Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86471
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:8254621:8256441:-1 gene:SORBI_3003G095000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATGGCCGCCCCCGCCAAGCATGTCCTGCTGTTCCCGTTTCCCGGTCAGGGCCACCTC
TCCGCGTTCATGTCCCTCGCCGGCCTCCTACACGGCGCTCTCCCCGACGCTGCCATCACC
CTCGTCTCCACCCCGCGCAACGTTGCCGCCCTCCGGACTACCGCGCGCTCCAACTCCAAC
TCGTCGTTCCTCGGTTTCCACCCGCTGCCCTTCACCCCGGCGGACCACGGCCTGCCTCCG
GACTGCGAATCCTCCGACGCCATACAGCCCATGGCCATCTTCGACCTCCTCGAGGCGTTC
GAGGCTCTCGAGGCCGCGTTCGACGACTACCTCTCCGCCGCCGTCGCCGCGGCCGGCGGC
AGTGGCCGCGACGTCTGCGTCGTCTCCGACCCGTTGACGGCGTGGACGGTGACCGTGGCC
CGGCGCCGCGGGTGCGCGCACGCCTTCTTCGCCTCCTGCGGCGCGTACGGTTCCGCCGTC
CTGCACTCGCTCTTTAGCCACCTGCCCGTCCGGCCCGACCCGACCACCGGCCGCGTCCAC
CTGCCCGAGTACCCCGAGGTCGTGATCCACCGCTCGCAGCTCTTCTCGGCCGGCCCGCCC
GCCGTCAGGGAACGCGGCGCGAGGTTCTACGGCCGGCAGGTCCCTCTCGGCTATGAGACG
GACGCGGTGCTCATCAACACCGTGGAGGAGTTCGAGCCCACCGGTCTCGCCATGCTGCGG
CGCACCCTCAAGATCCCGGTCTGCCCCATCGGCCCTCTCGTGCGCGCCACCGGCCTGCCA
GTCTCGACGCCAACGGAGGCGGACGCCGCCATCGTGAGCTTCCTGGACCGGCACCCGCCG
TCGTCGGTGCTGTACATCTCATTCGGTTCTCAGAACTCTATACGAGCAGAGCACATGACG
GAGCTGGCATTGGCCTTAGAGTCAGCCGGCCGGCCGTTCGTCTGGGCTGTCAGGCCGCCG
GTCGGACACGACATCAACGGCGACGACTTCCGGGCCGACCAGTGGCTGCCGGACGAGTTC
GAGGAGAGGGCGCGCACGGGCAACCGAGGTCTCCTTGTACGCGGGTGGGCACCGCAGGTG
AGGATCCTGGCGCACGCGTCGACGGGGGCCTTCCTGAGCCACTGCGGGTGGAACTCGGTG
CTGGAGAGCGTGACGCACGGCGTGCCGATCGTGGGCTGGCCGCTCTCCAGCGAGCAGTTC
TACAACGCCAAGATGCTTGACGAGGAGTGGGGTGTGTGCGTGGAAGTGGCGAGGGGGAAC
GTGGAGGACACTGTGGTAAGCAGCGCTGCGGTCGCCGGCGTGGTGGAGACGGTGATGGGT
CAGACGGCGAAGGCCGCAGAGATGCGGCGGCGGTTGAGGGAGATGAAGGAGGTGATGGAG
GTGTCCTGGAAGGAGGGGAGCGGGTCGTCGAGGAAGGCGATGGAGGATTTCTTGCGGACG
ATGAATCTCCGGTGA

Peptide Sequence

PEP ID

OQU86471
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:8254621:8256441:-1 gene:SORBI_3003G095000 transcript:OQU86471 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MMAAPAKHVLLFPFPGQGHLSAFMSLAGLLHGALPDAAITLVSTPRNVAALRTTARSNSN
SSFLGFHPLPFTPADHGLPPDCESSDAIQPMAIFDLLEAFEALEAAFDDYLSAAVAAAGG
SGRDVCVVSDPLTAWTVTVARRRGCAHAFFASCGAYGSAVLHSLFSHLPVRPDPTTGRVH
LPEYPEVVIHRSQLFSAGPPAVRERGARFYGRQVPLGYETDAVLINTVEEFEPTGLAMLR
RTLKIPVCPIGPLVRATGLPVSTPTEADAAIVSFLDRHPPSSVLYISFGSQNSIRAEHMT
ELALALESAGRPFVWAVRPPVGHDINGDDFRADQWLPDEFEERARTGNRGLLVRGWAPQV
RILAHASTGAFLSHCGWNSVLESVTHGVPIVGWPLSSEQFYNAKMLDEEWGVCVEVARGN
VEDTVVSSAAVAGVVETVMGQTAKAAEMRRRLREMKEVMEVSWKEGSGSSRKAMEDFLRT
MNLR

Transcript Sequence

Transcript ID

OQU86471
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:8254621:8256441:-1 gene:SORBI_3003G095000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATCGCTTCCTTCTTTCAACATTGCGGGAGCTCAAGCCAAAGAGCTAGCTAAGCTAGCTGC
TCCCAAAGACCCAATGATGGCCGCCCCCGCCAAGCATGTCCTGCTGTTCCCGTTTCCCGG
TCAGGGCCACCTCTCCGCGTTCATGTCCCTCGCCGGCCTCCTACACGGCGCTCTCCCCGA
CGCTGCCATCACCCTCGTCTCCACCCCGCGCAACGTTGCCGCCCTCCGGACTACCGCGCG
CTCCAACTCCAACTCGTCGTTCCTCGGTTTCCACCCGCTGCCCTTCACCCCGGCGGACCA
CGGCCTGCCTCCGGACTGCGAATCCTCCGACGCCATACAGCCCATGGCCATCTTCGACCT
CCTCGAGGCGTTCGAGGCTCTCGAGGCCGCGTTCGACGACTACCTCTCCGCCGCCGTCGC
CGCGGCCGGCGGCAGTGGCCGCGACGTCTGCGTCGTCTCCGACCCGTTGACGGCGTGGAC
GGTGACCGTGGCCCGGCGCCGCGGGTGCGCGCACGCCTTCTTCGCCTCCTGCGGCGCGTA
CGGTTCCGCCGTCCTGCACTCGCTCTTTAGCCACCTGCCCGTCCGGCCCGACCCGACCAC
CGGCCGCGTCCACCTGCCCGAGTACCCCGAGGTCGTGATCCACCGCTCGCAGCTCTTCTC
GGCCGGCCCGCCCGCCGTCAGGGAACGCGGCGCGAGGTTCTACGGCCGGCAGGTCCCTCT
CGGCTATGAGACGGACGCGGTGCTCATCAACACCGTGGAGGAGTTCGAGCCCACCGGTCT
CGCCATGCTGCGGCGCACCCTCAAGATCCCGGTCTGCCCCATCGGCCCTCTCGTGCGCGC
CACCGGCCTGCCAGTCTCGACGCCAACGGAGGCGGACGCCGCCATCGTGAGCTTCCTGGA
CCGGCACCCGCCGTCGTCGGTGCTGTACATCTCATTCGGTTCTCAGAACTCTATACGAGC
AGAGCACATGACGGAGCTGGCATTGGCCTTAGAGTCAGCCGGCCGGCCGTTCGTCTGGGC
TGTCAGGCCGCCGGTCGGACACGACATCAACGGCGACGACTTCCGGGCCGACCAGTGGCT
GCCGGACGAGTTCGAGGAGAGGGCGCGCACGGGCAACCGAGGTCTCCTTGTACGCGGGTG
GGCACCGCAGGTGAGGATCCTGGCGCACGCGTCGACGGGGGCCTTCCTGAGCCACTGCGG
GTGGAACTCGGTGCTGGAGAGCGTGACGCACGGCGTGCCGATCGTGGGCTGGCCGCTCTC
CAGCGAGCAGTTCTACAACGCCAAGATGCTTGACGAGGAGTGGGGTGTGTGCGTGGAAGT
GGCGAGGGGGAACGTGGAGGACACTGTGGTAAGCAGCGCTGCGGTCGCCGGCGTGGTGGA
GACGGTGATGGGTCAGACGGCGAAGGCCGCAGAGATGCGGCGGCGGTTGAGGGAGATGAA
GGAGGTGATGGAGGTGTCCTGGAAGGAGGGGAGCGGGTCGTCGAGGAAGGCGATGGAGGA
TTTCTTGCGGACGATGAATCTCCGGTGAAGTGAACAACTTCGTGTATTGCTCGATCTTTA
AACTACTGGAATCTTGTGCGCCATTGCAAATGGTGCTAAATTATGCTCGCCGGCTTCTGC
AAATGTCTAAAGACAGATTGATCTAGCTCTAGGCTATAGGTGTTTACCAATGGTTGCTGA
GCTTCTGTAAAATATAGAAATAAAAGAATATGCTTTTCCTGCAGATCGATTTACAAACCG
CGGCATACATGTTGATCATGTGTCAATTTTCCAAACAATAATGATCATATGTTGGTAGTT
TTTTTAGTGCATGTATTTGTG