Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86449
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:8001022:8006332:1 gene:SORBI_3003G091800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCTTCCCAGCAGCAGCAGAAGAGGGTTCCTGACCAGGACGGCGAGCACGCCAACGGC
GCCAAGAGGTCCAGGGCGCTGGCCATACCCAACGGCGAGGTGAAGCAGGAGCAGCGCGGG
CAGGGAGAAGAAGAGGCAGGCCAAGGCGAGCAGGGAGAGGGAGCTTTGGTTGCGGTGGAG
CAAGCCATGGAGGAGCCGCAGATCAACATCCGGATGGCCGTGTCTCATCTCCACTGCCAT
GCCTGCGTCCTGCCCCTCAAACCCCCAACCTTCGAGTGCGAGGCCGGCCACGTCGTGTGC
CGCGCCTGTCGTGGCAGCCACGTCCAGGCCTGCGCCGGCGCCGGCACCTATGTCTCCTGC
GCCAAGCTGGACGGGATCGTGCGCGACGCCAAGGTGGCGTGCGCCTACGAGGCGTTCGGC
TGCACGAGCTGGGTCGTCTACTACGAGGCGCCGGACCACCACCGCTCCTGCCGGTTCGCG
CCCTGCTCCTGCCCGGCCCCTGGCTGTGGGCACTTCACCTCGCCGGCGAGGCTGGTCGAG
CACTTCTTCAGCCACCACGCCTGGAACGTCACCGAGGTCGACTACGCGAAGCCGTGCAAG
CTCGCCGTCCCGGGCCCCGAGGACAAGCTGGTCCTGGTGGGCAAGGCGGACGGGTCCGTG
TTCCTCGTGTCTCCGTGCGCCTTCGGCGCGGCCACGGCGGCCGTGTCGCTGGTGTGCGTG
AGGGCGTGCGGCGACGTGGCTGCGGGGGCACCCCAGTACACGTGTAACCTCTGGGCGGAG
GTCGCGGGCAACGCCCTGCTGCTCACGTCTGTGGTGGCCAGCAGCGACCTGGTTGGCGGC
TTCCCAGCGACCGACAAGGTCATGTTCCTGCCACTGCCGCAGCTGCTGTACGACGAGTCC
GGCGAGCCGCCTGCCCTCATGGTCCGCATCGACAAAGTCGGCGCGTCCACTATCAGGTCA
AGGTCCCCGTGTGCCACTCCGCCGTCGAGCCTGCCCAGGAGGATGCTGCAGTAA

Peptide Sequence

PEP ID

OQU86449
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:8001022:8006332:1 gene:SORBI_3003G091800 transcript:OQU86449 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSSQQQQKRVPDQDGEHANGAKRSRALAIPNGEVKQEQRGQGEEEAGQGEQGEGALVAVE
QAMEEPQINIRMAVSHLHCHACVLPLKPPTFECEAGHVVCRACRGSHVQACAGAGTYVSC
AKLDGIVRDAKVACAYEAFGCTSWVVYYEAPDHHRSCRFAPCSCPAPGCGHFTSPARLVE
HFFSHHAWNVTEVDYAKPCKLAVPGPEDKLVLVGKADGSVFLVSPCAFGAATAAVSLVCV
RACGDVAAGAPQYTCNLWAEVAGNALLLTSVVASSDLVGGFPATDKVMFLPLPQLLYDES
GEPPALMVRIDKVGASTIRSRSPCATPPSSLPRRMLQ

Transcript Sequence

Transcript ID

OQU86449
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:8001022:8006332:1 gene:SORBI_3003G091800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACCACCGAAGGAAAAAAAAACACTTTTGCTCTCCTGTCCCCTCGGCCATGTCTTCCCAGC
AGCAGCAGAAGAGGGTTCCTGACCAGGACGGCGAGCACGCCAACGGCGCCAAGAGGTCCA
GGGCGCTGGCCATACCCAACGGCGAGGTGAAGCAGGAGCAGCGCGGGCAGGGAGAAGAAG
AGGCAGGCCAAGGCGAGCAGGGAGAGGGAGCTTTGGTTGCGGTGGAGCAAGCCATGGAGG
AGCCGCAGATCAACATCCGGATGGCCGTGTCTCATCTCCACTGCCATGCCTGCGTCCTGC
CCCTCAAACCCCCAACCTTCGAGTGCGAGGCCGGCCACGTCGTGTGCCGCGCCTGTCGTG
GCAGCCACGTCCAGGCCTGCGCCGGCGCCGGCACCTATGTCTCCTGCGCCAAGCTGGACG
GGATCGTGCGCGACGCCAAGGTGGCGTGCGCCTACGAGGCGTTCGGCTGCACGAGCTGGG
TCGTCTACTACGAGGCGCCGGACCACCACCGCTCCTGCCGGTTCGCGCCCTGCTCCTGCC
CGGCCCCTGGCTGTGGGCACTTCACCTCGCCGGCGAGGCTGGTCGAGCACTTCTTCAGCC
ACCACGCCTGGAACGTCACCGAGGTCGACTACGCGAAGCCGTGCAAGCTCGCCGTCCCGG
GCCCCGAGGACAAGCTGGTCCTGGTGGGCAAGGCGGACGGGTCCGTGTTCCTCGTGTCTC
CGTGCGCCTTCGGCGCGGCCACGGCGGCCGTGTCGCTGGTGTGCGTGAGGGCGTGCGGCG
ACGTGGCTGCGGGGGCACCCCAGTACACGTGTAACCTCTGGGCGGAGGTCGCGGGCAACG
CCCTGCTGCTCACGTCTGTGGTGGCCAGCAGCGACCTGGTTGGCGGCTTCCCAGCGACCG
ACAAGGTCATGTTCCTGCCACTGCCGCAGCTGCTGTACGACGAGTCCGGCGAGCCGCCTG
CCCTCATGGTCCGCATCGACAAAGTCGGCGCGTCCACTATCAGGTCAAGGTCCCCGTGTG
CCACTCCGCCGTCGAGCCTGCCCAGGAGGATGCTGCAGTAATGAGGATCGGAAACTAGGC
ACTAATTAATTAGCTTGGTTAGCAGTAATGCATACTCCTTCAATTTTGCAGAGTGTTCGT
AGTAGCTGCCTAGCTGGATGTGGTGGACTGGTGGTTAGTGGTGAGGATCATCAGAATGAC
AAGAGCATGGATTAGTGTGTTCGTGGTAGCTGGATGTGGTGGTTAGTGGTGAGGTTCATC
AGAATGTCAAGAGCATGGATTAGAGTTTAGTACTACTAGTTCTCAGCATTTTACTTGGTG
TCTAATTCTAGTTTGGTACTTGAATGCAAGTAGCTCTACTTATTTATGCAACCTATAATT
CCTCCAAGATTTGTTCCTTCACAGTTCGTATTTTGACATCAAGTGAACTATGATCAAAAT
TCAAAAGGGTAATGGCAATATCAGACAATTAGACATCTTGTAATCTGTGTGCAAATAGAT
TGGGATCATCTGTGCAAGGACAGGGGCGCTGGAGACAGGTTGTACATTGTAGTCTTGCTG
GCACTGCAAGTCTTTGCAATGGCTCTATTATCTTCACCTGGCCCTGGCTGTTGATCATGA
GATGTATGGCTGGCCAGCGTCACTGTGTCAGTGATGCCTTGCCTTTGAGATGTATTGTAG
GCAGTAGGCCCGTATCCTGTTGTCTCGTGCCGAGTTCAGAGTTCTTCTGCAGCCATGTCT
CATTGGTTTGAAATTTCTACCTCTGTCGACAAAAGAAATTTCTATCAGGTTCAAATCTTG
TGTATTTCCCTTTTTTATTAGTGATTGATGGATGCTGTGGACTGAATCTTTTGTTGTTTG
GTAGAAGTACTGCTCTGTGAAACTGATCAATACATTAATTAGTTTTGTGAAATTGATGAT
AGAGGAAGACTTTGTCACTCTTACTTGTTACAAGCTATATTTCAATTTGCTGAACATGGT
TTATCGAAAAAAATGCAGTGTGTTTTATTAAAACAAACTCTGTAGGTACAGGTAATACTT
TTTTTTGCAATATTTGCAGAATAGCTGTGAAGTGCATAATATCAGCCGGGTGAGGTCATG
ATTAATGCAGATTATATTCTATTCTATTTTTATAATTCATTTTCATAAATTACCTATCAT
GCACATAATGGCTTGCTGATGGTATCTAAGACACTAAGACTAAGAAGAATTTCCTCTGCT
TAGTGCTGGTTGTAACTGCATATTTTACTATTTGAGTAGTCTTTCCAGTGAGTTTCCTGT
TCAGTTCCTTTTACACATAGCTTGTTATTCCGTCAGTTTTCTGGGCAAACTTTTTGCTTG
CGATCAGCATCGGACTGGCCCTTCTTTTAACTGCTAGACAAGCTAAAGAAACCAAAGAGA
ATTGGAAGACAACATACAGGATGTTGTATTGATTAATACTAATTAAATATGCTGTAGCAC
CAGTCATATGACAACGGATTGTTCTCTTGTACATCTGAAAAATGAATAATGGTCGGTTTG
CTCATTGCAGCAACCTCATAAATAGTTGCTCCTAAAACATGCTATTTTGGCTATTAAGAT
AGACAAGCTGTTAAACTCCTGTGTTGTCTTGATTGGTGTGTGTCTGGATTATTTGGATTG
TCAATCTTCAGCTGTAGTTCTTGGAGACGTGTCAGTTTGTATTTGTAAGTGTCTTTGAAT
AATTATCCTATATATTCTGAAATGTAGAGTGTCTTCGAATAAATGCCCTATTTCTTGATG
TTGGATTTTTTTCGTTGCCAGTAGTAGTACTAATTACTAAAGGATATTGCTCAGGTTTTT
GAATAATTACTAAGAACTCTGTTTTTTAACTTTCCAGGTTAGAAGAAAGAAGATGCAAGA
AGGAGAAGCTGCAAATTGCAAGAGTCAACACCACAGCTCTTTTTCTGAAAAAAAATATAT
TTAACAGAAGAGGAAATGGCTAAGCACATCAATCCATATGTCATGCTCATATATGCACTG
TCCAAGTTAATACTAGTATCTGTTGTATCTAGGAGTAGTACTGTCTACTTATGTATGCTG
ATCAATCAAGAGCTTATACTCAGTTATTGGGTGTTATGTTATTGAGTTTTTATATGCTGA
CCCCTTCTTGTTATGCTCTGTTATTGAGTGTTATGTGCTATCATAATGTACACTCAATTA
CTCATATATTTGGTTTAAAGCAAATAATATCCATGTTAACAATTTGGCTTTTTCCTTCTA
CCTCTAGGCTTTTTTCCCATCCTCTTCCTTTATGCCAATTCTTTTTAGCATTACAATAGT
TTGGTTCCTCCTTATGTGCCATTTCCACCTAGCAAATACTAGTAGCCTTGTTGTAGAGAG
TATAGCGTATAGCTTGCAGAATCCTCATACAGGATCTTGAGTTGTTTTTCAGTTCTCTGA
AAATTTGAAAATTTTTTGGTTTCAGAGAACTGGAGACTACATAATTTTATGTACTGCATG
CTGAAATAAAGCCATATACTGACATACTAGGAAGCAATTTGCCTTGTGATTTGTGAGGGC
TGTGATGTGACGCATTTTTTGTCCTTTCTAAATTGTTGGGAGTCAAACTCGACAATAATC
TGATAGTATCAATGAATTCAGTAGTTGTCTTCATTTACACTGCTTTGTTAGGTGAGCATT
ACCAGTGATTACATTAGTGATAGCTAGTTTCTTTTTCTTGTTTACAATAATCTTGCATAC
TGTTATAATTGCTCGATCTATCATACTGATTCCTGTCTCCTGGTTGGTGATTGAGCTCTT
GGTCGGCAGGTACTTCTCCCCTACAGCAGTAGCGGATAAAATCACTTGAAGTGAGCATCT
TCCTCCACATATCCACTGATCTTATGCATTTATTAGTTATATTACCTTTGATTTCTGGTA
AATTGTTGGTCTTGCTCGCCTTGTTACCATAATTATTTTGGTTGCCCAGCCATGGAAGTA
GAATAAATCTGGGAGCAATGGGTAATCTTCAAATTATCCGTTGAAATTGTTCTGTTCTTT
CTGTGATGGCAAGGATGCATATTGGGGAAAAAATGATATATGGCATTATATAAACTGAAC
CTTTATAGTTGCTGCAATAGCCCGTGCATATGTTCTCTGGCTTGCTTTGGCTGGAGCAAT
TTATGAGTGATGTTTCTGTAGCTGGCTTGTTTGCCGTGTGGACACAACACAGAGATGTCG
TTCTGCTTAGTAATCTTGGCAATTCTTCTCTCCCTCCTACCTCTATAGAAAAGATTAACA
AAAAAAGTCCCTTTGATTGTTCACAGAATCCTAGTTTGTCCAATGTCCATTAGATATTTC
TTTTGGCTGCTTCTGTTATGCAGGATACAAAATCTTAGGCTTGTGAATTTGTGATGGATG
ATTCAGATCAGATACTATACTTCTGGACTGATATCTCTGAACTGAAACAAGTAACCTGGT
AAGCCTGTGACAATTTGTTGTAACGATTTTTTTGGTGGTTTGTAATAAAGACGGTTAAGA
GTTAACTTTAATTTATGTTTGCTTTGCAGCAGATACATGGAGATGAGGTTTTGAATTGTC
GTCTGACAGAAGGAAACAAGGTTGCAATTTATGCTACTGTTAGATTCTAAGACAAACGAA
GATGGATATTTAACTTTGGCCATGAGCATACTTGTTTGCAACTTTTAAGTAATCTGTTAA
ATTGATCGTGTAGAGTTTTCTTATTAGCTATTGAAATGCACTCATACAAACAGTACTATG
TTCATGTATGGACAAGTTTTTTTTTAAAAAAAAAAACAGATTTTTCAGAATTCAGAGTTA
GTACTATGTTCATGTATCAGAGTGTCAAGAGATGGATTAGAGTTAAGTACTGCTAGTTCT
CAGCATTTTACTTGGTGTCTGTAATTCCTCCAAGATTTGTGCTCCTGTGAAATTGGTTCG
TGCTTTCTTGACGAGCCTTCAGAGTTGGTACTTTGATATCAAGTGTACTATGATCAAAAT
TCAAAGAAGGGTGATGGCAATATCAGA