Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86798
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:15620729:15625996:-1 gene:SORBI_3003G148800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCTGGGCTCGCCTTGCCTCCCGCTCCCGTCTGCGCCCCGCGGCCTCCGCCTCCGCC
TCCGCCGCCGTCGGCCGACCGCCAAACGCCTCACCGTCGGTTCCGCCTCCCACACCGCCC
ACTGTGCCTGCGGCCACCTCCGCGCCACCGCTCCGGCATCTCCTCCTCCTTCCCCGGCAC
CGGTTTGCTGCCGCCGCGTCCTCGCGGTGGCCCCAGGGTCACGGTAGGAGATGCTTCGCG
AGCGAGGCCTCCGCGGCGCAGGCGCCGCCGGGGGAGGCCTCTGAGCTGGTGGAGGTGCCA
CTGGCGCAGACTGGGGAAGGCATCGCCGAGTGCGAGCTGCTGCGCTGGTTCGTCGCCGAG
GGTGACCAAGTAGATGAATTCCAGCCCCTTTGTGAAGTACAGAGTGACAAAGCAACTATC
GAGATAACAAGTCGTTTCAAGGGAAAAGTACATCAGATTAACTTTGGCCCTGGTGACATA
GTCAAGGTTGGTGAAACTTTACTGAAAATGATTGTGGGTGACAGCCAAATTGTTTCCCCA
GATAATATAGTTCCATCTGCTGATAAGTCCAATGGAGTAGAGTCTGCAGTTTCCTTAAGT
GAAGGCAATGTTCCTAGTGGAACTCTCTCTACACCAGCTGTTAGGCATCTAGCAAAGCAG
TACGGGATCAACATAAATGAAATCGTTGGAACAGGGAAAGATGGTAGGGTTTTGAAAGAA
GATGTGTTGAATTATGCTGTCAGCAAGGGTGTTTGCAAAGAACAATCGTCAGCTTTGGAA
GGGAACATTGATCAAGTTGAGTTACTGGAGGAAGGGAAATCATTACTCGATGAGCACGTC
TATGAAGATAAGAAAATCCTTCTCAGGGGATACCAGAGATCAATGGTCAAATCAATGAGC
CTGGCTGCAAAAGTTCCACATTTTCATTATCTGGAGGAAATAAACTGTGATTCTCTTGTA
CAACTAAAGACCACATTTCAAAATGAGAACAAGGATCATACTATCAAGCACACATTCCTT
CCGTTCCTCATAAAGTCACTTTCTATGGCACTGAGTAAATACCCTATATTGAACAGCTCT
TTCATCGAGGAAACTAGTGAAGTTGTGTTCAAAGGGTCCCACAATATTGGGGTCGCAATG
GCTACAGCACATGGATTAGTCGTGCCAAACATCAAGAAAGTGCAGTCCCTATCAATATTG
GAGATCACGAAGGAATTGGCGCGATTGCATGAGATGGCATCGCACAACAGGCTAAGCGCT
GCAGATATTGAAGGTGGCACTATAACACTTAGCAACATAGGTGCCATTGGTGGCAAGTTT
GGCTCTCCCCTTCTGAACCTACCTGAAGTTGCCATCATTGCCCTTGGGCGGATTCAAAAA
CTTCCTCGCTTTGATGATGACGAAAACGTTTACCCTTCATCCACAATCAATGTTACTATT
GGAGCCGATCACCGAGTTGTTGATGGGGCCACGGTTGCAAGATTCTGTAACGAGTGGAAG
AGCCTCGTGGAGAAGCCAGAGCTACTCTTGCTGCATATGCGATGA

Peptide Sequence

PEP ID

OQU86798
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:15620729:15625996:-1 gene:SORBI_3003G148800 transcript:OQU86798 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAWARLASRSRLRPAASASASAAVGRPPNASPSVPPPTPPTVPAATSAPPLRHLLLLPRH
RFAAAASSRWPQGHGRRCFASEASAAQAPPGEASELVEVPLAQTGEGIAECELLRWFVAE
GDQVDEFQPLCEVQSDKATIEITSRFKGKVHQINFGPGDIVKVGETLLKMIVGDSQIVSP
DNIVPSADKSNGVESAVSLSEGNVPSGTLSTPAVRHLAKQYGININEIVGTGKDGRVLKE
DVLNYAVSKGVCKEQSSALEGNIDQVELLEEGKSLLDEHVYEDKKILLRGYQRSMVKSMS
LAAKVPHFHYLEEINCDSLVQLKTTFQNENKDHTIKHTFLPFLIKSLSMALSKYPILNSS
FIEETSEVVFKGSHNIGVAMATAHGLVVPNIKKVQSLSILEITKELARLHEMASHNRLSA
ADIEGGTITLSNIGAIGGKFGSPLLNLPEVAIIALGRIQKLPRFDDDENVYPSSTINVTI
GADHRVVDGATVARFCNEWKSLVEKPELLLLHMR

Transcript Sequence

Transcript ID

OQU86798
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:15620729:15625996:-1 gene:SORBI_3003G148800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGCTTTCCACGAAGCATGGGCAGGACGGACAGGAGCAGCAGCTCTGCAGCCGATGATAAG
CTAGGCAGAGTCCCCACTCCACTCTGCTCCTTGTCAGCTGCTCGCACTTGTTGCAGTGTC
CCGCTCCCGCACTCCTCTTCCTCCCTCCCTCCCTCCATCCTCTTCTCGTCGTACACAGCG
CGCGCACGCAGCTGCCACCGGCCACCGCGCCAACCAATCCAAAACTCCGCCGCGCGCAGA
TCAAGACTGCCACCAGCCACCAGCACTCCAGCAGCGCTTCAGCGGGAGACGTGACGACTG
ACGAGACGAAGCTTGCGCCTCTCCTCCCCCCCACGCCGCCCACATGGCCTGGGCTCGCCT
TGCCTCCCGCTCCCGTCTGCGCCCCGCGGCCTCCGCCTCCGCCTCCGCCGCCGTCGGCCG
ACCGCCAAACGCCTCACCGTCGGTTCCGCCTCCCACACCGCCCACTGTGCCTGCGGCCAC
CTCCGCGCCACCGCTCCGGCATCTCCTCCTCCTTCCCCGGCACCGGTTTGCTGCCGCCGC
GTCCTCGCGGTGGCCCCAGGGTCACGGTAGGAGATGCTTCGCGAGCGAGGCCTCCGCGGC
GCAGGCGCCGCCGGGGGAGGCCTCTGAGCTGGTGGAGGTGCCACTGGCGCAGACTGGGGA
AGGCATCGCCGAGTGCGAGCTGCTGCGCTGGTTCGTCGCCGAGGGTGACCAAGTAGATGA
ATTCCAGCCCCTTTGTGAAGTACAGAGTGACAAAGCAACTATCGAGATAACAAGTCGTTT
CAAGGGAAAAGTACATCAGATTAACTTTGGCCCTGGTGACATAGTCAAGGTTGGTGAAAC
TTTACTGAAAATGATTGTGGGTGACAGCCAAATTGTTTCCCCAGATAATATAGTTCCATC
TGCTGATAAGTCCAATGGAGTAGAGTCTGCAGTTTCCTTAAGTGAAGGCAATGTTCCTAG
TGGAACTCTCTCTACACCAGCTGTTAGGCATCTAGCAAAGCAGTACGGGATCAACATAAA
TGAAATCGTTGGAACAGGGAAAGATGGTAGGGTTTTGAAAGAAGATGTGTTGAATTATGC
TGTCAGCAAGGGTGTTTGCAAAGAACAATCGTCAGCTTTGGAAGGGAACATTGATCAAGT
TGAGTTACTGGAGGAAGGGAAATCATTACTCGATGAGCACGTCTATGAAGATAAGAAAAT
CCTTCTCAGGGGATACCAGAGATCAATGGTCAAATCAATGAGCCTGGCTGCAAAAGTTCC
ACATTTTCATTATCTGGAGGAAATAAACTGTGATTCTCTTGTACAACTAAAGACCACATT
TCAAAATGAGAACAAGGATCATACTATCAAGCACACATTCCTTCCGTTCCTCATAAAGTC
ACTTTCTATGGCACTGAGTAAATACCCTATATTGAACAGCTCTTTCATCGAGGAAACTAG
TGAAGTTGTGTTCAAAGGGTCCCACAATATTGGGGTCGCAATGGCTACAGCACATGGATT
AGTCGTGCCAAACATCAAGAAAGTGCAGTCCCTATCAATATTGGAGATCACGAAGGAATT
GGCGCGATTGCATGAGATGGCATCGCACAACAGGCTAAGCGCTGCAGATATTGAAGGTGG
CACTATAACACTTAGCAACATAGGTGCCATTGGTGGCAAGTTTGGCTCTCCCCTTCTGAA
CCTACCTGAAGTTGCCATCATTGCCCTTGGGCGGATTCAAAAACTTCCTCGCTTTGATGA
TGACGAAAACGTTTACCCTTCATCCACAATCAATGTTACTATTGGAGCCGATCACCGAGT
TGTTGATGGGGCCACGGTTGCAAGATTCTGTAACGAGTGGAAGAGCCTCGTGGAGAAGCC
AGAGCTACTCTTGCTGCATATGCGATGATCCAGTAAGATACTAGTACCTACTACGAGAGA
TCGCCCAAACCTTTTTAAGATGATCTGAAATGGAGGCATTCCGGTATCACAGTGAAATCC
ATGTATTCAAATAAATGATCAACGTGGCTTCTCTGCCTGCAAACAGTGGAAATAAAGCGG
AGAGTTATTCTCGAAAGTCCTAACTAATAAGCTTGCCTCGCCTCAGAACGTTATGTTTTT
CTTTGCTGACATCCATAGATATTCTTGCTCCGCCTATCAATCTAAGATGTATTTTTATTT
AAAGATTGGAAGTTTTGAACAACAATTAGTGAAACAAATCCGTT