Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86520
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:9099829:9108904:-1 gene:SORBI_3003G102400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACCGCCTCGCAGACGGCCTCGCCGCGGCATCCCTCTCCGACACGGCGGACCAGAGC
GCCGCCGCCGCCGCCGCAGGTGTGCCTAGCGCCGATTACCTCCGCAGCGTCATGCGCGCC
GTCGAGGGCGCCGAGGCCACCATGCGCAGCCAGATGGAAGAGAATAACCGGCTCAAGGAA
GAGCTGATGAGGAAAACACAACAGTTACAGAGGATGAGGGAAGATGCTACATCCCAAAGT
CCATTGAGTGGATTAGATCAAGAGCGAAATTCTGTTTCTAATAAAATGGATGGCTCCAAC
TCTTCAGTAAATCCTCAAAGTAGCTTGATCCATCGTCAGAATGGAAGTTTTGAAAGTAGG
GAGCCTCTGACTCAGGAAAGCTTGAAACAAAAATACATTGACAGTCCCCAGGCAAATGGA
GCATTTAAAAGATCATTAGGAGAACAGACTGCTGTTGATAGTGGTGGCCCATCACAATTC
TCTACTCCCTCATCTCGGTCCCTTTCTCCAAATAGGCATAAAAAAGATGGAGAATATGAT
TCTAGGTTATTACCAGTTTCAGAGATGAACTCGAACATATCCTGGAAGCAGGACCTTACT
GTTAAGGTCAAAGAAGGGGAAGAAGAGATTGCACAATTAAGAAAGCATCTTGCTGATTAC
TCTGTGAAGGAAGCGCAGATACTCGATGATAAATACAAGTTGGAAAAACGGATTGCTTAT
ATGCGTATGGCATTTGACCAGCAGCAGCAAGATTTGATTGATGCAGCGTCAAAAGCTTTG
TCATACCGGCAAGACATTATTGAGGAAAACATCCGTCTCACATACGCGTTGCAGGCAGCC
CAACAAGAAAGATCAATTTTCATATCTTCTTTGCTCCCCCTTCTATCTGAATATGATGAC
CTCCAGCCTTCAGTTCTCGATGCTCAGTCAATTGTTAGTAATTTAAAGGTTTTGTTTAAG
CATTTGCAGGAGCGACTTATTGTTACCGAGGACAGATTAAGGGAGTCTCGGTACCAGATT
ACTCCATGGCATACTGAATTGTCGCATAATACCAGCAATCCTGTATCTACTGATCCTCCT
GCTGGAAAAGCATTGGTGACTACAAGCAAACACAGCCTTGATATTGTCCCCCAGACAGTG
TATCCTCACATACAATCCCCAATGTCTTCCCCTGTTCAAGCTAGAGGTGATTGGGGTGCA
TTCAGTAACAAAAACCGTCAAGATATTTCAAATGAGGTTCCTACAAGAAGTGCTGGACAT
GATGACATGGGAGGGACCTCTCTTTCAAGCAGAAACCAATATAGGACTGATGTTCCTACT
CAAGTATCTCAAGGTCCTTCCCATGCTGTTCATTTTGACTTTGAGACTCAGAGTCAAGAC
CCACCATTCAAGGGTCTTAGCAGAAATGATGTACTGGATGGTTCAGAGAGTGCTGAAACC
CAAAATACACAAGAACCTTCTACTCAATGGGGTCCAGGGGACTCATCTAATTTGGTATCT
GGCCTTGAGGATGCAAACCCTTCATATCCTTATCTTCCTACAGTTCTTGAGGAGCCTGGT
TCTTCTTTCTCTGAAGCTGCAGAGGATGATCCATTGCCAGGGATAGAAGGGCTTCGAATC
ACAGGTGAACCTTTTCCTGGACGAGAACTTCAAGCAAGTGGATACCCCACCAATGGTACC
ACAACTTGTAATTTTGAGTGGGTGCGCCATTTAGAAGATGGCTCCGTAAATTTCATAGAA
GGAGCAAAGCAGCCTAGCTATGTCGTTACTGCTGATGACGTGGACACTTTACTTGCCATT
GAAGTCCAGCCCCTAGATGATAGGAAAAGAAAGGGAGACTTTATCAAGGTTTATGCTAAC
GACCAGAGAAAAATTTCATGTGTTGATCTGTGTTAA

Peptide Sequence

PEP ID

OQU86520
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:9099829:9108904:-1 gene:SORBI_3003G102400 transcript:OQU86520 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDRLADGLAAASLSDTADQSAAAAAAGVPSADYLRSVMRAVEGAEATMRSQMEENNRLKE
ELMRKTQQLQRMREDATSQSPLSGLDQERNSVSNKMDGSNSSVNPQSSLIHRQNGSFESR
EPLTQESLKQKYIDSPQANGAFKRSLGEQTAVDSGGPSQFSTPSSRSLSPNRHKKDGEYD
SRLLPVSEMNSNISWKQDLTVKVKEGEEEIAQLRKHLADYSVKEAQILDDKYKLEKRIAY
MRMAFDQQQQDLIDAASKALSYRQDIIEENIRLTYALQAAQQERSIFISSLLPLLSEYDD
LQPSVLDAQSIVSNLKVLFKHLQERLIVTEDRLRESRYQITPWHTELSHNTSNPVSTDPP
AGKALVTTSKHSLDIVPQTVYPHIQSPMSSPVQARGDWGAFSNKNRQDISNEVPTRSAGH
DDMGGTSLSSRNQYRTDVPTQVSQGPSHAVHFDFETQSQDPPFKGLSRNDVLDGSESAET
QNTQEPSTQWGPGDSSNLVSGLEDANPSYPYLPTVLEEPGSSFSEAAEDDPLPGIEGLRI
TGEPFPGRELQASGYPTNGTTTCNFEWVRHLEDGSVNFIEGAKQPSYVVTADDVDTLLAI
EVQPLDDRKRKGDFIKVYANDQRKISCVDLC

Transcript Sequence

Transcript ID

OQU86520
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:9099829:9108904:-1 gene:SORBI_3003G102400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACCGCCTCGCAGACGGCCTCGCCGCGGCATCCCTCTCCGACACGGCGGACCAGAGC
GCCGCCGCCGCCGCCGCAGGTGTGCCTAGCGCCGATTACCTCCGCAGCGTCATGCGCGCC
GTCGAGGGCGCCGAGGCCACCATGCGCAGCCAGATGGAAGAGAATAACCGGCTCAAGGAA
GAGCTGATGAGGAAAACACAACAGTTACAGAGGATGAGGGAAGATGCTACATCCCAAAGT
CCATTGAGTGGATTAGATCAAGAGCGAAATTCTGTTTCTAATAAAATGGATGGCTCCAAC
TCTTCAGTAAATCCTCAAAGTAGCTTGATCCATCGTCAGAATGGAAGTTTTGAAAGTAGG
GAGCCTCTGACTCAGGAAAGCTTGAAACAAAAATACATTGACAGTCCCCAGGCAAATGGA
GCATTTAAAAGATCATTAGGAGAACAGACTGCTGTTGATAGTGGTGGCCCATCACAATTC
TCTACTCCCTCATCTCGGTCCCTTTCTCCAAATAGGCATAAAAAAGATGGAGAATATGAT
TCTAGGTTATTACCAGTTTCAGAGATGAACTCGAACATATCCTGGAAGCAGGACCTTACT
GTTAAGGTCAAAGAAGGGGAAGAAGAGATTGCACAATTAAGAAAGCATCTTGCTGATTAC
TCTGTGAAGGAAGCGCAGATACTCGATGATAAATACAAGTTGGAAAAACGGATTGCTTAT
ATGCGTATGGCATTTGACCAGCAGCAGCAAGATTTGATTGATGCAGCGTCAAAAGCTTTG
TCATACCGGCAAGACATTATTGAGGAAAACATCCGTCTCACATACGCGTTGCAGGCAGCC
CAACAAGAAAGATCAATTTTCATATCTTCTTTGCTCCCCCTTCTATCTGAATATGATGAC
CTCCAGCCTTCAGTTCTCGATGCTCAGTCAATTGTTAGTAATTTAAAGGTTTTGTTTAAG
CATTTGCAGGAGCGACTTATTGTTACCGAGGACAGATTAAGGGAGTCTCGGTACCAGATT
ACTCCATGGCATACTGAATTGTCGCATAATACCAGCAATCCTGTATCTACTGATCCTCCT
GCTGGAAAAGCATTGGTGACTACAAGCAAACACAGCCTTGATATTGTCCCCCAGACAGTG
TATCCTCACATACAATCCCCAATGTCTTCCCCTGTTCAAGCTAGAGGTGATTGGGGTGCA
TTCAGTAACAAAAACCGTCAAGATATTTCAAATGAGGTTCCTACAAGAAGTGCTGGACAT
GATGACATGGGAGGGACCTCTCTTTCAAGCAGAAACCAATATAGGACTGATGTTCCTACT
CAAGTATCTCAAGGTCCTTCCCATGCTGTTCATTTTGACTTTGAGACTCAGAGTCAAGAC
CCACCATTCAAGGGTCTTAGCAGAAATGATGTACTGGATGGTTCAGAGAGTGCTGAAACC
CAAAATACACAAGAACCTTCTACTCAATGGGGTCCAGGGGACTCATCTAATTTGGTATCT
GGCCTTGAGGATGCAAACCCTTCATATCCTTATCTTCCTACAGTTCTTGAGGAGCCTGGT
TCTTCTTTCTCTGAAGCTGCAGAGGATGATCCATTGCCAGGGATAGAAGGGCTTCGAATC
ACAGGTGAACCTTTTCCTGGACGAGAACTTCAAGCAAGTGGATACCCCACCAATGGTACC
ACAACTTGTAATTTTGAGTGGGTGCGCCATTTAGAAGATGGCTCCGTAAATTTCATAGAA
GGAGCAAAGCAGCCTAGCTATGTCGTTACTGCTGATGACGTGGACACTTTACTTGCCATT
GAAGTCCAGCCCCTAGATGATAGGAAAAGAAAGGGAGACTTTATCAAGGTTTATGCTAAC
GACCAGAGAAAAATTTCATGTGTTGATCTGTGTTAA