Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86241
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:4873447:4878173:-1 gene:SORBI_3003G053800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGCTCCCAAGTCTCCACATCACGGGGTCTTCACCCCCCGGGCAAGCTTGGGACATTT
GAGTCGCCCCATGCCTGGCCGCTGCCAGCGCCTACAGCCCAGCCCGAAGCGGGCCGTGGT
GATGATCAGGAGGTCAGGCTGTTGTCGGTTGCCTGGAACCAGGATTGTGGATGCTTTGCT
GCTGGTACCAGCAACGGGTTCAGGATCTTTAACTGCGAACCTTTCAAGGAGACTTTCAGG
AGGGACCTTAAGAGCGGCGGGTTCGGGATTGTCGAGATGCTGTTCCGTTGCAACATCCTT
GCTCTTGTAGGCGGCGGCTCCAATGTGCAGTACCCGCCGAACAAGGTGATGATCTGGGAT
GACCACCAGAGCCGTTGCATTGGAGAGTTCGCCTTTCGCTCTGATGTCCGGGCGGTAAAA
TTAGCAAAGGACTACATCGTGATTGTCCTCGAGCGCAAGATATTCGTTTACAACTTCACC
GATTTGAAGCTGCTCTACCAGATTGACACCCTGTCAAATCCCAAGGGACTTTGCTGCCTC
TCTCATCATTCCAATACTTCAGTTTTGGCCTGCCCTGGGGTGCACCAGGGGCACGTTCGC
GTGGAGCATTTCGGGCTGAAGATGGCGAAGACAATCCCAGCTCATGATTCACACATCTCT
TGCATGTCACTGACAATGGATGGTCTTCTACTGGCAACCGCAAGCTCGAAGGGCACTTTG
ATCAGAATATTCAACACAATGGATGGCACTCGCCTACAAGAGGTACGCAGAGGTCTTGAC
AAAGCAGAAATATATAGCATTGCGTTGTCACCAAATGTGCAGTGGTTGGCAGTGTCCAGC
GACAAAGGGACTGTTCATATTTTCTCCCTGAGAGTCAGAGTTGCTGGGGAGGATGCAAGC
AGTGAGCAACGCGCTCTTGAAGGTCCACGGATGGATCACCAGAATTCTTCAAGTTCTATC
GATCCTCTTATTCAGGCGAACACTGGATCCAATGCGAGTTCATCACTGTCTTTTATGAGA
GGGATCCTGCCGAAGTATTTCAGTTCAGAGTGGTCATTTGCTCAGTTCCATTTACCAGAA
GTCACTCGTTATATAGTAGCCTTTGGTGCCCAGAATACTGTGATGATGGTTGGCCTGGAT
GGCAGCTTCTACAGGTGCAGCTTTGACCAAGTGAATGGAGGGCAGATGTTGCAGAAGGAA
TATTTCCGGTTTCTTAAGTCCGACAACCCACCTTTCAGGACCGCAGCCGCTTGA

Peptide Sequence

PEP ID

OQU86241
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:4873447:4878173:-1 gene:SORBI_3003G053800 transcript:OQU86241 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSSQVSTSRGLHPPGKLGTFESPHAWPLPAPTAQPEAGRGDDQEVRLLSVAWNQDCGCFA
AGTSNGFRIFNCEPFKETFRRDLKSGGFGIVEMLFRCNILALVGGGSNVQYPPNKVMIWD
DHQSRCIGEFAFRSDVRAVKLAKDYIVIVLERKIFVYNFTDLKLLYQIDTLSNPKGLCCL
SHHSNTSVLACPGVHQGHVRVEHFGLKMAKTIPAHDSHISCMSLTMDGLLLATASSKGTL
IRIFNTMDGTRLQEVRRGLDKAEIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVAGEDAS
SEQRALEGPRMDHQNSSSSIDPLIQANTGSNASSSLSFMRGILPKYFSSEWSFAQFHLPE
VTRYIVAFGAQNTVMMVGLDGSFYRCSFDQVNGGQMLQKEYFRFLKSDNPPFRTAAA

Transcript Sequence

Transcript ID

OQU86241
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:4873447:4878173:-1 gene:SORBI_3003G053800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTTCTCCACCATAGCCATCCTGCGATCCAGATCGCGCTCCGTCCCGTCCAGTCCCGTGCC
GGCCGTCGCAAACGGGGCCGGCTTTTGCTTCGCCTAGGCCGCCGTCAACGAAACGGCATC
CCGCGGTGACTACTACTGACAACAGAACAGCAACAGGTCCCGCACCCCCCCGTAACGAGA
GTTTCATCAAGGGGAGAAAGAGAAACACACAAAGTTGACGTTTTACTGATGGGATTAGCA
CGGTCGAACGGAACGGAGGTGGGGTTAATTGCGGCGCACGCATCCGGCGGAGGTGAGCGC
TTCCCGATCCCCGACTCCCCTTCCCTCGTACGGTACCTCCCTCTCATCCTTCTTCTCTCT
GCCCTTCCCTCGCTCGCCCGCTCCCCCCCGCCCTTCGCTTGCCGTCCCACTCCCCTTGCT
TCCGTGGCGCCCACGCCGCGCACGCGTGCTCGCCTCGCCTCGCCTGGAGACCCGTCTCCG
CCGCCCTCCCGCGTCGCGGCGCAAGAGGTAACGCTCGCGTCCCATTCTTCCGTTGTTCAG
GGGGGCAATCGCGATTCGCGCTCCTAGCGCGGCGGTCGATTACCCAGGTCCCGCCTAGAT
CCGCCGCGGTTGCGATTCTGTTCCCTTGTCGCGAGATCCGTCCGGGCCGGGATGGGATGG
GATGGGATAGGATTCCCGTTCCCCTCTCGCTGGTGAGGAAGGGAGTTTCCCCCGATGGAT
GTGCCCTCCGTCCATTCCAAATCCCAATTCCCCTGGGGAATTTTCGTTTGCCGTGCGGCG
GCGTAGCTATTAGCGTTAGCTTGTCGTTTCCATCTTCTTTGGGGGGAAACATCCTGATTC
CTGAACCCCAGTGGGCAAGGCCGTAACGACGCCTCGCCTCAAACCCCCAGCTGTGTATTA
TGCCTTTTTTCCTGTGCTACTGACAAATTGAGTGCTAAAACAATTTGAGGGTGTTTGGTT
TGTGGAACGAAGTGGTCTACCATCATCTTACTCTCTAGTTTTTTTGTTTGTTTTGTGGAA
TAGAGCCATTCCACTAAATTTTGAGGAATGGACTCATGATACATCACCCCATGTAGAATT
GGTAATCAAATACTCTTAGCTATAAGCTCGGACGATCTATAATCTGATGCTTCTTTTGCT
TCTTTAGCAGATTACACTTCGGCCAAGGTTTTATTTTCTTTGGCTGCTGTTGACGCTTTC
TACTTGCTGCAGGACACAACTGAATTTCGTCAGTGGCGAACCGCATTTGCCTTTGGTGTG
ACAGCTGAATCTTTGTGGTTCAAAGGCGATTGATTTGGGTTCAGTGACGCCTAATGAGCT
CCCAAGTCTCCACATCACGGGGTCTTCACCCCCCGGGCAAGCTTGGGACATTTGAGTCGC
CCCATGCCTGGCCGCTGCCAGCGCCTACAGCCCAGCCCGAAGCGGGCCGTGGTGATGATC
AGGAGGTCAGGCTGTTGTCGGTTGCCTGGAACCAGGATTGTGGATGCTTTGCTGCTGGTA
CCAGCAACGGGTTCAGGATCTTTAACTGCGAACCTTTCAAGGAGACTTTCAGGAGGGACC
TTAAGAGCGGCGGGTTCGGGATTGTCGAGATGCTGTTCCGTTGCAACATCCTTGCTCTTG
TAGGCGGCGGCTCCAATGTGCAGTACCCGCCGAACAAGGTGATGATCTGGGATGACCACC
AGAGCCGTTGCATTGGAGAGTTCGCCTTTCGCTCTGATGTCCGGGCGGTAAAATTAGCAA
AGGACTACATCGTGATTGTCCTCGAGCGCAAGATATTCGTTTACAACTTCACCGATTTGA
AGCTGCTCTACCAGATTGACACCCTGTCAAATCCCAAGGGACTTTGCTGCCTCTCTCATC
ATTCCAATACTTCAGTTTTGGCCTGCCCTGGGGTGCACCAGGGGCACGTTCGCGTGGAGC
ATTTCGGGCTGAAGATGGCGAAGACAATCCCAGCTCATGATTCACACATCTCTTGCATGT
CACTGACAATGGATGGTCTTCTACTGGCAACCGCAAGCTCGAAGGGCACTTTGATCAGAA
TATTCAACACAATGGATGGCACTCGCCTACAAGAGGTACGCAGAGGTCTTGACAAAGCAG
AAATATATAGCATTGCGTTGTCACCAAATGTGCAGTGGTTGGCAGTGTCCAGCGACAAAG
GGACTGTTCATATTTTCTCCCTGAGAGTCAGAGTTGCTGGGGAGGATGCAAGCAGTGAGC
AACGCGCTCTTGAAGGTCCACGGATGGATCACCAGAATTCTTCAAGTTCTATCGATCCTC
TTATTCAGGCGAACACTGGATCCAATGCGAGTTCATCACTGTCTTTTATGAGAGGGATCC
TGCCGAAGTATTTCAGTTCAGAGTGGTCATTTGCTCAGTTCCATTTACCAGAAGTCACTC
GTTATATAGTAGCCTTTGGTGCCCAGAATACTGTGATGATGGTTGGCCTGGATGGCAGCT
TCTACAGGTGCAGCTTTGACCAAGTGAATGGAGGGCAGATGTTGCAGAAGGAATATTTCC
GGTTTCTTAAGTCCGACAACCCACCTTTCAGGACCGCAGCCGCTTGACCTGCATGATGAT
CATCCCACCTTGTAAATACCGAAGGTTGTGCCCGGTCTATTGTACATATCATCTTCTCGC
CGGCTAAGTTATAGGCAGCCGGAATAATGAGAGCTGGCTGTTGGATCGCAACCTACAGGA
TTTCAACGTTCAGATAAGATTTCTGAAGCGGTTGGTGTCCCATCCAAATTGCAAGCATTA
TTTGCGTTACTCTTGTTTTCTTCAAACGAGAACACCCATTGGTACATATAACATAAAAGT
TCAATAACGTTGACCATGTGGCATTGTGCGTCTGCAAGGTTGTGTAACAAATCTCAGACA
TGTTCTTGCCTGTGGCTTATTATTGATCTTGATGACTGTTACGTACTACCTTAGGGCACG
TTCGGTTAGAGGTGAATCAGACTGGGAATCATTCCAGCTAATAAAAGGTAGTACAAATTT
GTCTTGCAATTCCGACCGGAAGTTTTTCAGGGAGCTGTTCCCTGCAAAACGAACGGGGCC
TTAGTGTGGAAGTGCAATCAGGTTCTGCATGTTCTGAGGTTGCGTTGCT