Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU87312
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:59109561:59116167:1 gene:SORBI_3003G252600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGAGGAGGCCGAGGCGTCCGTCCCCCCCGCCACGAACTACGTCTACGACGCCCTC
CCGGCGCTGCACTTCGCCTTCTCGCCGGAGGAGGAGGCCCTCGATGACGCCGCCGCGCCC
CGCTCGGCTGCCGCGGGGCAGGACGAGGATGACGCGACCGCGACCTACGCCGTCTTCCGC
AACGAGATAACAGCGGCTGGGGATGCGCTCGCGGACATCCCTGCCGCGGACTTCTTCTCG
CTCGACGTCTCCGCCGTCGAGGCCGAGGCCGAGCCCGAGCCGGCGTCCCCGCGGACCCCG
GCGCCCGCCGCTGCGGCGGCGACGCCCTCTGGCTCCCGTGCTTTGGAGGACCAGCCGGCG
CAGGGGTCCGAGCGCGCGTGGTTCAGAGGAGGGAGGCGGTTCAGGAGCCCCATGCTTCAG
CTACACAAGGAGATTCTTGACTTCTGTGATTTTATCTCACCTTCTACTGAAGAGCAATCT
TCACGAACAGCTGCTGTGCAAGATGTCTCTGATGTTGTCAAACATATATGGCCACAGTGC
AAGGTGGAAGTTTTTGGATCTTTCAGGACAGGTCTCTATCTACCAACAAGTGATATAGAT
GTTGTAGTATTCGAGTCCAGAGTTAAGACTCCTCAAGTTGGTCTATATGCTCTCGCAAAA
GCATTGTCTCAGAAAGGTGTTGCTAAAAAAATACAGGTAATAGCAAAGGCACGTGTGCCA
ATTGTGAAGTTTGTGGAAAGAAAGAGTGGAATAGCTTTTGACATCAGCTTTGATATGGAT
GGTGGGCCGCAGGCAGCAGACTTCATCAAGGATGCTGTGAAGAAGTTGCCTGCTTTAAGA
CCTTTATGTATGATTCTGAAAGTTTTTCTGCATCAGAGAGAGCTCAACGAGGTCTATACC
GGTGGAATTGGATCATATGCTCTTCTGACGATGTTGATCACACATCTACAGTTGGTCTGG
GGAGGAAAAGATATTCTTGGTTATCATCAGTCCAAGGAGCACAATTTGGGAATTCTTTTG
GTCAGGTTCTTTGATTTTTATGGACGCAAGTTGAACCATTGGGACGTTGGAATATCTTGC
AATTCTTCAAGGACCTTTTTCTTGAAGAGTGATAAAGACTTTATGAATCATGATCGGCCA
CATCTATTGGCGATTCAGGATCCCATGGTACCAGAAAATGATATCGGAAAGAATTCCTTT
AACTACTTTAAGGTGAAATCAGCATTTTCCAAGGCGTACTCTATGTTAACTGATGCGAAC
TTGCTTACAAGCTTGGGACATAATAGGAGCATTCTGGGTACCATTGTCAGACCAGATTCA
GTTCTCCTTGACCGGAAAGGCTGGAACAATGAAGATATGTTAGCGGAACCCTGGGAACCG
ATCACTCAACAGTTTGACAGTGAAAATGATGCAGCATATAATTGGCATGTGATAGATTTG
GATGAACCATTGCCCAGAAATATTCAATCCACATCCGAGGACACTAGTTCATCACCATCT
AAAAAACGGAAGTCCTCAAAATCAAAACAGAAATCGCGAAAGAAGTCGAAGGCTGGTGCC
TCAGGCAGTAGTGATGTTGCAAATGGGTTCAGAGAGGACAGATCATCCAAGCGGGAAGCG
GGAAGCAGCAAACGGAGGAAAGGACCAAAGGAGTATGACAGATTCACGAATACACACCCA
AAGTACACACATGTTAGTAAGTGGTAA

Peptide Sequence

PEP ID

OQU87312
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:59109561:59116167:1 gene:SORBI_3003G252600 transcript:OQU87312 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEEEAEASVPPATNYVYDALPALHFAFSPEEEALDDAAAPRSAAAGQDEDDATATYAVFR
NEITAAGDALADIPAADFFSLDVSAVEAEAEPEPASPRTPAPAAAAATPSGSRALEDQPA
QGSERAWFRGGRRFRSPMLQLHKEILDFCDFISPSTEEQSSRTAAVQDVSDVVKHIWPQC
KVEVFGSFRTGLYLPTSDIDVVVFESRVKTPQVGLYALAKALSQKGVAKKIQVIAKARVP
IVKFVERKSGIAFDISFDMDGGPQAADFIKDAVKKLPALRPLCMILKVFLHQRELNEVYT
GGIGSYALLTMLITHLQLVWGGKDILGYHQSKEHNLGILLVRFFDFYGRKLNHWDVGISC
NSSRTFFLKSDKDFMNHDRPHLLAIQDPMVPENDIGKNSFNYFKVKSAFSKAYSMLTDAN
LLTSLGHNRSILGTIVRPDSVLLDRKGWNNEDMLAEPWEPITQQFDSENDAAYNWHVIDL
DEPLPRNIQSTSEDTSSSPSKKRKSSKSKQKSRKKSKAGASGSSDVANGFREDRSSKREA
GSSKRRKGPKEYDRFTNTHPKYTHVSKW

Transcript Sequence

Transcript ID

OQU87312
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:59109561:59116167:1 gene:SORBI_3003G252600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTGGCCGCCACCGCCAACGCGGCGAAAGCGAAGGAGGGGGGGCAAGGGCAGACGAGCCGT
TTTCTACGCCGCGCCGCGGACGAGAGCAGCCGCCACAGCACCAGCAGCCCCAGCCGCCGC
CACGGAGATGGAGGAGGAGGCCGAGGCGTCCGTCCCCCCCGCCACGAACTACGTCTACGA
CGCCCTCCCGGCGCTGCACTTCGCCTTCTCGCCGGAGGAGGAGGCCCTCGATGACGCCGC
CGCGCCCCGCTCGGCTGCCGCGGGGCAGGACGAGGATGACGCGACCGCGACCTACGCCGT
CTTCCGCAACGAGATAACAGCGGCTGGGGATGCGCTCGCGGACATCCCTGCCGCGGACTT
CTTCTCGCTCGACGTCTCCGCCGTCGAGGCCGAGGCCGAGCCCGAGCCGGCGTCCCCGCG
GACCCCGGCGCCCGCCGCTGCGGCGGCGACGCCCTCTGGCTCCCGTGCTTTGGAGGACCA
GCCGGCGCAGGGGTCCGAGCGCGCGTGGTTCAGAGGAGGGAGGCGGTTCAGGAGCCCCAT
GCTTCAGCTACACAAGGAGATTCTTGACTTCTGTGATTTTATCTCACCTTCTACTGAAGA
GCAATCTTCACGAACAGCTGCTGTGCAAGATGTCTCTGATGTTGTCAAACATATATGGCC
ACAGTGCAAGGTGGAAGTTTTTGGATCTTTCAGGACAGGTCTCTATCTACCAACAAGTGA
TATAGATGTTGTAGTATTCGAGTCCAGAGTTAAGACTCCTCAAGTTGGTCTATATGCTCT
CGCAAAAGCATTGTCTCAGAAAGGTGTTGCTAAAAAAATACAGGTAATAGCAAAGGCACG
TGTGCCAATTGTGAAGTTTGTGGAAAGAAAGAGTGGAATAGCTTTTGACATCAGCTTTGA
TATGGATGGTGGGCCGCAGGCAGCAGACTTCATCAAGGATGCTGTGAAGAAGTTGCCTGC
TTTAAGACCTTTATGTATGATTCTGAAAGTTTTTCTGCATCAGAGAGAGCTCAACGAGGT
CTATACCGGTGGAATTGGATCATATGCTCTTCTGACGATGTTGATCACACATCTACAGTT
GGTCTGGGGAGGAAAAGATATTCTTGGTTATCATCAGTCCAAGGAGCACAATTTGGGAAT
TCTTTTGGTCAGGTTCTTTGATTTTTATGGACGCAAGTTGAACCATTGGGACGTTGGAAT
ATCTTGCAATTCTTCAAGGACCTTTTTCTTGAAGAGTGATAAAGACTTTATGAATCATGA
TCGGCCACATCTATTGGCGATTCAGGATCCCATGGTACCAGAAAATGATATCGGAAAGAA
TTCCTTTAACTACTTTAAGGTGAAATCAGCATTTTCCAAGGCGTACTCTATGTTAACTGA
TGCGAACTTGCTTACAAGCTTGGGACATAATAGGAGCATTCTGGGTACCATTGTCAGACC
AGATTCAGTTCTCCTTGACCGGAAAGGCTGGAACAATGAAGATATGTTAGCGGAACCCTG
GGAACCGATCACTCAACAGTTTGACAGTGAAAATGATGCAGCATATAATTGGCATGTGAT
AGATTTGGATGAACCATTGCCCAGAAATATTCAATCCACATCCGAGGACACTAGTTCATC
ACCATCTAAAAAACGGAAGTCCTCAAAATCAAAACAGAAATCGCGAAAGAAGTCGAAGGC
TGGTGCCTCAGGCAGTAGTGATGTTGCAAATGGGTTCAGAGAGGACAGATCATCCAAGCG
GGAAGCGGGAAGCAGCAAACGGAGGAAAGGACCAAAGGAGTATGACAGATTCACGAATAC
ACACCCAAAGTACACACATGTTAGTAAGTGGTAACTAACAGCGTTTATAGTATGGTCACA
AGGTCCAGCTCAATTTGACATTGAGAAGAGTATCATGGCACATTATGGCATGCAATGTGA
ATGACGAAAGTTATCAGCAGCTCCAGAAGCCACATTGTATGATTTGCTTGTTTGTCTGTT
TAGTTGCTATATACATTTTATGTACCAGAGATCAAACTAGATTAAATGAAGATTCGGTTA
TTTTATTTATGCTGCAGCAATTTTGGCGACTAGCTTGTATTCTTTTGTAATGGCATCATT
GGTGACGATGAGTTCTGTATGTTTGACATATTTGATTGATGGGCTGATTGCCTTAATCAC
TGAATAATATGTAGCTTTA