Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU87349
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:59854745:59858961:1 gene:SORBI_3003G260700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGTGTGTGTGTTGCGGCGAAGTTGCGTTTGATCTGTGGAATCGCGTCTGCAGGGTGC
TGCTGCGGTGTCCCCCCTCTCGCTATGAGTAGCGCCGTGAAGGACCAGCTGCAGCAGATG
TCGACGACGTGCGATTCACTCCTGTTGGAGCTCAACGTGATTTGGGATGAGGTCGGTGAG
CCAGACATGGCGAGGGACCGGATGCTGCTGGAGCTCGAGCAGGAGTGCCTCGACGTCTAC
AGGAGGAAGGTCGACCAGGCCAATCGGTGCAGGGCCCAGTTGCGGCAGGCCATTGCGGAG
GCAGAGGCTGAACTCGCTGGCATCTGCTCGGCCATGGGCGAGCCACCGATACATGTTAGA
CAGTCAAATAAGAAGTTACATGGTTTACGAGAGGAATTGAATGCGATTGTCCCATACTTG
GAGGAGATGAGAAAGAAGAAAGTTGAAAGATGGGACCAATTTCTTGATGTCATAGAGCAA
ATTAAGAAGGTTGCATCTGAAATCAGGCCTGCAGATTTTGTACCCTTTAGAATTCCTGTG
GATCAGTCTGATCTGTCATTAAGAAAGCTGGAGGAGCTAACGAAAGAGCTACAATCCCTT
CAGAAGGAGAAGAGTGATCGGCTGAAACAAGTGATGGAACATCTTAACACTTTGCATTCG
TTATGCGAGGTGCTTGGTGTAGACTTCAAACAAACAGTATATGAGGTGCACCCTAGCCTG
GGTGAGACTGATGGATCAAAGAACCTAAGCAACAGTACAATTGAGAGTCTTGCATCTGCT
GTAAACAGATTGCGTGAATTGAAAGTCCAGAGGATGCAAAAGCTTCAAGATTTGGCATCT
AGCATGCTTGAACTTTGGAATCTCATGGATACACCACTTGAAGAGCAGCAGATGTTCCAG
AATGTAACATGCAATATTGCTGCTTCAGAACATGAAATAACTGAGCCTAACACCCTCTCT
ACCGACTTCCTCAGCTATGTGGAATCTGAAGTTTTAAGGCTTGAACAACTTAAAGCGAGC
AAGATGAAAGACCTTGTTCTGAAAAAGAAGACAGAACTGGAAGAGCATAGGAGACGTGCT
CATTTGATTGGCGAGGAGGGTTATGCAGCCGAATTTAGTGATGAGGCTATTGAGGCAGGA
GCTGTTGATCCTGCGCTGGTGCTGGAACAAATTGAGGCTCACATTGCCACAGTGAAAGAG
GAAGCTTTTAGCCGGAAGGATATCCTCGAGAAGGTTGAAAGGTGGCTGAATGCATGTGAG
GAGGAAGCTTGGCTGGAAGATTACAACAAAGATGACAATCGTTATAATGCTGGGAGAGGG
GCCCACTTGACACTCAAAAGGGCTGAGAAAGCTCGTATTTTGGTTAACAAGATCCCAGGA
CTGGTAGATGTTTTGACCACAAAAATTGTAGCTTGGGAGACAGAAAGAGGAAAAGAGTTC
ACATATGATGGTGTCCGCCTTCTGTCAATGCTTGAAGAGTACATGATTGTTCGCCAGGAG
AAAGAGCTAGAGAAGAAGAGGCAGAGGGACCAGAAGAAGATCCAGGATCAACTCAAAGCT
GAGCAGGAAGCGCTGTATGGATCAAAACCAAGTCCATCTAAGCCACAAAGCACGAAGAAG
GCACCTAGGCACTCCATGGGTGGTGCGAACCGAAGGCTGTCTCTTGGTGGACCCACAACG
CATGCCCCCAAAACAGACATAATGCACTCCAAGACAGCTCGTGCTGCCAAGAAGGCTGAA
GATTTGGGCGCTTTATCTCCTAGTAGTAGAGGCTTGGACATTGCCGGTCTTCCCGTTAAG
AAGTTATGTTTCAACGCAAGCACTCTGCGAGAGGCAGAAACACCACGCAAGCCTTTTGCC
CAGATCATGCCAGGAAACAATGTCTCATCGATTCCTGCGCGGCCTATCTCCAATGACACA
GAGGAAGAGAACAAAACCCCCAAGACATTTGCAGGGCTCAATCCAAAAACACCGGCGACA
GTGACGGCTCCTATGCAGATGGCGGCGACACCAGCTGTGGCTAACAAGGTCGTAGCCACT
CCTGAAACCCTTTTCCAGAAGGCAGAGTTACCAGCACTGCCAGCAGACATCGAGTACTCG
TTCGAAGAGAGGCGGCTCGCCCTTTACGTGGCCAGGCAAGTGGCTTAA

Peptide Sequence

PEP ID

OQU87349
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:59854745:59858961:1 gene:SORBI_3003G260700 transcript:OQU87349 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MCVCVAAKLRLICGIASAGCCCGVPPLAMSSAVKDQLQQMSTTCDSLLLELNVIWDEVGE
PDMARDRMLLELEQECLDVYRRKVDQANRCRAQLRQAIAEAEAELAGICSAMGEPPIHVR
QSNKKLHGLREELNAIVPYLEEMRKKKVERWDQFLDVIEQIKKVASEIRPADFVPFRIPV
DQSDLSLRKLEELTKELQSLQKEKSDRLKQVMEHLNTLHSLCEVLGVDFKQTVYEVHPSL
GETDGSKNLSNSTIESLASAVNRLRELKVQRMQKLQDLASSMLELWNLMDTPLEEQQMFQ
NVTCNIAASEHEITEPNTLSTDFLSYVESEVLRLEQLKASKMKDLVLKKKTELEEHRRRA
HLIGEEGYAAEFSDEAIEAGAVDPALVLEQIEAHIATVKEEAFSRKDILEKVERWLNACE
EEAWLEDYNKDDNRYNAGRGAHLTLKRAEKARILVNKIPGLVDVLTTKIVAWETERGKEF
TYDGVRLLSMLEEYMIVRQEKELEKKRQRDQKKIQDQLKAEQEALYGSKPSPSKPQSTKK
APRHSMGGANRRLSLGGPTTHAPKTDIMHSKTARAAKKAEDLGALSPSSRGLDIAGLPVK
KLCFNASTLREAETPRKPFAQIMPGNNVSSIPARPISNDTEEENKTPKTFAGLNPKTPAT
VTAPMQMAATPAVANKVVATPETLFQKAELPALPADIEYSFEERRLALYVARQVA

Transcript Sequence

Transcript ID

OQU87349
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:59854745:59858961:1 gene:SORBI_3003G260700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGGCGCAGCGTGCATCCTCCGCTGAGGGGGAAACCCTAGGCTGGGGTGGGGTTCTGCCTC
ATCCTCCTGCTCAGCGCGGTGGAACTGTTTTGCTCTGGGGTTCGTGGTGCGCGCGCTGGG
GTATGTGTGTGTGTGTTGCGGCGAAGTTGCGTTTGATCTGTGGAATCGCGTCTGCAGGGT
GCTGCTGCGGTGTCCCCCCTCTCGCTATGAGTAGCGCCGTGAAGGACCAGCTGCAGCAGA
TGTCGACGACGTGCGATTCACTCCTGTTGGAGCTCAACGTGATTTGGGATGAGGTCGGTG
AGCCAGACATGGCGAGGGACCGGATGCTGCTGGAGCTCGAGCAGGAGTGCCTCGACGTCT
ACAGGAGGAAGGTCGACCAGGCCAATCGGTGCAGGGCCCAGTTGCGGCAGGCCATTGCGG
AGGCAGAGGCTGAACTCGCTGGCATCTGCTCGGCCATGGGCGAGCCACCGATACATGTTA
GACAGTCAAATAAGAAGTTACATGGTTTACGAGAGGAATTGAATGCGATTGTCCCATACT
TGGAGGAGATGAGAAAGAAGAAAGTTGAAAGATGGGACCAATTTCTTGATGTCATAGAGC
AAATTAAGAAGGTTGCATCTGAAATCAGGCCTGCAGATTTTGTACCCTTTAGAATTCCTG
TGGATCAGTCTGATCTGTCATTAAGAAAGCTGGAGGAGCTAACGAAAGAGCTACAATCCC
TTCAGAAGGAGAAGAGTGATCGGCTGAAACAAGTGATGGAACATCTTAACACTTTGCATT
CGTTATGCGAGGTGCTTGGTGTAGACTTCAAACAAACAGTATATGAGGTGCACCCTAGCC
TGGGTGAGACTGATGGATCAAAGAACCTAAGCAACAGTACAATTGAGAGTCTTGCATCTG
CTGTAAACAGATTGCGTGAATTGAAAGTCCAGAGGATGCAAAAGCTTCAAGATTTGGCAT
CTAGCATGCTTGAACTTTGGAATCTCATGGATACACCACTTGAAGAGCAGCAGATGTTCC
AGAATGTAACATGCAATATTGCTGCTTCAGAACATGAAATAACTGAGCCTAACACCCTCT
CTACCGACTTCCTCAGCTATGTGGAATCTGAAGTTTTAAGGCTTGAACAACTTAAAGCGA
GCAAGATGAAAGACCTTGTTCTGAAAAAGAAGACAGAACTGGAAGAGCATAGGAGACGTG
CTCATTTGATTGGCGAGGAGGGTTATGCAGCCGAATTTAGTGATGAGGCTATTGAGGCAG
GAGCTGTTGATCCTGCGCTGGTGCTGGAACAAATTGAGGCTCACATTGCCACAGTGAAAG
AGGAAGCTTTTAGCCGGAAGGATATCCTCGAGAAGGTTGAAAGGTGGCTGAATGCATGTG
AGGAGGAAGCTTGGCTGGAAGATTACAACAAAGATGACAATCGTTATAATGCTGGGAGAG
GGGCCCACTTGACACTCAAAAGGGCTGAGAAAGCTCGTATTTTGGTTAACAAGATCCCAG
GACTGGTAGATGTTTTGACCACAAAAATTGTAGCTTGGGAGACAGAAAGAGGAAAAGAGT
TCACATATGATGGTGTCCGCCTTCTGTCAATGCTTGAAGAGTACATGATTGTTCGCCAGG
AGAAAGAGCTAGAGAAGAAGAGGCAGAGGGACCAGAAGAAGATCCAGGATCAACTCAAAG
CTGAGCAGGAAGCGCTGTATGGATCAAAACCAAGTCCATCTAAGCCACAAAGCACGAAGA
AGGCACCTAGGCACTCCATGGGTGGTGCGAACCGAAGGCTGTCTCTTGGTGGACCCACAA
CGCATGCCCCCAAAACAGACATAATGCACTCCAAGACAGCTCGTGCTGCCAAGAAGGCTG
AAGATTTGGGCGCTTTATCTCCTAGTAGTAGAGGCTTGGACATTGCCGGTCTTCCCGTTA
AGAAGTTATGTTTCAACGCAAGCACTCTGCGAGAGGCAGAAACACCACGCAAGCCTTTTG
CCCAGATCATGCCAGGAAACAATGTCTCATCGATTCCTGCGCGGCCTATCTCCAATGACA
CAGAGGAAGAGAACAAAACCCCCAAGACATTTGCAGGGCTCAATCCAAAAACACCGGCGA
CAGTGACGGCTCCTATGCAGATGGCGGCGACACCAGCTGTGGCTAACAAGGTCGTAGCCA
CTCCTGAAACCCTTTTCCAGAAGGCAGAGTTACCAGCACTGCCAGCAGACATCGAGTACT
CGTTCGAAGAGAGGCGGCTCGCCCTTTACGTGGCCAGGCAAGTGGCTTAACTCGGTCATT
CACCTTCGCTCAGGTGTCCTAAGACCCAGTTATTACGTAGTTAACAGCTGAACTGACCCA
TTTCTCGTCAGAGGCCAATGTTACCTGTTGGTCGATACTCGATAGTAGTCGGCCTCGTTC
GTATTTTGCAGTACTATTCTGATTCAAAGCCATATTTGCTACAGCTAGTAAAGGGAGTAT
TTAGACTTGAGCTTGTGCTCCGTATCCTAAGTTGTATAGCTTCATCTGGTCGCATTGCAT
CGGCGATGACCTGTTATTGTTATTATTGTTTATTACTGTTATCCAAATATCTCGTCGCAT
GTTATGTTGTGATCTCAAATCTTTGGGATAATCTGGTTTCATCACCAGGAATCGTCATCC
TGGA