Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86794
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:15348427:15355092:1 gene:SORBI_3003G147600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACCCCCGGTCCCCCGCTCCCTGGCTGTCTGGCAAAACCGGGCCCATTCCTGTTCAAA
TTCCGTGATTGTCAGGTGGGGCCCACCAAAATAGCGACCCGATCTCGATTCCTCGTCCCC
GGGCCCCCACATCCAACGGTCATCTCCCCTCCGCTCCACGCCGCCACCGCTCTCCTCCTC
GCGGCGCAAACCGCACCTCCACAGGAAACCCCAAGCGGCGGCCGTCCCTTCCGCGGCTCC
GCCCGCCTCCCTCTGCTCTCCGATTCTAGCGGATTCCATGGCCAGAGGCGACGCCGGCGC
GCTGGTGCCGGCACCGGCGCTGGCGCCCGCGCCCACTCCGGCCCAGGTCTACCTGCCCGC
GTGGCGCCGCACGTACGACCGCCTCGTGAAGATGCTGCGCCAGGCGTACGCGCAGGCCGA
GGAGCTCTCCGTCGAGCGCGAGCACCTCATCACCGAGCTCCAGTTCCTGCAGAGCGGCCT
CCGCGAGCGCGAGGAGATCTCCCAGGCCCGCCTCCAGCAGAACTTGCTGAGAATGATTTG
GAGGACTTCAAAAGTTGTATTTTGAATTTGACTGCTGAAAATACTGAGCTAAAGGAAAAA
CTGAAGAAGTTTGAAAGTCAGATGGAGATTTGTACCGACAATTCAGATCACCAGAAAAGT
GGGAAAGATATTAGGGAAGAGGTAAGGAAACTAAAGAAAGCTTACAAGATCCTGAGGTCA
GAGAAGGACAAGGAAATTTCAGCATTACAAGCGAAAAAGAATTTTGTGTGTAACCAGCTT
AAGACAATGGAAGAAGATTACAGAGGGGCCATTAAGAGCAAGAACATAGAGGTGAAGCAA
GCACAAAAGCTTCTGCAGAATGTAGATGGGCTGCAAGTGGCATCCCAAAAGAAGGATGAT
GAAATCATTAGACTACAAGTTGAGGTGACAAATGCCAAAGAGAGGATGTCAATTCTTGAG
GATGAGCTGCAAAAAATGCGCTCCTTGGTCAAGGATAAAGGTCTTCAAACTGATAAAAAT
GAAGATGATCAATCAGACACTAGTAAGATGTCGAAGAAGGATATTCATAAGGCAAACAGA
AAATCTAAGTCTACAAGAACTTGCCAGGTCACACCTGATATATCAAGAATTTCCCAGGTC
ACACCTGATAGGCAAGAAGTGAAGACTACAAGAACATGTGCATCTGAGACTAATCAGAAG
CGCAAGCGTAGCTGCTTCAAGTCCTCCCTGTCGTGTGTAAGTGAGATGTCGAAGAAGGAT
ATTATTAAGGCAAACAGAAAATCTAAGTCTACAAAAACTTCCCAGGTCACACCTGATATA
TCAAGAACTTCCCAGGTTACACCTGATAGCCAACAAGTGAAGACTACAAGAACATGTGCG
TCTGAGACTAATCAGAAGCGCAAGCGTAGCTCCTTTAGGTCCCCCCTGTCGTGTGTAAGT
GAGATGTCGAAGAAGGATATTATTGAGGCAAACAGAAAATCTAAGTCTACAAAAACTTCC
CAGGTCACACCTGATAGGCGAGAAGTGAAGACTACAAGAACACGTGCATCTGAGAGACTG
AGACTAATCAGAAGCGCAAGCATAGCTCCTTCAAGTCCTCCCTGTCGTGTGTAA

Peptide Sequence

PEP ID

OQU86794
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:15348427:15355092:1 gene:SORBI_3003G147600 transcript:OQU86794 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTPGPPLPGCLAKPGPFLFKFRDCQVGPTKIATRSRFLVPGPPHPTVISPPLHAATALLL
AAQTAPPQETPSGGRPFRGSARLPLLSDSSGFHGQRRRRRAGAGTGAGARAHSGPGLPAR
VAPHVRPPREDAAPGVRAGRGALRRARAPHHRAPVPAERPPRARGDLPGPPPAELAENDL
EDFKSCILNLTAENTELKEKLKKFESQMEICTDNSDHQKSGKDIREEVRKLKKAYKILRS
EKDKEISALQAKKNFVCNQLKTMEEDYRGAIKSKNIEVKQAQKLLQNVDGLQVASQKKDD
EIIRLQVEVTNAKERMSILEDELQKMRSLVKDKGLQTDKNEDDQSDTSKMSKKDIHKANR
KSKSTRTCQVTPDISRISQVTPDRQEVKTTRTCASETNQKRKRSCFKSSLSCVSEMSKKD
IIKANRKSKSTKTSQVTPDISRTSQVTPDSQQVKTTRTCASETNQKRKRSSFRSPLSCVS
EMSKKDIIEANRKSKSTKTSQVTPDRREVKTTRTRASERLRLIRSASIAPSSPPCRV

Transcript Sequence

Transcript ID

OQU86794
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:15348427:15355092:1 gene:SORBI_3003G147600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAAGATTCGATGTGATGTGGAATCTTGAAAAGGTTTTGAATTTTGGGGTGATTTAAACAA
GCCTAAGAAATGTTTTGTGTTTTCAGAAAGCAGTGTGGAAAATTTTGGAGTAGCTGCTAG
TTTCTGTCAAGAACTTGGCGTAGCTAAATTTTTTCAAAAAAAGAGCTAAGAAGTAAAAAA
TTAGGTCATCCAAATCCAAGAAGCCTATGACCCCCGGTCCCCCGCTCCCTGGCTGTCTGG
CAAAACCGGGCCCATTCCTGTTCAAATTCCGTGATTGTCAGGTGGGGCCCACCAAAATAG
CGACCCGATCTCGATTCCTCGTCCCCGGGCCCCCACATCCAACGGTCATCTCCCCTCCGC
TCCACGCCGCCACCGCTCTCCTCCTCGCGGCGCAAACCGCACCTCCACAGGAAACCCCAA
GCGGCGGCCGTCCCTTCCGCGGCTCCGCCCGCCTCCCTCTGCTCTCCGATTCTAGCGGAT
TCCATGGCCAGAGGCGACGCCGGCGCGCTGGTGCCGGCACCGGCGCTGGCGCCCGCGCCC
ACTCCGGCCCAGGTCTACCTGCCCGCGTGGCGCCGCACGTACGACCGCCTCGTGAAGATG
CTGCGCCAGGCGTACGCGCAGGCCGAGGAGCTCTCCGTCGAGCGCGAGCACCTCATCACC
GAGCTCCAGTTCCTGCAGAGCGGCCTCCGCGAGCGCGAGGAGATCTCCCAGGCCCGCCTC
CAGCAGAACTTGCTGAGAATGATTTGGAGGACTTCAAAAGTTGTATTTTGAATTTGACTG
CTGAAAATACTGAGCTAAAGGAAAAACTGAAGAAGTTTGAAAGTCAGATGGAGATTTGTA
CCGACAATTCAGATCACCAGAAAAGTGGGAAAGATATTAGGGAAGAGGTAAGGAAACTAA
AGAAAGCTTACAAGATCCTGAGGTCAGAGAAGGACAAGGAAATTTCAGCATTACAAGCGA
AAAAGAATTTTGTGTGTAACCAGCTTAAGACAATGGAAGAAGATTACAGAGGGGCCATTA
AGAGCAAGAACATAGAGGTGAAGCAAGCACAAAAGCTTCTGCAGAATGTAGATGGGCTGC
AAGTGGCATCCCAAAAGAAGGATGATGAAATCATTAGACTACAAGTTGAGGTGACAAATG
CCAAAGAGAGGATGTCAATTCTTGAGGATGAGCTGCAAAAAATGCGCTCCTTGGTCAAGG
ATAAAGGTCTTCAAACTGATAAAAATGAAGATGATCAATCAGACACTAGTAAGATGTCGA
AGAAGGATATTCATAAGGCAAACAGAAAATCTAAGTCTACAAGAACTTGCCAGGTCACAC
CTGATATATCAAGAATTTCCCAGGTCACACCTGATAGGCAAGAAGTGAAGACTACAAGAA
CATGTGCATCTGAGACTAATCAGAAGCGCAAGCGTAGCTGCTTCAAGTCCTCCCTGTCGT
GTGTAAGTGAGATGTCGAAGAAGGATATTATTAAGGCAAACAGAAAATCTAAGTCTACAA
AAACTTCCCAGGTCACACCTGATATATCAAGAACTTCCCAGGTTACACCTGATAGCCAAC
AAGTGAAGACTACAAGAACATGTGCGTCTGAGACTAATCAGAAGCGCAAGCGTAGCTCCT
TTAGGTCCCCCCTGTCGTGTGTAAGTGAGATGTCGAAGAAGGATATTATTGAGGCAAACA
GAAAATCTAAGTCTACAAAAACTTCCCAGGTCACACCTGATAGGCGAGAAGTGAAGACTA
CAAGAACACGTGCATCTGAGAGACTGAGACTAATCAGAAGCGCAAGCATAGCTCCTTCAA
GTCCTCCCTGTCGTGTGTAAGTAAGATGTCGAAGAAGGATATTAATAAGGCAAACAGAAA
ATCTGAGTCTACAAGAACTTCCTAGGTCACACCTGAGGTGGACACTGTCTGGTTGCTTGG
GTAAAGGTTTGCAGGCCAACTGAACTTGGTGGACTAGGGATCTCAGACTTAAAAACTATT
GGCTGGGCATTAAGAATGCGATGGTTATGTCTGCAAAAAACAGAGCCTTTCTTTGCGGTG
GCTGTTAGTTCGGAAGTCGGAGATGGTGAGCATACCCTTTTCTGGACTGATAGATGGCTG
CATGGTCGGTGTATAGAAGAGCTGGCTCCTTGTTTATTTGCTGCCATCCCCAAAAGACGG
ACTAAGCAACGTATGGTCAAGGAAGCACTCACTAACCGTGCTTGGATTGCAGATATAAAG
GGGGCTCTAACTGTTGGTGTAATTATGGATTATTTACATCTATGGGATTTAGTTTCAGCT
ACTGTTTTACAGCCAGAAAGTGAGGACAAACATATTTGGAGGCTTTCCTCTAATGGTCAA
TACTCAGCCAAGTCGGCATATGAGGGATTTTTCTTGGGAGCTACCCCATTTACACCATGG
GAACTGATTTGGAAGACCTGGGCACCACCGAAATGTCGGTTCTTCATGTGGTTAGTAGCT
CACAAGAAATGTTGGACAGCTGATCGCCTTGCACACCGGGGGCTGCCCTGCCCAGGTTGA
TGTCCACTGTGTGATCAAGAGGAGGAAACTATCAATCATCTTTGTGTTTTTGCTAGGGAG
TTCTGGTTCCATCTGCTTAGACAGGTTGGTATACAGGCCTTATCTCCACAGCCTGTTGAA
AACTCCTTCCTCGACTGGTGGGACAGAGCTAATGGTGCTATTCCTGAGCTTCTAAGGCAA
GGGGTCAACTCCCTATTCATGCTAGGGGCTTGGATTCTTTGGAACCATAGCAATCGGTGT
GTTTTTGATGGAGCGGCTCCAAGTATTGCTGGGGCCTTAGTCATGGCTGGTGAGGAACGC
CGGCTGTGGACCTTAGCTGGGCTCGAGGACTCTCCCTTTTATCTGTTCGCCTCCGAGGTG
TCTAGTTGCTTAGGTCTTTTCGGGTCGCGTTGTTAGCCAGCTTAGGAGAGCAAAATGTCT
GTTGTGTTTTGCTGTTTGTGGGTGTGCGTTGAGTTGGGTTGAGTTTTGTAAGTGTGTTGG
GCTCTTGCACCCTTTTTCTTCTTAATATATTATGCGTAGATCTCCTGCGTTTTCCGAAAA
AAAATATATCAAGAACTTCCCAGGTCACACCTGATAGGCAAGAAGTGAAGACTACAAGAT
CACGTGCGTCTGACTAATCAGAACGCAAGCATAGCTCCTTCAAGTCCTTCCTGTCGTGTG
TAAGTATTCCGTTTACTGGTATATAGTAGGCTCATATTGCACCGCCAACACATGATCTGT
GACTATCAATTAGCAACACTTTTCATTTGTTATTCATGTATGATCAATGGCAATGTTGTT
TTATTAAGTGAACTTGATCTGTTTTTCTAATGTGCATAAACAAATAGACTAATTGTTTAG
CCGACCTAGAGTTCATCTAAAAGACTCTGGTAGGCTGTATGTATGAGTTGTGTCTTGCTG
TAAATATGGATTGGTAATAGTTTGACAAGTTAGGTTTGGTTTGTATGATTTCAAAAATAT
GTCTCCTTCAGAAGCGTTCTTTCTGGAAGTGCTAAAATGAACTGCAGTGTGGAACTTTGG
ATTAATCAACCTGTCAACCTGTTCTACAATTATAGCCTGCAAATAGTAAATATGTACCAG
TGTGTGCTCTTAAGTCTTAACTTAATCTGTACGACGTGTGATCTTGTTTGGGTGCATAGA
CAATGACGTGTGATCCTCTAATATTTTTTTATCCATAAATTTTATGCCTAATCCTCGGTG
TTCTGCATGAATTGCATTCAATCTAAATGTGCACAGATAACAAACTGATGGAAAATATGT
GTATTGTTCTCTTAGTTTTGATCCTTGTTGCAATGTCCTAATTCTTGGTGGTCCGCATGA
GTTGCAGCCTGCTGTATATATGGACAAACAATAAATGTGATGGAATTTAGGTGAGCATCA
TGTGAGAGTCGTAGATGCTCTTAAAGGACCATTGCACATACACTAGAAGGATATGATAGA
ACATGAGGGTTGGGTTTCACCACCTAAAATGAGCAAGTGGCTGTTTGGTTGATTATGCTC
ATGGAAAATTATGCTCATGGAAAATATTATAATAACAAAAGGCAGATATACTGATACTAT
TTCCCTGAAATTTTCAATGCCCCATTTCTTTGTTCACCTGGATCAAGCACATGTTGCTGT
AAACTTGGACAGAAATAAGTTGATCGAAACTAGGTAGTGTTCTCTTAATTCTGATTGGTG
ATAAAGGATCTGCAAAATAGTTTGTTGGTAGTTTTCTGATTTGTATTGCTTTGCATTGAC
TGAACTAGAGTTAATATTTAGATCTATTATGAACATGTGCAGTTCCACGCTCGATGGTCT
TTGTGCTCTTTAAAAAAGAGCTGCTCCCTCAATTCCAAATTATAAGACGATTTGGCTTTT
TTAGATGCATAGCTTTTGCTATGCCCTTAGATATACACAGTCGTACTTGCCTATTTGATA
CTTAGAGAGTAAGAGCCTTAACTTCTGCCACTTGCGACTGAATTGCATGATGATGGCTGC
ACAAGAATTTTGTTGGAGCTTTGCTATTGACATGTGTGCTTTTCAGGGGTTTCACTAGTG
TAAAAAGCCTGGAACTTACTGAAGAAAGTACACCGTCGAGCACAGCCAAATGATGGCTTC
GCCAAGGCTCACCTGGCCCTTGATAAGAGGCTGCATGGTAAGGTATCTACGGACTTTGGC
AGCACAAGCGTCCAGAAATAAAGGTGTGCCCAATCTGCAGCAAGAATGTTGGTCCAAGTA
CGATGACTGTACGAGTTCACTCAAGCTGCACCTGCAGGCAGAGTGTTGACAGCACCATGA
CCATGGAGATCCAGATTCCAGAAATTGATCGAGTCACTCCGTATCAGCCGAGGAAGCCTG
AGCCTGTCTCAGAAGCTGACCAAGGTGTTCCACCAGTGAGCTGAGCTTCTGTTCTGTTTT
TCCTGTATTATAGTCGTAACTTGTACTATCAGACTGAACTTTAGCGACTGTAGGTTTAGC
ACACAAATGTTCAGGTATGAAGGGCGTGATACCAAAGAACAAGACTACGCTCTTGTATGT
GTAGTCTGCAATGTCCGTCGAGGCACTGCTATTGTTCTCGACAACTGGTGTGAAATACAG
TGGTACGAAAATATGATTCAGGTCGAGCCG