Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86226
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:4481482:4484359:1 gene:SORBI_3003G048700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTACCATCAAAGAGGAGTCCGACTACGACAGCAGCCGGTCCTCGCTCACGGCGCCA
GGCTCCCGCAGGAGCTGGATCAGTGACATTGGCAGCTCAAGCTCGGTCTCGGTGCGCTCC
TTCGGCCGAGGCTGGGATACACCAGCCGCGTCATGCCGCCACAAGCCTCACAAGGCGAAC
CAGGCCGAGTGGGAGGCCATCAGGCGCGTCCGTGCTACCTCAGGCCGCGTCGGCCTGGAG
CACTTCCGCCTGGTGCGGCGTCTGGGCAGCGGCGACCTGGGGAACGTCTACCTCTGCCAG
CTGCGTGAGCCGTGGTCGACCGGGTGCCTGTATGCCATGAAGGTGGTGGACAAAGACGCG
CTGGCGTTCCGCAAGAAGCTGCGGCGAGCGGAGGTGGAGCGTGAGATCCTTCGCACGCTC
GACCACCCCTTCCTGCCGACATTGTATGCCGACTTCGAGGCGTCGCACTACGCCTGCCTC
GTGATGGAGTTCTGCCCCGGCGGGGACTTGCATGTTGCCCGGCAGCGGCAGCCCGGCAGG
CGGTTCAGCATCTCCTCGGCGAGGTTCTATGTGGCCGAGACGGTGCTAGCCCTGGAGTAC
CTGCACATGATGGGGGTGGTGTACAGGGACCTCAAGCCGGAGAATGTCCTCGTGCGCGGC
GACGGCCACATCATGCTCTCGGACTTCGACCTCTCCCTCAAGTGCGACGTCGTCCCGAGG
CTGCTCCGTCACAACAGCCTCCCCCACAATGTCAGTGCTGCAGGTGGCGGGAGAACAGAC
GCCGGGAAGCCGTCCTGCGTGCCGCCGATCCAGCCGGTGCTGTCGTGCCTGTTCAACGGC
GTGCACAAGTGCAAAGCAAAGGAGGGCGCGCCAAAGCCCGGCGACAACGGCGGCGAGGCG
GACAGCGCCGCCGGCGACAGGACGTCGGAGCCCGGTGACAGCAATCCGGAGCTGGTAGTG
GAGCCTGTCTCCGCGCGGTCCAAGTCGTTCGTGGGCACGCACGAGTACCTGGCGCCGGAG
GTGATCTCCGGGCAGGGCCACGGCAGCGCCGTCGACTGGTGGACGCTGGGGGTGTTCATG
TACGAGATGATGTACGGGCGGACGCCGTTCAAGGGCGAGAACAACGAGAAGACGCTGGTC
AACATCATCAAGCAGCCGCTGGCCTTCCCGCGTGTCGCGGTGGCCAGCGGCAGGGAGTGG
GACGAGCACCTGCGCGCGCAGGACCTGATGACCCAGCTCCTGGCCAAGAACCCCAAGAAG
CGGCTGGGCAGCTGCACGGGGTCGGCGGAGGTGAAGAGGCACGACTTCTTCAAGGGCGTG
AACTGGGCGCTCGTCAGGTCAGTCCGTCCCCCCGAGGTGCCCAAGCCGCCGGTGGTGCCG
GCGCCGGCGCCGGCGCAGAAGAAGGTGCTGATGATGAGCAGGAAGGAGCGGCAGGAGCCG
TACAACTACAACCCCCGGTCCGACGAGCGCTTCGAGTACTTCTAG

Peptide Sequence

PEP ID

OQU86226
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:4481482:4484359:1 gene:SORBI_3003G048700 transcript:OQU86226 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATIKEESDYDSSRSSLTAPGSRRSWISDIGSSSSVSVRSFGRGWDTPAASCRHKPHKAN
QAEWEAIRRVRATSGRVGLEHFRLVRRLGSGDLGNVYLCQLREPWSTGCLYAMKVVDKDA
LAFRKKLRRAEVEREILRTLDHPFLPTLYADFEASHYACLVMEFCPGGDLHVARQRQPGR
RFSISSARFYVAETVLALEYLHMMGVVYRDLKPENVLVRGDGHIMLSDFDLSLKCDVVPR
LLRHNSLPHNVSAAGGGRTDAGKPSCVPPIQPVLSCLFNGVHKCKAKEGAPKPGDNGGEA
DSAAGDRTSEPGDSNPELVVEPVSARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFM
YEMMYGRTPFKGENNEKTLVNIIKQPLAFPRVAVASGREWDEHLRAQDLMTQLLAKNPKK
RLGSCTGSAEVKRHDFFKGVNWALVRSVRPPEVPKPPVVPAPAPAQKKVLMMSRKERQEP
YNYNPRSDERFEYF

Transcript Sequence

Transcript ID

OQU86226
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:4481482:4484359:1 gene:SORBI_3003G048700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGGGTGATGCATGTGTAACTTTCAACTGCAAAAGCTTTAGCAGTTATCTTCTCTTCTTTA
ATCCCAAAGCATCCTGCTTGCTGTTGGTTCTTCATGTGACCCCGTGCAGTCATAAAGCAA
TGCCACCACCATGCTTGCACTGGAACTGTTGCAAAGTTCATTGCATGATTCCAGTTCTCC
ATGTTTTTTTTCTTTCAATACGCATTTTACCCATCTATACTTACTGCTTGGGTTTACTTT
TGTGCAGTGCAGCTAGCAGCTTGAGCGTTGAGGACACTGAGCCAGGTAGTTTCCAACTAG
CCTTGGGGGTCCAATGATGCAATGATTCTTGCCTGTAATCATCCATGCAAGTGGAGAAAA
AGGTGAATCAAACCCTGTTAGATCCTGGGGAATAGTTATATACATAACAATAGATACTCT
ACAGCATAAAGCTGGCTTATGCGACTTTAAACATTTTTTAAACTTGCCATCCACACGACC
ACACATTAGCTCATGGTAACCACAGTTCACAGCTGCATATATAGTAACACAGGGAGCTGG
GAGGTAGAGAGCCTAGCTTCTCTTTGGTCTCTCGCTCGCTGCGTTGCCTTCCTGTCTTGG
AGCCTCAATGGCTACCATCAAAGAGGAGTCCGACTACGACAGCAGCCGGTCCTCGCTCAC
GGCGCCAGGCTCCCGCAGGAGCTGGATCAGTGACATTGGCAGCTCAAGCTCGGTCTCGGT
GCGCTCCTTCGGCCGAGGCTGGGATACACCAGCCGCGTCATGCCGCCACAAGCCTCACAA
GGCGAACCAGGCCGAGTGGGAGGCCATCAGGCGCGTCCGTGCTACCTCAGGCCGCGTCGG
CCTGGAGCACTTCCGCCTGGTGCGGCGTCTGGGCAGCGGCGACCTGGGGAACGTCTACCT
CTGCCAGCTGCGTGAGCCGTGGTCGACCGGGTGCCTGTATGCCATGAAGGTGGTGGACAA
AGACGCGCTGGCGTTCCGCAAGAAGCTGCGGCGAGCGGAGGTGGAGCGTGAGATCCTTCG
CACGCTCGACCACCCCTTCCTGCCGACATTGTATGCCGACTTCGAGGCGTCGCACTACGC
CTGCCTCGTGATGGAGTTCTGCCCCGGCGGGGACTTGCATGTTGCCCGGCAGCGGCAGCC
CGGCAGGCGGTTCAGCATCTCCTCGGCGAGGTTCTATGTGGCCGAGACGGTGCTAGCCCT
GGAGTACCTGCACATGATGGGGGTGGTGTACAGGGACCTCAAGCCGGAGAATGTCCTCGT
GCGCGGCGACGGCCACATCATGCTCTCGGACTTCGACCTCTCCCTCAAGTGCGACGTCGT
CCCGAGGCTGCTCCGTCACAACAGCCTCCCCCACAATGTCAGTGCTGCAGGTGGCGGGAG
AACAGACGCCGGGAAGCCGTCCTGCGTGCCGCCGATCCAGCCGGTGCTGTCGTGCCTGTT
CAACGGCGTGCACAAGTGCAAAGCAAAGGAGGGCGCGCCAAAGCCCGGCGACAACGGCGG
CGAGGCGGACAGCGCCGCCGGCGACAGGACGTCGGAGCCCGGTGACAGCAATCCGGAGCT
GGTAGTGGAGCCTGTCTCCGCGCGGTCCAAGTCGTTCGTGGGCACGCACGAGTACCTGGC
GCCGGAGGTGATCTCCGGGCAGGGCCACGGCAGCGCCGTCGACTGGTGGACGCTGGGGGT
GTTCATGTACGAGATGATGTACGGGCGGACGCCGTTCAAGGGCGAGAACAACGAGAAGAC
GCTGGTCAACATCATCAAGCAGCCGCTGGCCTTCCCGCGTGTCGCGGTGGCCAGCGGCAG
GGAGTGGGACGAGCACCTGCGCGCGCAGGACCTGATGACCCAGCTCCTGGCCAAGAACCC
CAAGAAGCGGCTGGGCAGCTGCACGGGGTCGGCGGAGGTGAAGAGGCACGACTTCTTCAA
GGGCGTGAACTGGGCGCTCGTCAGGTCAGTCCGTCCCCCCGAGGTGCCCAAGCCGCCGGT
GGTGCCGGCGCCGGCGCCGGCGCAGAAGAAGGTGCTGATGATGAGCAGGAAGGAGCGGCA
GGAGCCGTACAACTACAACCCCCGGTCCGACGAGCGCTTCGAGTACTTCTAGGTCGTCGA
TTGCGTGGCGTCGATCTCGATCGTTTGAAGTACGGCAGCATGTGTTGGTGATGAAAGTGT
ACATAGAGCAGCACGACGTACGTACGTATACGTACGCACGCTCTTGAAGATCGGAGCATG
CATGGACCAATCAGGCTCGCTGTAGGGATCGTGGTTGCGTATCGATCTGGCCAATAAAGA
TTTTTGCAGCTTCTCGTTTTTACTAGTTTCTCTCCCATGCAACATGATGGATCGATCCTG
TTAAAAGAGAGACC