Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Sorghum bicolor

CDS Sequence

CDS ID	OQU87187
CDS Infomation	cds chromosome:Sorghum_bicolor_NCBIv3:3:56145619:56150218:-1 gene:SORBI_3003G225600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence	ATGGCTCCAGGCAGCGCGGACAGCGGAGGCATTTCCGTCGAGTGTCGAATCCCATTTTTC GTTTTTCCTTTAAGAAAAAAAGGGAACTCAGCACTAGGCAGCTCCTTGGGCCTGCTTGCC GTCTATATAAACTCCTACTCCTCCTCCTCCTACTCTCCAGGCAAGGTCATTAGCAAGCAG CTCATTCCTGCTAGCTTCCTTCGATTCTCCACTCGGCCGGCCGGGCCGGTGCTTTGTTGC TGGCTGCTGCTGCTGCCAGTGGTAGGCTATCATCTCATCATATCTCTCGCCGCGTCTACT CCACTTCGTTCCCCTGCCGATCACGTCCAGCTTGAAACCTCGCGAGCGAGAGGCCGGCCA TCGTGTGGAGCAACGCTAGCTGCTCAACTGGTGACCCTGATGAAACACCAAGGTGCCTTG AGTTTGGGTACGATGGAGTTCGTCAGCAGCAAGGACGTGCAGATGGCCGGGCTGAACACC GAGCTGTCGTCGAGAGAAGACGACGCGCTCCCGGCGCTTCTGATCAAGGTTCCGTCCCAG ACCATCGCGGGCTTCGACTGCGTCGTCGGCGCCGACGACGCCACCGTGTCCCTGGACGAG CTGGATGACAAGGTGGCTGAGGAGCTGCATCAGCAGGGCTCGGGAAGCACCAACACGGAC ATTGTCATCAGCATCCCTGCTGCTGCGCCGGCGGCGAGCGCGCCACCGCCACCGCCACGC GTCGTCGTCGCTCCTGCAGCGAGAGCCTACGACGACGACGCGCACGTCGTCCCGTACTCC GTCTCGCTCAGCATGCCGGCGTCGCCGTCGGGGTTCCACCTGTCGCAGTTCATGTGCGCG GACCGTCGCGCGCGCGTGGCGCCGCCCGACGACGACGCCCACCGCCACCCGGTGGCCGTG GAGGGGCAGCAGATGGTGGAGGGGCCGCACTCGCCGCGGCTGATCAAGCAGACGCGGTTC CACTCGCAGCCCATCCTGAACCTGCACCCGTCGTCGTCCAAGAACGTCGTCGCCGACGGC AGCAGCACGCGCGACAAGCGGTTCGACCCGTTCAAGACCTTCTCCGGCCGCCTCGAGCGC CAGCTGTCCAACCTGCGCGGCCGCCCGCAGGAGCCCATCGACGGCGTATCCCCGGACTCG AAGATCTCCGAGGAGGAGACCGACCAGGTCCCCGCCGCCGACCGCTACTTCGACGCCTTG GAAGGCCCCGAACTCGACACGCTCAGGGCCACGGAGGTGCCGGTGCTGCCGAAAGACGAG AAGTGGCCATTCCTGCTGCGGTTCCCGATCAGCGCGTTCGGTATGTGCCTGGGCGTGAGC AGCCAGGCCATCCTGTGGAAGACGCTGGCGTCGGCGCCGCCGACGGCGTTCCTGCACGTG AGCCCCGTGGTGAGCCACGCGCTGTGGTACGTGGCGCTGGCGCTGATGCTGCTGGTGTCC GTCATCTACCTGCTCAAGGTGGTGTTCTACTTCGAGGCGGTGCGGCGCGAGTTCTACCAC CCGATCCGCGCCAACTTCTTCTTCGCGCCGTGGATCGCGTGCCTGTTCCTGGTGCTGGGC GCGCCGCGCCTGGTGGCGGAGATGCACCACGGCGTGTGGTACGCGGTCATGGCGCCCATC TTCTGCCTGGAGCTCAAGATCTACGGGCAGTGGATGTCCGGCGGCCAGCGGCGGCTGTCC AAGGTGGCCAACCCGTCCAACCACCTCTCCATCGTCGGCAACTTCGTCGGCGCGCTGCTG GGAGCCAAGATGGGGCTCCGCGAGGGCCCCATCTTCTTCTTCGCCGTCGGGCTGGCGCAC TACATGGTGCTCTTCGTGACGCTCTACCAGCGGCTGCCCACCAACGTGACGCTCCCCAAG GAGCTCCACCCCGTGTTCTTCCTCTTCGTCGCCGCCCCCAGCGTGGCGTCCATGGCCTGG GCCAAGATCAACGGCCAGTTCGACGCCGGCGCACGGATCGCCTACTTCATCGCGCTCTTC CTCTACATGTCACTGGCGGTGCGCATCAACTTCTTCCGGGGTTTCCGCTTCTCGCTGGCG TGGTGGGCGTACACGTTCCCGATGACCGGCGCGTCCGTCGCGACCATCACGTACGCGACG GAGGTGACCAACGTGCTGACACGGGCGCTCTCCATCGGGCTGTCGGGGATCTCCACCGTC ACCGTCGCGGGGCTGCTGGTGACCACGGTGTTCCACGCCTTCGTGCTCAGAGACCTCTTC CCCAACGACGTGTCCATCGCCATCACGCGGAAGAAGCCCAAGTTCAGCAAGATCCTCGCG CACTTCCGCTCGTCCAGCTCCGACATGAAGGAGCTCGTCTTCTCCCTCTCCTCCAACTCC AAGACGGCGGCGCAGTCCGACTCCGGCGACACCGACAGCGACCCGTCCGTGACCGCCAAA TCACGAGCCGAGCCGTGA

Peptide Sequence

PEP ID	OQU87187
PEP Infomation	pep chromosome:Sorghum_bicolor_NCBIv3:3:56145619:56150218:-1 gene:SORBI_3003G225600 transcript:OQU87187 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence	MAPGSADSGGISVECRIPFFVFPLRKKGNSALGSSLGLLAVYINSYSSSSYSPGKVISKQ LIPASFLRFSTRPAGPVLCCWLLLLPVVGYHLIISLAASTPLRSPADHVQLETSRARGRP SCGATLAAQLVTLMKHQGALSLGTMEFVSSKDVQMAGLNTELSSREDDALPALLIKVPSQ TIAGFDCVVGADDATVSLDELDDKVAEELHQQGSGSTNTDIVISIPAAAPAASAPPPPPR VVVAPAARAYDDDAHVVPYSVSLSMPASPSGFHLSQFMCADRRARVAPPDDDAHRHPVAV EGQQMVEGPHSPRLIKQTRFHSQPILNLHPSSSKNVVADGSSTRDKRFDPFKTFSGRLER QLSNLRGRPQEPIDGVSPDSKISEEETDQVPAADRYFDALEGPELDTLRATEVPVLPKDE KWPFLLRFPISAFGMCLGVSSQAILWKTLASAPPTAFLHVSPVVSHALWYVALALMLLVS VIYLLKVVFYFEAVRREFYHPIRANFFFAPWIACLFLVLGAPRLVAEMHHGVWYAVMAPI FCLELKIYGQWMSGGQRRLSKVANPSNHLSIVGNFVGALLGAKMGLREGPIFFFAVGLAH YMVLFVTLYQRLPTNVTLPKELHPVFFLFVAAPSVASMAWAKINGQFDAGARIAYFIALF LYMSLAVRINFFRGFRFSLAWWAYTFPMTGASVATITYATEVTNVLTRALSIGLSGISTV TVAGLLVTTVFHAFVLRDLFPNDVSIAITRKKPKFSKILAHFRSSSSDMKELVFSLSSNS KTAAQSDSGDTDSDPSVTAKSRAEP

Transcript Sequence

Transcript ID	OQU87187
Transcript Infomation	cdna chromosome:Sorghum_bicolor_NCBIv3:3:56145619:56150218:-1 gene:SORBI_3003G225600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence	ATGGCTCCAGGCAGCGCGGACAGCGGAGGCATTTCCGTCGAGTGTCGAATCCCATTTTTC GTTTTTCCTTTAAGAAAAAAAGGGAACTCAGCACTAGGCAGCTCCTTGGGCCTGCTTGCC GTCTATATAAACTCCTACTCCTCCTCCTCCTACTCTCCAGGCAAGGTCATTAGCAAGCAG CTCATTCCTGCTAGCTTCCTTCGATTCTCCACTCGGCCGGCCGGGCCGGTGCTTTGTTGC TGGCTGCTGCTGCTGCCAGTGGTAGGCTATCATCTCATCATATCTCTCGCCGCGTCTACT CCACTTCGTTCCCCTGCCGATCACGTCCAGCTTGAAACCTCGCGAGCGAGAGGCCGGCCA TCGTGTGGAGCAACGCTAGCTGCTCAACTGGTGACCCTGATGAAACACCAAGGTGCCTTG AGTTTGGGTACGATGGAGTTCGTCAGCAGCAAGGACGTGCAGATGGCCGGGCTGAACACC GAGCTGTCGTCGAGAGAAGACGACGCGCTCCCGGCGCTTCTGATCAAGGTTCCGTCCCAG ACCATCGCGGGCTTCGACTGCGTCGTCGGCGCCGACGACGCCACCGTGTCCCTGGACGAG CTGGATGACAAGGTGGCTGAGGAGCTGCATCAGCAGGGCTCGGGAAGCACCAACACGGAC ATTGTCATCAGCATCCCTGCTGCTGCGCCGGCGGCGAGCGCGCCACCGCCACCGCCACGC GTCGTCGTCGCTCCTGCAGCGAGAGCCTACGACGACGACGCGCACGTCGTCCCGTACTCC GTCTCGCTCAGCATGCCGGCGTCGCCGTCGGGGTTCCACCTGTCGCAGTTCATGTGCGCG GACCGTCGCGCGCGCGTGGCGCCGCCCGACGACGACGCCCACCGCCACCCGGTGGCCGTG GAGGGGCAGCAGATGGTGGAGGGGCCGCACTCGCCGCGGCTGATCAAGCAGACGCGGTTC CACTCGCAGCCCATCCTGAACCTGCACCCGTCGTCGTCCAAGAACGTCGTCGCCGACGGC AGCAGCACGCGCGACAAGCGGTTCGACCCGTTCAAGACCTTCTCCGGCCGCCTCGAGCGC CAGCTGTCCAACCTGCGCGGCCGCCCGCAGGAGCCCATCGACGGCGTATCCCCGGACTCG AAGATCTCCGAGGAGGAGACCGACCAGGTCCCCGCCGCCGACCGCTACTTCGACGCCTTG GAAGGCCCCGAACTCGACACGCTCAGGGCCACGGAGGTGCCGGTGCTGCCGAAAGACGAG AAGTGGCCATTCCTGCTGCGGTTCCCGATCAGCGCGTTCGGTATGTGCCTGGGCGTGAGC AGCCAGGCCATCCTGTGGAAGACGCTGGCGTCGGCGCCGCCGACGGCGTTCCTGCACGTG AGCCCCGTGGTGAGCCACGCGCTGTGGTACGTGGCGCTGGCGCTGATGCTGCTGGTGTCC GTCATCTACCTGCTCAAGGTGGTGTTCTACTTCGAGGCGGTGCGGCGCGAGTTCTACCAC CCGATCCGCGCCAACTTCTTCTTCGCGCCGTGGATCGCGTGCCTGTTCCTGGTGCTGGGC GCGCCGCGCCTGGTGGCGGAGATGCACCACGGCGTGTGGTACGCGGTCATGGCGCCCATC TTCTGCCTGGAGCTCAAGATCTACGGGCAGTGGATGTCCGGCGGCCAGCGGCGGCTGTCC AAGGTGGCCAACCCGTCCAACCACCTCTCCATCGTCGGCAACTTCGTCGGCGCGCTGCTG GGAGCCAAGATGGGGCTCCGCGAGGGCCCCATCTTCTTCTTCGCCGTCGGGCTGGCGCAC TACATGGTGCTCTTCGTGACGCTCTACCAGCGGCTGCCCACCAACGTGACGCTCCCCAAG GAGCTCCACCCCGTGTTCTTCCTCTTCGTCGCCGCCCCCAGCGTGGCGTCCATGGCCTGG GCCAAGATCAACGGCCAGTTCGACGCCGGCGCACGGATCGCCTACTTCATCGCGCTCTTC CTCTACATGTCACTGGCGGTGCGCATCAACTTCTTCCGGGGTTTCCGCTTCTCGCTGGCG TGGTGGGCGTACACGTTCCCGATGACCGGCGCGTCCGTCGCGACCATCACGTACGCGACG GAGGTGACCAACGTGCTGACACGGGCGCTCTCCATCGGGCTGTCGGGGATCTCCACCGTC ACCGTCGCGGGGCTGCTGGTGACCACGGTGTTCCACGCCTTCGTGCTCAGAGACCTCTTC CCCAACGACGTGTCCATCGCCATCACGCGGAAGAAGCCCAAGTTCAGCAAGATCCTCGCG CACTTCCGCTCGTCCAGCTCCGACATGAAGGAGCTCGTCTTCTCCCTCTCCTCCAACTCC AAGACGGCGGCGCAGTCCGACTCCGGCGACACCGACAGCGACCCGTCCGTGACCGCCAAA TCACGAGCCGAGCCGTGA