTGCTGTTCAGCGTGAAAAGGTT
AATGACACAATTACAACATCAACTACATCCAAATCACATACCAATTCAGGCTTATCTGAA
AAAGAAATGATCCTTGAACCACCATCTTTCATGAAACGCACGATGGAGAAAATAATTGAG
TTTATTCTGACAAATGGGAAGGAGTTCGAAGAAAAATTGATTGAGCAAGACAGAACAACT
GGGCGATTTCCATTTCTTCTGTCTTCTAATCCATACCACTCATATTATCTAAAGTTTCTC
CAGGAAACCGAAGAGTCCAAGTCACATGGTAGAAGTCCTAATCACAACGATAGAAGAGGT
TCTTCTGACCGGAGGGGCAGAAGAAGTCCTGATAGCGATGATAGAAGCTTCCGTGAGCGT
GCCAACAGAAGCTCTCGTGAGCGCTCCGACAGAAGCGCTCGTGAGCGCGGCGACCAAAGA
TGCTCAATGGAGCGCAAAGACAGCAGTTATGGCATGGTATCCAGTGCTTCTGATAGAAGC
TTAGCTGGACCATCAGAGAAGCAGCTGTATGACAAACAAGGGAAGGGTAGATTCCATCCT
GTTTGTGGGGTCAAGAAGGAACCTACTCGGAAAGTCACCGCAGATGAAGCTGCTGCTATA
GTAATGGCGGCTACTCGTGGGCTGGGTGCTGCAAATAACTCACTTAACACCATGAAAGGA
ACCAATGACAATGTTCGCACCCATGCAAGTAATGATCCTTCTTCCAGCTTTGGAAGTTTC
TCATCTTTACAGGACCGAGATGCACTGTCCAAACATATTTCAAATAGTGAGGCTGATGCT
TCACTTACAAGTAGTGGACAGCCCCAAAAGGAAGGTTTTGGAATTATTGATGATGATTGG
ATTGCAAACACTATTGCAAAAGCTGCTGCTGCAGCAGCCTCCAAAGAGGCAGATTCTTCG
GAAGCTTCCATGACAAAGGAACAGAAGCTGAAAGCTGAGAGGCTTCGCCGTGCGAAGATG
TTTGCTGCAATCATTAAGAGTGGAGACAAGGTGAATGATTTAGCTGCAGCATCAGATCCA
ACTAGTGAAGATGCCAAGGCCATTCCTGATATGAGTGTCTCTGGACTTGATCTGCAATCT
GTAGCTAAGGAACGTGAAGGTAGCTCTGCTCCGTTTGAACACGAGGGGCCAAACTTGACA
AAGCGTAATAAAGACTCTGATGATGAACAGAACAGAGTGCGGAAGTATAGAAAGAAACAT
CAAGAATCTGATGAGGAAGAAGATGAATCAGAGGAGAGCTATAAGCACTCGAGGAAGAGG
CATCGCCCAGAGCATTCAAGAGGCCGGAGTAAGGATGTTCATAAACATAAGCACAAGAGT
CACTCCAAGGACAGGGAATCCAGACATCACAGACACCGTTATAACTCTCTGGAAGATGAG
CAGGAGCATGAACGTCGGAGTTCCAAGTCAAGGCATAGGCATAGAGATGATCACCACTAC
TCTGATGAGGAGGAACATAGGTCACATAAGCATCGGAGGAGGGAGCATCACTCCAGCTCT
AAAAGAAAGCACGAGGAAGACCGATACCAGAGTGAACAGTCTCAAGGTCGTTTAGAAGTG
TCATCCCCGTCTAGATCAGGTGCCAAGTTTGAATCAGACAAGCTGCCTGACGACACTGCA
CAATCAACTGAGGGAGCAACTGCAGTGCCGAGTGAACTGAGAGCAAAAATCAGAGCGATG
TTGCTCGAGAGATTGTAA

Peptide Sequence

PEP ID

OQU87388
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:60498606:60502602:1 gene:SORBI_3003G268300 transcript:OQU87388 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGWLSYDPPSEKAHQIIARTALFVSEHGGQSEIVLRVKQGDNPTFGFLMPDHHLHSYFRY
LVDHPQLLKDGADAVGTDKRNTESEHASSGGALSLLGTAYDSGDEDEGTLPRISEGMNPG
NSMTPDVQGHVKPASIMPDKKYLGKDQNAVAPAVKSKTILTKKNPIITGNTIVAVQREKV
NDTITTSTTSKSHTNSGLSEKEMILEPPSFMKRTMEKIIEFILTNGKEFEEKLIEQDRTT
GRFPFLLSSNPYHSYYLKFLQETEESKSHGRSPNHNDRRGSSDRRGRRSPDSDDRSFRER
ANRSSRERSDRSARERGDQRCSMERKDSSYGMVSSASDRSLAGPSEKQLYDKQGKGRFHP
VCGVKKEPTRKVTADEAAAIVMAATRGLGAANNSLNTMKGTNDNVRTHASNDPSSSFGSF
SSLQDRDALSKHISNSEADASLTSSGQPQKEGFGIIDDDWIANTIAKAAAAAASKEADSS
EASMTKEQKLKAERLRRAKMFAAIIKSGDKVNDLAAASDPTSEDAKAIPDMSVSGLDLQS
VAKEREGSSAPFEHEGPNLTKRNKDSDDEQNRVRKYRKKHQESDEEEDESEESYKHSRKR
HRPEHSRGRSKDVHKHKHKSHSKDRESRHHRHRYNSLEDEQEHERRSSKSRHRHRDDHHY
SDEEEHRSHKHRRREHHSSSKRKHEEDRYQSEQSQGRLEVSSPSRSGAKFESDKLPDDTA
QSTEGATAVPSELRAKIRAMLLERL

Transcript Sequence

Transcript ID

OQU87388
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:60498606:60502602:1 gene:SORBI_3003G268300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGATGGCTGTCTTACGATCCTCCTTCCGAGAAGGCGCATCAGATAATTGCAAGAACA
GCTTTATTTGTTAGCGAGCACGGGGGACAGTCAGAGATTGTATTGAGGGTGAAACAAGGA
GATAACCCAACATTTGGATTCTTGATGCCTGATCATCATCTCCACAGCTACTTCCGCTAC
CTTGTTGATCATCCTCAACTGCTGAAAGATGGTGCTGATGCTGTTGGCACGGATAAACGT
AATACTGAGAGTGAGCATGCTTCATCTGGTGGGGCTTTATCATTGCTTGGGACCGCCTAT
GACTCAGGAGATGAGGATGAAGGCACACTCCCACGTATTTCGGAAGGCATGAATCCTGGA
AATAGCATGACCCCTGATGTCCAGGGCCACGTAAAACCTGCATCAATTATGCCTGACAAA
AAATATCTAGGCAAAGATCAGAATGCTGTCGCTCCTGCAGTTAAGAGCAAAACAATATTG
ACAAAGAAGAATCCGATTATTACTGGCAACACCATTGTTGCTGTTCAGCGTGAAAAGGTT
AATGACACAATTACAACATCAACTACATCCAAATCACATACCAATTCAGGCTTATCTGAA
AAAGAAATGATCCTTGAACCACCATCTTTCATGAAACGCACGATGGAGAAAATAATTGAG
TTTATTCTGACAAATGGGAAGGAGTTCGAAGAAAAATTGATTGAGCAAGACAGAACAACT
GGGCGATTTCCATTTCTTCTGTCTTCTAATCCATACCACTCATATTATCTAAAGTTTCTC
CAGGAAACCGAAGAGTCCAAGTCACATGGTAGAAGTCCTAATCACAACGATAGAAGAGGT
TCTTCTGACCGGAGGGGCAGAAGAAGTCCTGATAGCGATGATAGAAGCTTCCGTGAGCGT
GCCAACAGAAGCTCTCGTGAGCGCTCCGACAGAAGCGCTCGTGAGCGCGGCGACCAAAGA
TGCTCAATGGAGCGCAAAGACAGCAGTTATGGCATGGTATCCAGTGCTTCTGATAGAAGC
TTAGCTGGACCATCAGAGAAGCAGCTGTATGACAAACAAGGGAAGGGTAGATTCCATCCT
GTTTGTGGGGTCAAGAAGGAACCTACTCGGAAAGTCACCGCAGATGAAGCTGCTGCTATA
GTAATGGCGGCTACTCGTGGGCTGGGTGCTGCAAATAACTCACTTAACACCATGAAAGGA
ACCAATGACAATGTTCGCACCCATGCAAGTAATGATCCTTCTTCCAGCTTTGGAAGTTTC
TCATCTTTACAGGACCGAGATGCACTGTCCAAACATATTTCAAATAGTGAGGCTGATGCT
TCACTTACAAGTAGTGGACAGCCCCAAAAGGAAGGTTTTGGAATTATTGATGATGATTGG
ATTGCAAACACTATTGCAAAAGCTGCTGCTGCAGCAGCCTCCAAAGAGGCAGATTCTTCG
GAAGCTTCCATGACAAAGGAACAGAAGCTGAAAGCTGAGAGGCTTCGCCGTGCGAAGATG
TTTGCTGCAATCATTAAGAGTGGAGACAAGGTGAATGATTTAGCTGCAGCATCAGATCCA
ACTAGTGAAGATGCCAAGGCCATTCCTGATATGAGTGTCTCTGGACTTGATCTGCAATCT
GTAGCTAAGGAACGTGAAGGTAGCTCTGCTCCGTTTGAACACGAGGGGCCAAACTTGACA
AAGCGTAATAAAGACTCTGATGATGAACAGAACAGAGTGCGGAAGTATAGAAAGAAACAT
CAAGAATCTGATGAGGAAGAAGATGAATCAGAGGAGAGCTATAAGCACTCGAGGAAGAGG
CATCGCCCAGAGCATTCAAGAGGCCGGAGTAAGGATGTTCATAAACATAAGCACAAGAGT
CACTCCAAGGACAGGGAATCCAGACATCACAGACACCGTTATAACTCTCTGGAAGATGAG
CAGGAGCATGAACGTCGGAGTTCCAAGTCAAGGCATAGGCATAGAGATGATCACCACTAC
TCTGATGAGGAGGAACATAGGTCACATAAGCATCGGAGGAGGGAGCATCACTCCAGCTCT
AAAAGAAAGCACGAGGAAGACCGATACCAGAGTGAACAGTCTCAAGGTCGTTTAGAAGTG
TCATCCCCGTCTAGATCAGGTGCCAAGTTTGAATCAGACAAGCTGCCTGACGACACTGCA
CAATCAACTGAGGGAGCAACTGCAGTGCCGAGTGAACTGAGAGCAAAAATCAGAGCGATG
TTGCTCGAGAGATTGTAA