Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86793
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:15341433:15347839:1 gene:SORBI_3003G147500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCAAGTGGGAGCTTCTCACTATTTGGTAGCGGGGACTTAAGTGAACACTTGATTAGA
GAAGAACCAACAGGAAAAGATCCATTGGCCTGCGATCAGTCTCCTGAAATAAGCTTGTGG
GAGAGACTTGGGAACTCTTCTGCACTGGACATTGAGTCATCTGAATTTTCATGGGATGTG
TTGTCGTCTCTGCATCATACAGAACATAGTAGTAGTTCAGAGCAAACTGAAGATGAAATG
AATAAAGCTCTTGAGGTGACTGTGAACTCTGGTGGTGTAGTGTTCTTTGCTCTATTTAGT
TCTCCGGGTAACAGTGGAGTTCAAGAAGCGGCAGCTGTTATAAAATTCTCATCATCAAAG
ATGTCAACACAGGCAGAACGTTTGGGTTATGAGTTTGCAAGATTGCTCGGAGTCCATACA
CCACAAGCTAGAGTAGTATATAATTCTAGCTCAGAATGGCTGGCGATTAGGCATGCTGCA
GAAAATGCACGAACAGTAGCAGTTTCAAATAGTGATGAGGTTGGTGAGATGACTTGCTCA
GAGTTGTTAGAAGCTCTTGAGCTAAGCCGCTGCCTTCTACTAATGAGTTATATTCATGGC
TCCCCACTGCTTGAGAGTTCAAAGGCTTTCAATTCACGAGAAGCTGCTTGTGTTACTGCT
TCATCACTGGGAAGGGTTTTGATGCTTGATCTGATACTGCGGAATGAGGACAGGCTCCCA
TGCCGTCAGCTTGGTTGGCGTGGTAATCCTGCAAACCTGATGATTTCAGATAAATCATCC
TTGCGCAGTTTGGACAGATTGGATGATTTCAAGAGCTCTACAGATAGTTACAACCAACTG
GTTACAAAATTTTTGCATAGAGAGAAGCGGTCACACTCCTTGAATGGAAAATTTGATTCA
CCAGGGTTGGATCCCATGCCACCAAAACTAGAAGCATTGATAAATGAAAAGGAAAATGCT
GAAAGAACAAATGGCAATTTTCACATTGTAGCAATCGATACTGGTGTGCCCCGCCGCCCC
CCTGCGGGGCGACGTGTCAAAGATCATGAGAGGTATCCCAAAGTAGTGGAGCTCATTTTG
AATAGCTCAGATTACTCAGCAAGTATCCTATATGAAATTTCTGGTGGTAAGCTTGGGCAT
CCACAACCTGATGAGGTTACTTCCAGTGATTCTTGTTGCTCCCTTTCTGATGAAGATAGT
GCTGCAGTGATTCATGAATTCCGAGGATCATTTCGTGCAGCTCTTAGGGACTTGGAGGGG
TTCCATCTATTTCTTCTCCAACTTTACCAAAAACTGGATGGTGTTTTGCGAGTTTTCTTG
TCCATAATTACTAAAACCTCTGAAGAATCAGACAATAATGATGCCGCCCTTTCCGATTTT
CCTTCACCTGGAGCCAGCTATAGTACTCCTTGCCCTCCTAGTAAGCAACTGAACAATGAG
CTTCATAGTGATTCTGAAATGCTGAAATCTGCAACGAAGTCCTCTTCTGCGGGATCCCGT
GGAAGCTCAGATTCAGTTTCTCCTCTGTCCAGGGACAGTTGGAACAACAAGTACTTCAAG
GGAAGTGCAGAGGCTCCCCGTAGTTTAAGAATGACAATGAAACTTCGTGATTTTTACAAA
AACCCGAAGGTTGATCCTGAAGTGCTTAAAGAGATTGAGCAGTGGAACGAAGCACTTAAG
AACGATGTGATCAAATTTTGCCAAGATAACAATTTTCATTCTGGTTTCTTTGATGGAACT
GAAAACAACATGGTAGCTGATGCCTATGAATTGAAGGTGCGTCTTGAACACATCATTGAA
AGGATAGCCTTGATTTCTGATGCTGCAAACACAGAACGACCTTCTCTTGTTGTCAACAAC
TTGTTCATAGGTGGGGCTCTGGCTGCAAGGTCTAAGTACACCCTACAGCATTTGGGCATT
ACCCATGTACTCTGTTTGTGTTCGAATGAGATTGGTCAATCCGATTCCCAATTTCCTGAT
GTTTTTGAATACAAGAACTTTTCAATTAGTGATGATGATGATGCAAACATCAGTGATCTT
TTTGAGGAAGCATCAGACTTTATTGATCATGTGGATCATGTTGGGGGCAAGGTTCTAGTT
CATTGCTTTGAAGGGAAGAGTCGGAGTGCCACAGTCGTACTTGCCTATTTGATGCTTAGA
GAGGGTTTCACTCTCGCAAAAGCCTGGAACTTACTGAAGAAAGTACACCGTCGAGCACAG
CCAAACGATGGCTTCGCCAAGGCTCTCCTGGCCCTTGATAAGAGGCTGCATGGTAAGGTA
TCTATGGACTGGCAGCACAAGCGGCCAGAAATGAAGGTGTGCCCAATCTGCAGCAAGAAT
GTTGGTCTAAGTACGAGTTCGCTCAAGCTTCACCTGCAAAAGGCACACAAGCGGCTCTCT
GCAGGCAGTGTAGACAGCGCCATGACCATGGAGATCCAGAAATCAATCGAGTCACTCCGG
ATCAGCCGAGGCGGAAGCCTGAGCCCGTCTCAGAAGCTGACCAAGGTGTTCACCAATGAG
CTGAGCTTCTGA

Peptide Sequence

PEP ID

OQU86793
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:15341433:15347839:1 gene:SORBI_3003G147500 transcript:OQU86793 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPSGSFSLFGSGDLSEHLIREEPTGKDPLACDQSPEISLWERLGNSSALDIESSEFSWDV
LSSLHHTEHSSSSEQTEDEMNKALEVTVNSGGVVFFALFSSPGNSGVQEAAAVIKFSSSK
MSTQAERLGYEFARLLGVHTPQARVVYNSSSEWLAIRHAAENARTVAVSNSDEVGEMTCS
ELLEALELSRCLLLMSYIHGSPLLESSKAFNSREAACVTASSLGRVLMLDLILRNEDRLP
CRQLGWRGNPANLMISDKSSLRSLDRLDDFKSSTDSYNQLVTKFLHREKRSHSLNGKFDS
PGLDPMPPKLEALINEKENAERTNGNFHIVAIDTGVPRRPPAGRRVKDHERYPKVVELIL
NSSDYSASILYEISGGKLGHPQPDEVTSSDSCCSLSDEDSAAVIHEFRGSFRAALRDLEG
FHLFLLQLYQKLDGVLRVFLSIITKTSEESDNNDAALSDFPSPGASYSTPCPPSKQLNNE
LHSDSEMLKSATKSSSAGSRGSSDSVSPLSRDSWNNKYFKGSAEAPRSLRMTMKLRDFYK
NPKVDPEVLKEIEQWNEALKNDVIKFCQDNNFHSGFFDGTENNMVADAYELKVRLEHIIE
RIALISDAANTERPSLVVNNLFIGGALAARSKYTLQHLGITHVLCLCSNEIGQSDSQFPD
VFEYKNFSISDDDDANISDLFEEASDFIDHVDHVGGKVLVHCFEGKSRSATVVLAYLMLR
EGFTLAKAWNLLKKVHRRAQPNDGFAKALLALDKRLHGKVSMDWQHKRPEMKVCPICSKN
VGLSTSSLKLHLQKAHKRLSAGSVDSAMTMEIQKSIESLRISRGGSLSPSQKLTKVFTNE
LSF

Transcript Sequence

Transcript ID

OQU86793
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:15341433:15347839:1 gene:SORBI_3003G147500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTGAGAAGGGAGGGGGAGCTGTTGGCAAATCTGAAGCTTTACCTGCTTCGGGACATGGTT
GCGAAATGCAGCTTGATTTAGGTTTGATATTGGTTCTTGATCCGGCTTGGTGTATCCGTG
AGTCTTTCATTGCCATTTTCAAGTGCGCCTTTCCCCCAAATGCAGTGAGGCTTGATGCGG
GCTTATTTGGAGGCCCATTTGATCATGAATGGGGGAAAGCAGTTTGTTCTCGTCTTGTTA
TTTCAATTTTTGCACAATGCATTATACTTGACCCAATGACACCTCCTGATCCAAACTAGA
TCAGCATCCTGCTTCAATTCGAGTTTATACATGCTAATTTCTCCAAAGGTAGGTCATGTG
CCAAATCTTGGAACTTTCTTCCTTGTAAGACCAGGGAAGTATTTCTTTTTTCACTCCAGT
TCGAGTTGAGCATATTAGGGATGTAAGTGGATTGCCCCAGATGAGTGATTGACCCATACA
TGAGTAGTTCATTTGGTTTACAAACACGTGATCCTGATGAGTAATGATCTACCAATTAAG
TGAACACTGAACTCCTGACTAACTGCAGTGGGTTTTGAATTGACCCAACCACTTGCATCC
GCGGAGCATAAGCTGGTAAATGGAAGAGTTAGTCTCGTGTTAGTGTTAGTTCTGTGGCCA
TGTACTCTTCTGTTTGCTAGAACTTGGTAATGCAGGCAATCTTGGTGCACAAAATTCCAT
CTGTTCATCTCCAGAAAAGAACTGCTTCAGATCTCTCCCTTTTTTTCTCTTATTTTTTCA
TCAATCAAGATATGCAATTAGAGTATTCTGAAATGTCTTGAAGCAGAAATACATAAATGT
AATATAATTTTTTACATCTCTTACAGGAAAACGAGGATAGAGATCTGAAGCTATCTTCTC
GTGTAAGTGTTGTTTCCCCAATGTTCATTTGTAATTTTAAATTTGATACTTTATCTTACT
GAGTAAAACCAAACAAATCTGCTTGTGTTTAGGTGGTTTCTTTATTATTTGGTGGTGATA
TATCGACACCAGCACAAACATTTGAGAAATGGCTCTCATTAGTACGTAAGAGGAGTGGGG
CTTTCCGGCCATCTGGGTTCCCACATCGAGGTTCAAGGATTGAAGTCATGCCAAGTGGGA
GCTTCTCACTATTTGGTAGCGGGGACTTAAGTGAACACTTGATTAGAGAAGAACCAACAG
GAAAAGATCCATTGGCCTGCGATCAGTCTCCTGAAATAAGCTTGTGGGAGAGACTTGGGA
ACTCTTCTGCACTGGACATTGAGTCATCTGAATTTTCATGGGATGTGTTGTCGTCTCTGC
ATCATACAGAACATAGTAGTAGTTCAGAGCAAACTGAAGATGAAATGAATAAAGCTCTTG
AGGTGACTGTGAACTCTGGTGGTGTAGTGTTCTTTGCTCTATTTAGTTCTCCGGGTAACA
GTGGAGTTCAAGAAGCGGCAGCTGTTATAAAATTCTCATCATCAAAGATGTCAACACAGG
CAGAACGTTTGGGTTATGAGTTTGCAAGATTGCTCGGAGTCCATACACCACAAGCTAGAG
TAGTATATAATTCTAGCTCAGAATGGCTGGCGATTAGGCATGCTGCAGAAAATGCACGAA
CAGTAGCAGTTTCAAATAGTGATGAGGTTGGTGAGATGACTTGCTCAGAGTTGTTAGAAG
CTCTTGAGCTAAGCCGCTGCCTTCTACTAATGAGTTATATTCATGGCTCCCCACTGCTTG
AGAGTTCAAAGGCTTTCAATTCACGAGAAGCTGCTTGTGTTACTGCTTCATCACTGGGAA
GGGTTTTGATGCTTGATCTGATACTGCGGAATGAGGACAGGCTCCCATGCCGTCAGCTTG
GTTGGCGTGGTAATCCTGCAAACCTGATGATTTCAGATAAATCATCCTTGCGCAGTTTGG
ACAGATTGGATGATTTCAAGAGCTCTACAGATAGTTACAACCAACTGGTTACAAAATTTT
TGCATAGAGAGAAGCGGTCACACTCCTTGAATGGAAAATTTGATTCACCAGGGTTGGATC
CCATGCCACCAAAACTAGAAGCATTGATAAATGAAAAGGAAAATGCTGAAAGAACAAATG
GCAATTTTCACATTGTAGCAATCGATACTGGTGTGCCCCGCCGCCCCCCTGCGGGGCGAC
GTGTCAAAGATCATGAGAGGTATCCCAAAGTAGTGGAGCTCATTTTGAATAGCTCAGATT
ACTCAGCAAGTATCCTATATGAAATTTCTGGTGGTAAGCTTGGGCATCCACAACCTGATG
AGGTTACTTCCAGTGATTCTTGTTGCTCCCTTTCTGATGAAGATAGTGCTGCAGTGATTC
ATGAATTCCGAGGATCATTTCGTGCAGCTCTTAGGGACTTGGAGGGGTTCCATCTATTTC
TTCTCCAACTTTACCAAAAACTGGATGGTGTTTTGCGAGTTTTCTTGTCCATAATTACTA
AAACCTCTGAAGAATCAGACAATAATGATGCCGCCCTTTCCGATTTTCCTTCACCTGGAG
CCAGCTATAGTACTCCTTGCCCTCCTAGTAAGCAACTGAACAATGAGCTTCATAGTGATT
CTGAAATGCTGAAATCTGCAACGAAGTCCTCTTCTGCGGGATCCCGTGGAAGCTCAGATT
CAGTTTCTCCTCTGTCCAGGGACAGTTGGAACAACAAGTACTTCAAGGGAAGTGCAGAGG
CTCCCCGTAGTTTAAGAATGACAATGAAACTTCGTGATTTTTACAAAAACCCGAAGGTTG
ATCCTGAAGTGCTTAAAGAGATTGAGCAGTGGAACGAAGCACTTAAGAACGATGTGATCA
AATTTTGCCAAGATAACAATTTTCATTCTGGTTTCTTTGATGGAACTGAAAACAACATGG
TAGCTGATGCCTATGAATTGAAGGTGCGTCTTGAACACATCATTGAAAGGATAGCCTTGA
TTTCTGATGCTGCAAACACAGAACGACCTTCTCTTGTTGTCAACAACTTGTTCATAGGTG
GGGCTCTGGCTGCAAGGTCTAAGTACACCCTACAGCATTTGGGCATTACCCATGTACTCT
GTTTGTGTTCGAATGAGATTGGTCAATCCGATTCCCAATTTCCTGATGTTTTTGAATACA
AGAACTTTTCAATTAGTGATGATGATGATGCAAACATCAGTGATCTTTTTGAGGAAGCAT
CAGACTTTATTGATCATGTGGATCATGTTGGGGGCAAGGTTCTAGTTCATTGCTTTGAAG
GGAAGAGTCGGAGTGCCACAGTCGTACTTGCCTATTTGATGCTTAGAGAGGGTTTCACTC
TCGCAAAAGCCTGGAACTTACTGAAGAAAGTACACCGTCGAGCACAGCCAAACGATGGCT
TCGCCAAGGCTCTCCTGGCCCTTGATAAGAGGCTGCATGGTAAGGTATCTATGGACTGGC
AGCACAAGCGGCCAGAAATGAAGGTGTGCCCAATCTGCAGCAAGAATGTTGGTCTAAGTA
CGAGTTCGCTCAAGCTTCACCTGCAAAAGGCACACAAGCGGCTCTCTGCAGGCAGTGTAG
ACAGCGCCATGACCATGGAGATCCAGAAATCAATCGAGTCACTCCGGATCAGCCGAGGCG
GAAGCCTGAGCCCGTCTCAGAAGCTGACCAAGGTGTTCACCAATGAGCTGAGCTTCTGAT
CTGTTTTCCTGTACTATAGCTGAGGCAATGTACTTGGCTCACACTGTCGTAACTTGTACT
ATTAGACTGAACTTTGGTGACTATAGACTATAGATTTAGTTCACACGCCTGTATGATTAG
CACAAGAATGTTCAGGTATGAAGGGCGCACCACTAAGGAATAAGACTACGCTCTTGTACC
TGTAGTCTGCAATTTGCAGTTTTCTTCTAATGTGATCTACAGAGTTATTATTGTATATTG
TATGGATATTGTCCCGTGTTCATTCCTGTTGTTTGGTCTTTCAAGGTGGCACCTAAGGTA
CATTTTCTATGTGGTTTCTTACATAAAA