Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86265
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:5323818:5329189:-1 gene:SORBI_3003G060300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACTATGGACCCTGCTCCGGCGGCGAACGGCGCCGCGGCCGTAGCCGGAGGAGGCATG
AAGCGGCAGGGCGGTAGATGGTGGTACGCGGCGGCCGGTGCCCTCATTGTGGCGCTCCTC
GCCGTGGCCGTGAGCTTTTACAGCTTCCGGGGCATCCCCTCCTCTCCACCAGGAGGCTGC
GGCTGCCCTGCTGCAAGGAAGTACACCGGAATGGTGGAGGACTGCTGCTGCGACTATGAG
ACGGTGGACGCCATCAATGAGGAGGTTCTGCATCCGATCCTACAGGAACTTGTTAAGTTG
CCGTTCTTCAGGTACTTCAAGGTTAAATTGTGGTGTGATTGCCCTTTTTGGCCTGATGAT
GGAATGTGCAAGCTTAGAGATTGTAGTGTCTGTGAGTGCCCAGAGAATGAGATCCCTGAA
CCATTCAAGAAACCTTACAGTGGACTTTCTCCAGATAGTATGATATGCCAAGAAGGAAAA
CCACAGGCTACCATTGATAAAACCCTTGACAGCAAGGTTTTCAAAATATGGGTTGAAACT
GACAATCCGTGGACATCTGATGACGAGGCTGATAGTAAAGAGATGGCTTACGTGAATCTT
CAACTGAATCCTGAACGATACACTGGCTATACTGGTGATTCAGCAAGAAGGATATGGGAT
GCTATTTACAAAGAGAACTGTCCAAAATATCCCTCTGAAGAACTGTGCCATGAGAAGAAG
GCATTGTACAAGCTTATTTCAGGGTTGCACTCCTCAATTTCAGTGCATATTGCTTACGAT
TATCTTCTTGATGAATCTACTAACTCAGCAGCAGATTATCTCGAGCAAGCTGATTACAAT
ACTGGTAATCCTGAAGATGACTGGAAAACACGATCTCTTGTGAAGCAATTGCTTTACAAT
TCAAAGTTAAGATCTGCATGTCCATTGCCTTTTGATGAAGCCAAACTCTGGCAAGGTGAA
AATGGTCCTGAACTAAAGCAAGAGATTCAGAAGCAATTTAGAAACATTAGCGCAATTATG
GACTGCATTGGGTGCGAGAAGTGCCGGCTGTGGGGAAAGCTCCAAGTTCTTGGTCTTGGA
ACTGCACTGAAAATTCTTTTCTCTGTCAATGGAGACAGCCATTTGAATCAGCCATTGCAG
CTTCAGCGAAATGAGGTCATTGCATTGTTCAATCTTCTGAATAGGCTCTCAGAGTCTGTC
AAATTTGTACATGAAAAAGGATCGTCAATTGAAGAAGTCATCAAGGAACAGAGCCCTTCA
ACCCTTCAAAAGGGTGGTTCTAAGCCGAATGTTAAACTGGACTTTCTCTGA

Peptide Sequence

PEP ID

OQU86265
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:5323818:5329189:-1 gene:SORBI_3003G060300 transcript:OQU86265 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTMDPAPAANGAAAVAGGGMKRQGGRWWYAAAGALIVALLAVAVSFYSFRGIPSSPPGGC
GCPAARKYTGMVEDCCCDYETVDAINEEVLHPILQELVKLPFFRYFKVKLWCDCPFWPDD
GMCKLRDCSVCECPENEIPEPFKKPYSGLSPDSMICQEGKPQATIDKTLDSKVFKIWVET
DNPWTSDDEADSKEMAYVNLQLNPERYTGYTGDSARRIWDAIYKENCPKYPSEELCHEKK
ALYKLISGLHSSISVHIAYDYLLDESTNSAADYLEQADYNTGNPEDDWKTRSLVKQLLYN
SKLRSACPLPFDEAKLWQGENGPELKQEIQKQFRNISAIMDCIGCEKCRLWGKLQVLGLG
TALKILFSVNGDSHLNQPLQLQRNEVIALFNLLNRLSESVKFVHEKGSSIEEVIKEQSPS
TLQKGGSKPNVKLDFL

Transcript Sequence

Transcript ID

OQU86265
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:5323818:5329189:-1 gene:SORBI_3003G060300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCGTCTCCACGCTAGACGACCGCCATTGCTTGTCCCTTCGAGTCATCTGAGATCTCTTCC
GGAAGACTGGAAGCTTCCGCGCTGGCGCGGACGCGCGGTGATGACTATGGACCCTGCTCC
GGCGGCGAACGGCGCCGCGGCCGTAGCCGGAGGAGGCATGAAGCGGCAGGGCGGTAGATG
GTGGTACGCGGCGGCCGGTGCCCTCATTGTGGCGCTCCTCGCCGTGGCCGTGAGCTTTTA
CAGCTTCCGGGGCATCCCCTCCTCTCCACCAGGAGGCTGCGGCTGCCCTGCTGCAAGGAA
GTACACCGGAATGGTGGAGGACTGCTGCTGCGACTATGAGACGGTGGACGCCATCAATGA
GGAGGTTCTGCATCCGATCCTACAGGAACTTGTTAAGTTGCCGTTCTTCAGGTACTTCAA
GGTTAAATTGTGGTGTGATTGCCCTTTTTGGCCTGATGATGGAATGTGCAAGCTTAGAGA
TTGTAGTGTCTGTGAGTGCCCAGAGAATGAGATCCCTGAACCATTCAAGAAACCTTACAG
TGGACTTTCTCCAGATAGTATGATATGCCAAGAAGGAAAACCACAGGCTACCATTGATAA
AACCCTTGACAGCAAGGTTTTCAAAATATGGGTTGAAACTGACAATCCGTGGACATCTGA
TGACGAGGCTGATAGTAAAGAGATGGCTTACGTGAATCTTCAACTGAATCCTGAACGATA
CACTGGCTATACTGGTGATTCAGCAAGAAGGATATGGGATGCTATTTACAAAGAGAACTG
TCCAAAATATCCCTCTGAAGAACTGTGCCATGAGAAGAAGGCATTGTACAAGCTTATTTC
AGGGTTGCACTCCTCAATTTCAGTGCATATTGCTTACGATTATCTTCTTGATGAATCTAC
TAACTCAGCAGCAGATTATCTCGAGCAAGCTGATTACAATACTGGTAATCCTGAAGATGA
CTGGAAAACACGATCTCTTGTGAAGCAATTGCTTTACAATTCAAAGTTAAGATCTGCATG
TCCATTGCCTTTTGATGAAGCCAAACTCTGGCAAGGTGAAAATGGTCCTGAACTAAAGCA
AGAGATTCAGAAGCAATTTAGAAACATTAGCGCAATTATGGACTGCATTGGGTGCGAGAA
GTGCCGGCTGTGGGGAAAGCTCCAAGTTCTTGGTCTTGGAACTGCACTGAAAATTCTTTT
CTCTGTCAATGGAGACAGCCATTTGAATCAGCCATTGCAGCTTCAGCGAAATGAGGTCAT
TGCATTGTTCAATCTTCTGAATAGGCTCTCAGAGTCTGTCAAATTTGTACATGAAAAAGG
ATCGTCAATTGAAGAAGTCATCAAGGAACAGAGCCCTTCAACCCTTCAAAAGGGTGGTTC
TAAGCCGAATGTTAAACTGGACTTTCTCTGAGATGTAAGAGTGTAATCTGTAGTTACACG
GACATGCCGGTAGATTAACATATAATGTACAGATGTACTGAAAGGTTAACATGAGATGGA
AGCTGTTTCCAGGGGCTGCAGCTCGTGTTACCTGTTGTAGCTAACTCTACCCAAAATGTA
AATTAGTCTTAGATTATCCAGGGGTGGCTAGGACCTCTCTTCGGTGAGCTCCTGGCAAAT
CAGGGGATGGCGTTCCTTGCGCCAAACTTGTACAGAATTTTCTCAAGCTTATAAATGAAA
GCCGGTAACGGATCTTTCGAAAAAAAAATACTTCAAGAGAATGAGAGATACAGACTCTTT
CGAGCTAAATGCAATGACAGAGCTAACCTAGTTTTTTTCCCCTTCCTTTCATTTTGGTGG
GTTCCGGCCCTTAATTTTTTTTCCATAAGTGATTAAGTGTCCCTCCGTTGTAAAGGATCT
CACCGTC