Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86272
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:5415096:5419087:1 gene:SORBI_3003G061900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTCGGAATAACCAGGGTCATCTCCAGCTGCCAGAGATGGATCATATTCAACCCAAG
AACATCCCACACAATGAATCACTGCCTCTAGGCCAGAAGCTTCTACTGCATCATGGAAGT
GATGCGCCCCTTAGAATTGGTCATTCTACTCATGGGAATATGGGACATAGAATAAATGAT
CTTCCATCTTCAAGTCGCACTGTGCAAACTCTAGGTTATAGAGTTGGGAACCCAGGAACC
TCACACGCTCCCTTTGTTCACTACCATGCTGGAAGTTCCAGTAGCCATTTACCAGCAGAA
CCTGCTGTGGATTATCTACATAGGTCTGAGGAAGGCTTTGCTCCAGTGGGTTCCCATATA
GACAACAGAAGGGCTGCAATGAAGCGAAAAGATCCCAGTGTACACCCTGCGGGGATCAGT
GCTACTGGTTATTATGTTGGAAGTTGTTCCAATACTCAGCCATCTAACTTTGTGCAGCCA
AATCCTGCTCCACTTGCTGAGCCCTTGCTTCATCAAATACCTTTAAGCATTGACCAAAGT
GGTTGGGATGGCCAACACTTAATTCATCAAGAAGGATTCCAGAGGAATGTGAGAGCACGC
CACAGTCATAATATTTCATTAGAACCCAGATCAGCTTCAACCTACCCACTAAACAGTGCT
CACATGTCGTCATTTGGTTCAACTGCAAGTGCTTCCTCAAGTACATCAGTCGAAAGGAAC
CAAGCACCTGTTTCTCTGCCAACAAGAACTGTTCCATCAGGTGCACCAGGTATCACTAGC
AGGGCCCTGACAGGGAGGGCCTACTATCCTGTGGTTGGAAGCAGCAGCCCAAGTGTTGGT
GCTGTCCCAACTATCCATGGATCATCTGGCACTGCAATATTTGCTAATGGTGGCTATGCT
CCTAGTACTGCTCATACTGGAACTGTTCCTATCTACCCTAATGGAGCTCCTGCTACTTCA
TCTGGCTCTAGAGCCATGCCCCATCAGATGGTCATTCAGAATCATCCACATGCTACCTCT
GCAGCAACCTCTACATCCATGCGTGACAGAATTGCTGCGGCTTCTAGACATGCAAGACAT
GTATCAGTAGGGCATGCTAACAATGGAAGGTACAGAAGGGCTAGGAGCTCTTACTACAGT
CTTCATCCATTGATGGTAGAGGCAGAGCGGTTCATGATGGACCAGTTAGTCTTTTACGAA
TCAAGAGCAGCAGCTGCTGACCCCCACAGGGACATGAGACTGGACATTGACAACATGAGT
TATGAGGACCTGTTGGCTTTGGGAGAATCTATGGGTAACGTCAGCACAGGCTTGGCTGAT
GAAAAAATTTCGAAGTGTGTGAAAGAAGTGGTCTGTTGCAGTTCTGGCCAGATGCAAATT
GATGAAGATGACCAAGATGATGGAAGCTGCATCATTTGCCTGGAGGGTTACAAAGACAAG
GATATGCTGGGGATACTGAAATGCAGGCATGACTTCCATGCCGACTGCATCAAGAAGTGG
TTGCAGACGAAGAATTCATGCCCGGTGTGCAAAGCAGCCGCTGCTTAG

Peptide Sequence

PEP ID

OQU86272
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:5415096:5419087:1 gene:SORBI_3003G061900 transcript:OQU86272 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MARNNQGHLQLPEMDHIQPKNIPHNESLPLGQKLLLHHGSDAPLRIGHSTHGNMGHRIND
LPSSSRTVQTLGYRVGNPGTSHAPFVHYHAGSSSSHLPAEPAVDYLHRSEEGFAPVGSHI
DNRRAAMKRKDPSVHPAGISATGYYVGSCSNTQPSNFVQPNPAPLAEPLLHQIPLSIDQS
GWDGQHLIHQEGFQRNVRARHSHNISLEPRSASTYPLNSAHMSSFGSTASASSSTSVERN
QAPVSLPTRTVPSGAPGITSRALTGRAYYPVVGSSSPSVGAVPTIHGSSGTAIFANGGYA
PSTAHTGTVPIYPNGAPATSSGSRAMPHQMVIQNHPHATSAATSTSMRDRIAAASRHARH
VSVGHANNGRYRRARSSYYSLHPLMVEAERFMMDQLVFYESRAAAADPHRDMRLDIDNMS
YEDLLALGESMGNVSTGLADEKISKCVKEVVCCSSGQMQIDEDDQDDGSCIICLEGYKDK
DMLGILKCRHDFHADCIKKWLQTKNSCPVCKAAAA

Transcript Sequence

Transcript ID

OQU86272
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:5415096:5419087:1 gene:SORBI_3003G061900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAGTACATTTGCTGCCTTATCACCTTCGTTCTAACCTATTTTTGTATTTTGTTTATAGTG
TAAACATGAATCTGACATTATCATTTGTAGGATGATGTTAGGCTGTTGTGAATATTGGTA
AGTCAGAGTGATTATTTAGTATATCCTTCAACACTTTTTTGGTTATGAACTTGATCATGC
ATAGGGAAGGTGTTTCTAACCTCTCAGTTATGTAGAACTGGAAAGCAAGAGCTGATACAC
GAGAAAAACTGCAGCTTGCCTCCAGTTTTGCGTGCTGATTCTGATTAATATTTGCAAGAT
GAACCTTATCCGAAAGAAATCCAAGCTACTTATCTGTTCAATTTGGAGTGGGGTGGATTT
ACCAATGAGCAGAGGAAGGGCAGAAGCGCACCCGCCAAGAATTTTAGGAATGACATAGTT
TGGGGCCTCTGGGCATGTATTGCTTGGAGCATTTCTTCTTTCATTTCCATCTGCCTTTTC
TGTTCTTTGTATATTTTGTTTCTTTTGTGCTATGTATAGTAAAATTAATTTTATTTGATT
TGTTAATAAGAATGTATGAAAAGTTTGGAAGGAATAATGTGATATACAATGTGGTTGTAA
ATCTATTTTATATGAGTGCCTATTTGTATATAAAAAATGGTTATTTTTTTCTAGTTTCTG
GAGCCTTTATGGTACACTTGAAATTCTACTTGACATTATCACAGGTCATTTTGCGTTGTT
AGGTTCCATGTAGCTGACTTTTGATAATTTCCCTTGTCAGTTTGTATCTAGTACTATCGT
TGTGGGAGATAAGGACACTTTCAAGTGCCAATATCTGTATTCCGTAGTGTATTTACCAGC
AGTTTACCTGTCAAGGGATGTATACCTTATAGCGCATTTGCTTGTCAATCAAGGAAGAAT
AATTTGGACTGCATATATTTCACAATGTAAATATCTCATAAAAATAGTGTTTCTTCCATA
TGTTTTGTGTGACTTTTCAGTTGTATGAATTGATTGAAATTCTGAATCCTTGTGTTGTTT
CATCTTGCTGTCCATCGATGTGTTCATTCAGAAATGTGTTTTTCTATCCATGTATATTGA
ATATGGAATGCACTTTAATGATTTTGGTACTTTTTTTTGTGATATCTTAGGCACACAATA
TATGTAGTGCCGCATTGGTGACATAGCAATATTGGTGACCTAGCAATATCTTAGGCACAT
AATATCATGGCAATTTATGCTTTCATTTGGGTCTTTAACTCTTAATGTTATGTGATGCTG
GATTATTGATATCGATTTTGTTTTCCATTTCCAGATTATTAAGGGCTGGCGCACCTGACT
TCTTGTTTTATGGCTCGGAATAACCAGGGTCATCTCCAGCTGCCAGAGATGGATCATATT
CAACCCAAGAACATCCCACACAATGAATCACTGCCTCTAGGCCAGAAGCTTCTACTGCAT
CATGGAAGTGATGCGCCCCTTAGAATTGGTCATTCTACTCATGGGAATATGGGACATAGA
ATAAATGATCTTCCATCTTCAAGTCGCACTGTGCAAACTCTAGGTTATAGAGTTGGGAAC
CCAGGAACCTCACACGCTCCCTTTGTTCACTACCATGCTGGAAGTTCCAGTAGCCATTTA
CCAGCAGAACCTGCTGTGGATTATCTACATAGGTCTGAGGAAGGCTTTGCTCCAGTGGGT
TCCCATATAGACAACAGAAGGGCTGCAATGAAGCGAAAAGATCCCAGTGTACACCCTGCG
GGGATCAGTGCTACTGGTTATTATGTTGGAAGTTGTTCCAATACTCAGCCATCTAACTTT
GTGCAGCCAAATCCTGCTCCACTTGCTGAGCCCTTGCTTCATCAAATACCTTTAAGCATT
GACCAAAGTGGTTGGGATGGCCAACACTTAATTCATCAAGAAGGATTCCAGAGGAATGTG
AGAGCACGCCACAGTCATAATATTTCATTAGAACCCAGATCAGCTTCAACCTACCCACTA
AACAGTGCTCACATGTCGTCATTTGGTTCAACTGCAAGTGCTTCCTCAAGTACATCAGTC
GAAAGGAACCAAGCACCTGTTTCTCTGCCAACAAGAACTGTTCCATCAGGTGCACCAGGT
ATCACTAGCAGGGCCCTGACAGGGAGGGCCTACTATCCTGTGGTTGGAAGCAGCAGCCCA
AGTGTTGGTGCTGTCCCAACTATCCATGGATCATCTGGCACTGCAATATTTGCTAATGGT
GGCTATGCTCCTAGTACTGCTCATACTGGAACTGTTCCTATCTACCCTAATGGAGCTCCT
GCTACTTCATCTGGCTCTAGAGCCATGCCCCATCAGATGGTCATTCAGAATCATCCACAT
GCTACCTCTGCAGCAACCTCTACATCCATGCGTGACAGAATTGCTGCGGCTTCTAGACAT
GCAAGACATGTATCAGTAGGGCATGCTAACAATGGAAGGTACAGAAGGGCTAGGAGCTCT
TACTACAGTCTTCATCCATTGATGGTAGAGGCAGAGCGGTTCATGATGGACCAGTTAGTC
TTTTACGAATCAAGAGCAGCAGCTGCTGACCCCCACAGGGACATGAGACTGGACATTGAC
AACATGAGTTATGAGGACCTGTTGGCTTTGGGAGAATCTATGGGTAACGTCAGCACAGGC
TTGGCTGATGAAAAAATTTCGAAGTGTGTGAAAGAAGTGGTCTGTTGCAGTTCTGGCCAG
ATGCAAATTGATGAAGATGACCAAGATGATGGAAGCTGCATCATTTGCCTGGAGGGTTAC
AAAGACAAGGATATGCTGGGGATACTGAAATGCAGGCATGACTTCCATGCCGACTGCATC
AAGAAGTGGTTGCAGACGAAGAATTCATGCCCGGTGTGCAAAGCAGCCGCTGCTTAGGAC
AACACCAGAGGAGCAAAGCAACTATTGTGCTCCTCGATCCATTCATTTTAGGCTCAGATT
AAATTATGCCATTTCATTCTTTTCGTCCTGGCAGCCATGTAAATAAATGCTCTATGGTGA
TTAATTAGTTATCTCTTGGGTTACATTAGCCTGAATTCTTTTGTTGTATTGTAACAGTCT
AGTTGTGAAAGCAACTAATCATCAATCAAGTGGTTAAAAGCTCATGTCCTGGTTTTCGGA
TTCTCCGACACTTGAAATCAGTTGCGAGGTACTTCTCTGGTGCCAGCCTTACCTAGGTGA
AGTTGCAATTGATGGTGGAGTTGCTTAGGGGCAACCATTGGTGCTTGGTAACTTCGGATT
GAAGGTGTTTTTTCCCCTAAGAGTTCCATTGATTAGAAGCATTAGAAGCATCTTACATGG
ATTACGATGTCGTATGCTGAAGTGAACATCTGCAGTTGGTTGCTACATGAGAAAATAACG
GAGAGATTTAGAG