Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86719
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:12590395:12594819:1 gene:SORBI_3003G133700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTCCTCCACCTGCTTCCGCTCTCCTGCCCCGCGCCGCCGTTCCGCCTGCGCGGCGGC
TCGCCGCGGGTCCGGGCCGGGGGCAGGGCCAGGACGCGGGCGCTGCGGGGGGCGGACGTG
GAGCCGGAGACACCTCCGCGAAGGCGCCGCGGCCGCGATGACGACCACGATCCGCACGCG
GCCGGGAGCGGTGGAGACACCGGGGCGCTGCTGGCGTCGGTCAGGAGGCTTCTGCTCTCC
GAGGCGCCGACGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGCAGGGACAGTTCCCC
AAGCGTTGGGCCATCGTCTTCCTCTGCTTCTCTGCATTCCTGCTCTGCAACATGGACCGC
GTAAATATGAGCATTGCTATTCTGCCTATGTCCGCAGAGTATGGTTGGAACCCACAGACT
GTTGGTCTCATCCAGTCATCTTTCTTCTGGGGCTACCTCCTAACTCAGATAGCTGGAGGA
ATATGGGCAGATACTGTTGGAGGAAAGACTGTCCTTGGTTTTGGTGTGGTTTGGTGGTCC
ATAGCTACGGCTCTTACTCCTGTTGCAGCAAAGCTTGGCTTGCCATTTCTTCTTGTTGTG
CGGGCTTTCATGGGAATCGGTGAGGGGGTTGCCATGCCTGCAATGAACAATATTCTTTCG
AAATGGGTTCCTGTATCAGAGAGGAGCAGATCATTGGCTCTTGTGTATAGTGGAATGTAC
CTTGGGTCAGTTACAGGACTTGCATTTTCCCCCTTGCTGATACATAAGTTCGGATGGCCA
TCAGTCTTCTATTCATTCGGGTCCCTAGGGGCTGTTTGGGTCACGACATGGGCAACCAAG
GCATATAGTTCCCCACTTGAAGATCCTGGAATCAGCGCTGCAGAAAAGAAGCTTATTGCT
AGTCAGAGCACAGCAGGCGAGCCTGTTAAAACAATTCCATGGAGATTGATATTATCAAAA
CCGCCTGTTTGGGCACTTATAGTTTCTCATTTCTGCCATAACTGGGGAACTTTCATTTTG
CTCACATGGATGCCCACATACTACAACCAGGTTCTGAAATTCAACCTCATGGAATCGGGC
CTTGTCTGTGTTCTTCCCTGGTTCACGATGGCAGTTTCTGCAAATGTTGGTGGTTGGATT
GCAGACACACTTGTCAGTAGAGGAGTATCTGTGACAACTGTTCGGAAGATCATGCAATCA
ATCGGATTCTTGGGGCCAGCATTTTTTCTAACTCAACTAAGCCATGTCGACTCGCCTGCC
ATGGCAGTTTTATGCATGGCTTGTAGCCAGGGAACTGATGCATTCTCGCAGTCTGGTCTG
TACTCAAACCATCAAGATATAGGCCCTCGATATGCAGGTGTATTGCTTGGTCTTTCCAAC
ACGGCTGGGGTCTTAGCTGGTGTATTTGGCACAGCAGCAACAGGATACATCTTGCAGCAT
GGTTCTTGGGATAACGTATTCGAGTTATCAGTGGTGCTTTACCTGGTAGGGACTTTGGTA
TGGAATGTATTCTCAACTGGCGAGAAGATTCTTGATTGA

Peptide Sequence

PEP ID

OQU86719
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:12590395:12594819:1 gene:SORBI_3003G133700 transcript:OQU86719 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLLHLLPLSCPAPPFRLRGGSPRVRAGGRARTRALRGADVEPETPPRRRRGRDDDHDPHA
AGSGGDTGALLASVRRLLLSEAPTAAAAAEEEEEEQGQFPKRWAIVFLCFSAFLLCNMDR
VNMSIAILPMSAEYGWNPQTVGLIQSSFFWGYLLTQIAGGIWADTVGGKTVLGFGVVWWS
IATALTPVAAKLGLPFLLVVRAFMGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMY
LGSVTGLAFSPLLIHKFGWPSVFYSFGSLGAVWVTTWATKAYSSPLEDPGISAAEKKLIA
SQSTAGEPVKTIPWRLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLMESG
LVCVLPWFTMAVSANVGGWIADTLVSRGVSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA
MAVLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQH
GSWDNVFELSVVLYLVGTLVWNVFSTGEKILD

Transcript Sequence

Transcript ID

OQU86719
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:12590395:12594819:1 gene:SORBI_3003G133700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGGGGCACAAAAAAAAAAATCTCCGCCACCACCGGGAGCTTCGCGTGCGCCGCTTGCTCA
CCGCCCGCCCGCGCGAACACGCCTGCCCCTCCTTCTGCAGCAGCCATGCTCCTCCACCTG
CTTCCGCTCTCCTGCCCCGCGCCGCCGTTCCGCCTGCGCGGCGGCTCGCCGCGGGTCCGG
GCCGGGGGCAGGGCCAGGACGCGGGCGCTGCGGGGGGCGGACGTGGAGCCGGAGACACCT
CCGCGAAGGCGCCGCGGCCGCGATGACGACCACGATCCGCACGCGGCCGGGAGCGGTGGA
GACACCGGGGCGCTGCTGGCGTCGGTCAGGAGGCTTCTGCTCTCCGAGGCGCCGACGGCG
GCGGCGGCGGCGGAGGAGGAGGAGGAGGAGCAGGGACAGTTCCCCAAGCGTTGGGCCATC
GTCTTCCTCTGCTTCTCTGCATTCCTGCTCTGCAACATGGACCGCGTAAATATGAGCATT
GCTATTCTGCCTATGTCCGCAGAGTATGGTTGGAACCCACAGACTGTTGGTCTCATCCAG
TCATCTTTCTTCTGGGGCTACCTCCTAACTCAGATAGCTGGAGGAATATGGGCAGATACT
GTTGGAGGAAAGACTGTCCTTGGTTTTGGTGTGGTTTGGTGGTCCATAGCTACGGCTCTT
ACTCCTGTTGCAGCAAAGCTTGGCTTGCCATTTCTTCTTGTTGTGCGGGCTTTCATGGGA
ATCGGTGAGGGGGTTGCCATGCCTGCAATGAACAATATTCTTTCGAAATGGGTTCCTGTA
TCAGAGAGGAGCAGATCATTGGCTCTTGTGTATAGTGGAATGTACCTTGGGTCAGTTACA
GGACTTGCATTTTCCCCCTTGCTGATACATAAGTTCGGATGGCCATCAGTCTTCTATTCA
TTCGGGTCCCTAGGGGCTGTTTGGGTCACGACATGGGCAACCAAGGCATATAGTTCCCCA
CTTGAAGATCCTGGAATCAGCGCTGCAGAAAAGAAGCTTATTGCTAGTCAGAGCACAGCA
GGCGAGCCTGTTAAAACAATTCCATGGAGATTGATATTATCAAAACCGCCTGTTTGGGCA
CTTATAGTTTCTCATTTCTGCCATAACTGGGGAACTTTCATTTTGCTCACATGGATGCCC
ACATACTACAACCAGGTTCTGAAATTCAACCTCATGGAATCGGGCCTTGTCTGTGTTCTT
CCCTGGTTCACGATGGCAGTTTCTGCAAATGTTGGTGGTTGGATTGCAGACACACTTGTC
AGTAGAGGAGTATCTGTGACAACTGTTCGGAAGATCATGCAATCAATCGGATTCTTGGGG
CCAGCATTTTTTCTAACTCAACTAAGCCATGTCGACTCGCCTGCCATGGCAGTTTTATGC
ATGGCTTGTAGCCAGGGAACTGATGCATTCTCGCAGTCTGGTCTGTACTCAAACCATCAA
GATATAGGCCCTCGATATGCAGGTGTATTGCTTGGTCTTTCCAACACGGCTGGGGTCTTA
GCTGGTGTATTTGGCACAGCAGCAACAGGATACATCTTGCAGCATGGTTCTTGGGATAAC
GTATTCGAGTTATCAGTGGTGCTTTACCTGGTAGGGACTTTGGTATGGAATGTATTCTCA
ACTGGCGAGAAGATTCTTGATTGAAGAGTGTACATAGTGTGCTTACAGTTCAGAAGTGAA
ATTCATTTCGGAGCAACAACTTAACCCCTGGACACAATACACTTCAAGATAACAAATGTG
TCATCGTCCAGCTCAGCTCTTGGATGAGGCAACATGATTCTAATGTCAATACATGCAATG
CCAAGCACGAGAAGTATCAAGTCTTCACATCCCAGCACGAGACCAGGTGAAGCATAGATG
AGTTGAGCGATGCACCCCTTCCGGACATGCACTGTATATTGTGTTAGCATAGGTATCATG
TACAGCATAGTAGAAAGTTTCATCATACACAGTAGTCTTTTCTGACTTGTACAATTTTTT
CCTCTTGAATAGCTTTGTTCCTGTAACAGCCCGACGCAGATCAAAATAAGGAAATCTGGG
GAAGGGGCTACTACTAATGCAAACATTTGATGAATATTTATCTATTTGCAGTCTCAGTTT
TTACTATGGCAAGCCTGTTCGCTTAAGCTTATAAGCCGAATCTGCCAGTCATTTAGCAGT
GTTTTTCTCTGTAAAAAAATCAGCCAACAATACTTTCTGCCATGGCTTATCAGCCAAACA
ACATATGAGTTCCTCAAAGATGAAGTACAGTATCTATCCTATCCCGAAGGGAAGCATTAC
AGACCAAAGCAAAAATCAACTGGCACATGGCATTTTACACGGTTCCAGTTCATAGATAAA
CCATACGGTACATCAGTCCAAGAGGTCTCAACTCAGATACAAGACTTTGATAAGACTATT
TACAAGGCGTGAGTTGCCACTTGCCATCCAGCTTTTTTACTTGCAGGCACGCTACAGGCT
ACCAATACCAGGCTACCTGGCAATCTGGCATGCTTTCCTACCAGATGCTCCAATAAAGTT
TTGATCCGCTGATGTCCATGTCACGTGTGCCATGAGCTGCTTGGCGCCTTCAACAGTTTG
TGTCATATGTTGCAAGCCCTTGTAGCTCTGGGCCTTCCATCCTTGGATTATTGTCGA