Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86586
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:9818721:9822264:-1 gene:SORBI_3003G108700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGCCCAAACCGATCTGGGTGCGCCAGGCTGAGGAGGCCAAGCTCAAGTCCGAG
GCGGAGACCGCTGCCGCCGCCAAGGCCGCCTTCGAAGCCACCTTCAAGGCCCTCGCTGCC
GCACCCGGCGACGCCGACAACGACGCCGACCCCGCCCCACCCTCCCCGGCCGAGCCTGCC
TCCCCCGAGTCCGACGAAGACGATGCCCCGGCCCCGCCAGGCCCTGTCGACCCGTCCAAG
TGCTCCGCCGCGGGGCCCGGCATCGCTGGCGGTTCCGCCGGAACGCCCTCCACCTTCACC
GTCGTCGCCAAGGACCGCCACAGCCGGAGGCTCACCGCCGGCGGGGCGCGCGTGCGCGTG
CGCGTCTCGCCCGCTGCGGGAGTCGGCGGGGACGATCTCGAGGGCGCTGTCAAGGACAAC
GGGGACGGATCCTACACGGTCACCTACGTCGTCCCCAAGCGCGGCAACTACATGGTACAC
ATCGAGCTCGACGGCGCCCCCGTCATGGGGAGCCCCTTCCCCGTCTTCTTCAGCGGCTCC
ACCGCCACACCATCAGCCGCTTTCCCCACCGCTCTACCCGCGGCCAGCTCTGCCTACCCC
AACATGGTCAACCAGACCATGCCTAATATGCCCAATTACACAGGCGCGCCCTCCAGTGCC
TTCCCCAGCCTCCTCGGGGTCATGCCTAGTTCCTCTGTTGGTTCCTCGGGCGGAGTTATC
CTGCCAGGGGTTGGTTCTTCACTGGGGGAGATATGCCGGGACTACATGAGTGGGAAGTGC
ACAAAGGCGGAGACTGACTGTAAGTTCATGCACCCACCGCAACAGCTGCTGATGTCGGTG
CTCGCTGCCACGACTTCTGTCAATGCTCTTGGGCATGCCCCCTTGGCGCCCTCTGCGGCT
GCCATGGCAGCTGCTCAGGCCATCATGGCTGCGCAGGCACTGCAGGCACATGCTGCTCAG
GCCAAGGCCGCAGGTGGGACTTCAGGCTCAATAAACAAAGCTGATGAAGCTGATGCCCTG
AAGAGAACAGTTCAAATTAGCAACCTGAGTCCAGTTCTTACTGTGGATTATATTAAGCAG
CTATTTGGGTTATGTGGTAAAGTTGTTGATTGTACCACCACAGATTCAAAGCACATTGCT
TATGTCGAGTACTCCAAACCTGAAGAAGCAACTGCAGCGTTGGAGTTCAATAGCAAGAAT
GTTGGTGGTCGTCCATTGAATGTGGAGATGGCTAAATCTCTTCCTCCTAAAGCAAATAAT
AACTTGCCCATGATGATGCAGCAAGCCGTTCAGTTGCAACAGATGCAATTCCAGCAGGCA
CTAATGATGCAACAGTCAATAGCAACCCAACAGGCTGCTGCACGTGCCGCCACCATGAAG
TCTGCCACTGAAGCAGCTGCAGCAAGGGCTGCTGAGATAAGCAGGAAGTTGAAGGCGGAG
GGCTTTGGTGGGGACAACATTGAAGGAAAAGATGCCAAAGGGAAGTCAAGGAATATGCTA
TAG

Peptide Sequence

PEP ID

OQU86586
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:9818721:9822264:-1 gene:SORBI_3003G108700 transcript:OQU86586 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAPKPIWVRQAEEAKLKSEAETAAAAKAAFEATFKALAAAPGDADNDADPAPPSPAEPA
SPESDEDDAPAPPGPVDPSKCSAAGPGIAGGSAGTPSTFTVVAKDRHSRRLTAGGARVRV
RVSPAAGVGGDDLEGAVKDNGDGSYTVTYVVPKRGNYMVHIELDGAPVMGSPFPVFFSGS
TATPSAAFPTALPAASSAYPNMVNQTMPNMPNYTGAPSSAFPSLLGVMPSSSVGSSGGVI
LPGVGSSLGEICRDYMSGKCTKAETDCKFMHPPQQLLMSVLAATTSVNALGHAPLAPSAA
AMAAAQAIMAAQALQAHAAQAKAAGGTSGSINKADEADALKRTVQISNLSPVLTVDYIKQ
LFGLCGKVVDCTTTDSKHIAYVEYSKPEEATAALEFNSKNVGGRPLNVEMAKSLPPKANN
NLPMMMQQAVQLQQMQFQQALMMQQSIATQQAAARAATMKSATEAAAARAAEISRKLKAE
GFGGDNIEGKDAKGKSRNML

Transcript Sequence

Transcript ID

OQU86586
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:9818721:9822264:-1 gene:SORBI_3003G108700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GACTCCGCCTTCTCTTCCTCGGCACCCCTCATCTGCTCCGCATCTGCTCCCCCTCCGCCA
AACCCTAGCCCGCAAGCAGAGCTTATTGAAGGCAGGCTAGGCGAGAGCAGCGTCCGCCGC
CGCGCCCTCATGGCGGCGCCCAAACCGATCTGGGTGCGCCAGGCTGAGGAGGCCAAGCTC
AAGTCCGAGGCGGAGACCGCTGCCGCCGCCAAGGCCGCCTTCGAAGCCACCTTCAAGGCC
CTCGCTGCCGCACCCGGCGACGCCGACAACGACGCCGACCCCGCCCCACCCTCCCCGGCC
GAGCCTGCCTCCCCCGAGTCCGACGAAGACGATGCCCCGGCCCCGCCAGGCCCTGTCGAC
CCGTCCAAGTGCTCCGCCGCGGGGCCCGGCATCGCTGGCGGTTCCGCCGGAACGCCCTCC
ACCTTCACCGTCGTCGCCAAGGACCGCCACAGCCGGAGGCTCACCGCCGGCGGGGCGCGC
GTGCGCGTGCGCGTCTCGCCCGCTGCGGGAGTCGGCGGGGACGATCTCGAGGGCGCTGTC
AAGGACAACGGGGACGGATCCTACACGGTCACCTACGTCGTCCCCAAGCGCGGCAACTAC
ATGGTACACATCGAGCTCGACGGCGCCCCCGTCATGGGGAGCCCCTTCCCCGTCTTCTTC
AGCGGCTCCACCGCCACACCATCAGCCGCTTTCCCCACCGCTCTACCCGCGGCCAGCTCT
GCCTACCCCAACATGGTCAACCAGACCATGCCTAATATGCCCAATTACACAGGCGCGCCC
TCCAGTGCCTTCCCCAGCCTCCTCGGGGTCATGCCTAGTTCCTCTGTTGGTTCCTCGGGC
GGAGTTATCCTGCCAGGGGTTGGTTCTTCACTGGGGGAGATATGCCGGGACTACATGAGT
GGGAAGTGCACAAAGGCGGAGACTGACTGTAAGTTCATGCACCCACCGCAACAGCTGCTG
ATGTCGGTGCTCGCTGCCACGACTTCTGTCAATGCTCTTGGGCATGCCCCCTTGGCGCCC
TCTGCGGCTGCCATGGCAGCTGCTCAGGCCATCATGGCTGCGCAGGCACTGCAGGCACAT
GCTGCTCAGGCCAAGGCCGCAGGTGGGACTTCAGGCTCAATAAACAAAGCTGATGAAGCT
GATGCCCTGAAGAGAACAGTTCAAATTAGCAACCTGAGTCCAGTTCTTACTGTGGATTAT
ATTAAGCAGCTATTTGGGTTATGTGGTAAAGTTGTTGATTGTACCACCACAGATTCAAAG
CACATTGCTTATGTCGAGTACTCCAAACCTGAAGAAGCAACTGCAGCGTTGGAGTTCAAT
AGCAAGAATGTTGGTGGTCGTCCATTGAATGTGGAGATGGCTAAATCTCTTCCTCCTAAA
GCAAATAATAACTTGCCCATGATGATGCAGCAAGCCGTTCAGTTGCAACAGATGCAATTC
CAGCAGGCACTAATGATGCAACAGTCAATAGCAACCCAACAGGCTGCTGCACGTGCCGCC
ACCATGAAGTCTGCCACTGAAGCAGCTGCAGCAAGGGCTGCTGAGATAAGCAGGAAGTTG
AAGGCGGAGGGCTTTGGTGGGGACAACATTGAAGGAAAAGATGCCAAAGGGAAGTCAAGG
AATATGCTATAGTCTTCCCTCTTTTTGTGTATAATAGAGGTATCGATGAGATTTGGCATT
TGCTATTTGAAAACTCATCCATCATTCTGAAAGAGATAGATTTAGATTCAAATCATGTGT
TGTCTCTTGGCATATGGTCTGCCATGTATATGTATGTTTTATGTTACATCACAAATTGGG
GAGAGTTTGTGTGTATTCAAGAATGTATCACTGAGTTATGTAAGGGGATACTAAATCTTG
TATTAAAAATTGATATAGCTGTAGACGGAATCAACGTTATGTCC