Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86603
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:10064929:10069811:-1 gene:SORBI_3003G111900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGCAAGATGCTTCCCATGGCAGCAGCCCTCTTTTTCTTCTACGCCGCCGTGGCCCTG
CTCCGAGCTGCAGGCAGCCAAGCGGCGGTGGTCGAGCACACCTTTGTTGTAAAGCAAGTG
TATATGCGACACCTTTGCAATGATACGCTGGCCACCGTGGTCAACGGCCAGTTTCCAGGA
CCACCGGTAGAGGCTACGGAAGGGGACACAGTGATTGTACACCTCGTCAACGAGTCACCC
TTTGAAATAACAATTCACTGGCATGGCGTAAAGCAGCGACTAACGTGCTGGGCGGATGGC
GCCGGAATGGTAACACAGTGCCCAATCCAGCCAAATTCCACATTCACCTACCGTTTCAAG
GTGGACGGCCAGGAGGGTACGCTGTGGTGGCACTCTCACGTCTCCATCCTCCGGGCAACC
CTGCATGGCATCATCATCATCCGCCCAAAGTCCGGCTCCTACCCTTTCAAGAATCAGCCT
CACATGGATGTTCCTATCATCATAAGTGAATGGTGGCAGAGAGATTTGATGAAAGTGGAC
AAGAACTTCTCCAATGGGGGCTCATTCAGTGATAACCCCGCTGGGGCCACCATCAATGGA
AAACTTGGCGTCGTAGAAGACAACTTCGTTCTGAACGTGGAGCGTGGCAAGACGTACCTG
CTCCGGCTAGTGAACGGGGCGCTCTTCTCCGAGTACTACTTCAAGGTCGCCGGGCACAAG
TTCACGGTGGTCGGCGCCGACGCCAACTACATCACGCCGTACACCACCGACGTGGTCGCC
ATCGCGCCCGGCGAGACGTTCGACGTCCTCATGGTCGCCGACGCCCCGCCCTGCCGCTAC
TACATGGCCGCGCTGGCCAACCAGCCGCCGGCCCCGGACCCCCAGATCCCGGTGTTCGCG
TCCAGAGGCATAGTGCAGTACACGGACATGGACAGGTGCAGAACCCAGGCGCCGCCTCCG
ATGCCGGAGATGCCCGACCAGCACGACACGACGACGACGTTCTACTTCCACGGCAACCTG
TCCGGGCTCCCCACCCACCCGCTGCTGCCGCAGCTCCGTGGCCGCATCGACGAGCACCTC
TTCGTCACGCTCGGCAAGGGCACCGTCTGCCGAGACGACAAGCCGTCCTGCAAGAGGGGA
GGCAGCGACGAGGCCGTCGAGGTGGCCTACATGAACAACGTCTCCTTCCGGCTCCCCGAC
AAGATGTCGCTGCTGGAGGCGCGGCAGTACGAGTACGGCGGCGGCGGCAACGACGTGGCG
GCGGTGGTGGTGGAGGAGCTGCCGACCAGGCCGCCGAGCGTGTTCAACTTCACCGACCCG
GCGCTGATCCCGGTCGGCCCCGGCGCGCCGCTGGAGAAGCTGGAGGCGACGCGGAAGGCG
ACGACGGTGCGGCGGTTCAGGCACAACGCCACGGTGGAGGTGGTGTTCCAGAGCACGGCG
ACGATGCAGAGCGACTCCAACCCGATGCACCTCCACGGGCACGACTTCTTCGTGCTGGCG
CAGGGCCACGGCAACTACGACCGGGCCAGGCACGTGAGGACCTACAACCTGGTGGACCCG
CTGCTCAAGAACACGGTGCAGGTGCCGAGGCTTGGATGGGCGGCCGTCCGCTTCGTCGCC
GACAACCCGGGGGCGTGGTTCATGCACTGCCACTTCGAGTTCCACATCGCCATGGGCATG
GCAACGGTGTTTGAGGTGGCCAACGGAGCCACGCCGGAAGACACTCTGCCCCCGCCGCCG
TCAGATCTTCCAAAGTGCATACACAAGAAGGAATAA

Peptide Sequence

PEP ID

OQU86603
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:10064929:10069811:-1 gene:SORBI_3003G111900 transcript:OQU86603 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSKMLPMAAALFFFYAAVALLRAAGSQAAVVEHTFVVKQVYMRHLCNDTLATVVNGQFPG
PPVEATEGDTVIVHLVNESPFEITIHWHGVKQRLTCWADGAGMVTQCPIQPNSTFTYRFK
VDGQEGTLWWHSHVSILRATLHGIIIIRPKSGSYPFKNQPHMDVPIIISEWWQRDLMKVD
KNFSNGGSFSDNPAGATINGKLGVVEDNFVLNVERGKTYLLRLVNGALFSEYYFKVAGHK
FTVVGADANYITPYTTDVVAIAPGETFDVLMVADAPPCRYYMAALANQPPAPDPQIPVFA
SRGIVQYTDMDRCRTQAPPPMPEMPDQHDTTTTFYFHGNLSGLPTHPLLPQLRGRIDEHL
FVTLGKGTVCRDDKPSCKRGGSDEAVEVAYMNNVSFRLPDKMSLLEARQYEYGGGGNDVA
AVVVEELPTRPPSVFNFTDPALIPVGPGAPLEKLEATRKATTVRRFRHNATVEVVFQSTA
TMQSDSNPMHLHGHDFFVLAQGHGNYDRARHVRTYNLVDPLLKNTVQVPRLGWAAVRFVA
DNPGAWFMHCHFEFHIAMGMATVFEVANGATPEDTLPPPPSDLPKCIHKKE

Transcript Sequence

Transcript ID

OQU86603
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:10064929:10069811:-1 gene:SORBI_3003G111900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACGCCGGAGAAGACATATGGTTACCAGCCATCATAGAGGAAACTAACACTACTCCTACCA
ATTGAAAACCAAGATGAGCAAGATGCTTCCCATGGCAGCAGCCCTCTTTTTCTTCTACGC
CGCCGTGGCCCTGCTCCGAGCTGCAGGCAGCCAAGCGGCGGTGGTCGAGCACACCTTTGT
TGTAAAGCAAGTGTATATGCGACACCTTTGCAATGATACGCTGGCCACCGTGGTCAACGG
CCAGTTTCCAGGACCACCGGTAGAGGCTACGGAAGGGGACACAGTGATTGTACACCTCGT
CAACGAGTCACCCTTTGAAATAACAATTCACTGGCATGGCGTAAAGCAGCGACTAACGTG
CTGGGCGGATGGCGCCGGAATGGTAACACAGTGCCCAATCCAGCCAAATTCCACATTCAC
CTACCGTTTCAAGGTGGACGGCCAGGAGGGTACGCTGTGGTGGCACTCTCACGTCTCCAT
CCTCCGGGCAACCCTGCATGGCATCATCATCATCCGCCCAAAGTCCGGCTCCTACCCTTT
CAAGAATCAGCCTCACATGGATGTTCCTATCATCATAAGTGAATGGTGGCAGAGAGATTT
GATGAAAGTGGACAAGAACTTCTCCAATGGGGGCTCATTCAGTGATAACCCCGCTGGGGC
CACCATCAATGGAAAACTTGGCGTCGTAGAAGACAACTTCGTTCTGAACGTGGAGCGTGG
CAAGACGTACCTGCTCCGGCTAGTGAACGGGGCGCTCTTCTCCGAGTACTACTTCAAGGT
CGCCGGGCACAAGTTCACGGTGGTCGGCGCCGACGCCAACTACATCACGCCGTACACCAC
CGACGTGGTCGCCATCGCGCCCGGCGAGACGTTCGACGTCCTCATGGTCGCCGACGCCCC
GCCCTGCCGCTACTACATGGCCGCGCTGGCCAACCAGCCGCCGGCCCCGGACCCCCAGAT
CCCGGTGTTCGCGTCCAGAGGCATAGTGCAGTACACGGACATGGACAGGTGCAGAACCCA
GGCGCCGCCTCCGATGCCGGAGATGCCCGACCAGCACGACACGACGACGACGTTCTACTT
CCACGGCAACCTGTCCGGGCTCCCCACCCACCCGCTGCTGCCGCAGCTCCGTGGCCGCAT
CGACGAGCACCTCTTCGTCACGCTCGGCAAGGGCACCGTCTGCCGAGACGACAAGCCGTC
CTGCAAGAGGGGAGGCAGCGACGAGGCCGTCGAGGTGGCCTACATGAACAACGTCTCCTT
CCGGCTCCCCGACAAGATGTCGCTGCTGGAGGCGCGGCAGTACGAGTACGGCGGCGGCGG
CAACGACGTGGCGGCGGTGGTGGTGGAGGAGCTGCCGACCAGGCCGCCGAGCGTGTTCAA
CTTCACCGACCCGGCGCTGATCCCGGTCGGCCCCGGCGCGCCGCTGGAGAAGCTGGAGGC
GACGCGGAAGGCGACGACGGTGCGGCGGTTCAGGCACAACGCCACGGTGGAGGTGGTGTT
CCAGAGCACGGCGACGATGCAGAGCGACTCCAACCCGATGCACCTCCACGGGCACGACTT
CTTCGTGCTGGCGCAGGGCCACGGCAACTACGACCGGGCCAGGCACGTGAGGACCTACAA
CCTGGTGGACCCGCTGCTCAAGAACACGGTGCAGGTGCCGAGGCTTGGATGGGCGGCCGT
CCGCTTCGTCGCCGACAACCCGGGGGCGTGGTTCATGCACTGCCACTTCGAGTTCCACAT
CGCCATGGGCATGGCAACGGTGTTTGAGGTGGCCAACGGAGCCACGCCGGAAGACACTCT
GCCCCCGCCGCCGTCAGATCTTCCAAAGTGCATACACAAGAAGGAATAAGCTAGCTAGAA
AATACAGGAAGTGTGATACAGTATTACTAGTATCTTTGTATTCGAGGAGGTTTGCAGAAG
ATGGACATTATATTTATATTTATATTTATATTTAACCACGCTACACGGCTGGTTAAGGCA
TCTTGCATTTTGGAGTAATAATGCTATTGTATTAATTACCTTAGTTTTGAGTAATTCTTG
TAACGACA