Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU86074
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:821665:827300:-1 gene:SORBI_3003G009200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAAGTTCCGATCAGCTCCCAGACTCAGCGCGTAGCTGCCTCCCGCACTGGACCTACG
ACCTCCGTACAAGAGGTGGTCGTTGACGGCGGCCACGGGCTCCCTCCCGGCGGCGGCAGG
TGGGCCGCGGCCGCCGTCAACGGCCACCTCTTGTACGGAGGTCGGCGGCGAATGGGATTG
GGACGGCAGATCGACGCCTTCCGCGGCGACAGCATATGTTTTGAGAAGGTTGCAGCGGTG
AGCTACAGCGGCTTGATCGTGGCCCCGGATGGGTCTGGACGTGCTCTCGTTTGGAACCAG
CAGGGCAAGGTGTGGTTGGCGTCCATGCCGGCAGCAGAGGAGATGGGGGCTGCCATGCCC
ATGCGGGTGGGTGACAGCCCGTTCATTGACCTCTCCAGCCTTGCACGCTATGATGAGGCG
CGTGGCCTATGTGGCCTGGTTAGTGTGGTTTTTCACCCACGCATGGATGTCCGGCTCTTT
GTGTCTTACACCACCAAGTCCAACGACGACTGTGGCCACACAGCTGTGGAGGCGTCAACA
GGCTGGTGCACCATCCTCGTAGTAAAGGAGCTCTCCCCAAGAGAAGGTGGTTTCAAGGCT
ACCACGGTGTTCTCCATGGACGTACCTGCGGCCCAGGCTGGGTTTTCACTGCTTGACCAT
GGAGGCCAAATTTTCTTCCGGCCCAATGATCCATCCCTTTACCTCGTCACTGGGCATGGC
GTTTCAACAGATTTCATCTCATCTAACAAGAGCTCATTGCTAGGGAAAATCCTTCGGCTC
CACGTGGACCACGACATGCCTGGTCTCGACAGATTCCTCGCGTATCCATCTCTTCGTCTA
CTTCACGCGGCATCTATTCATCTCGACAAATCACGTGGCAGCTCCTGCTCCTTGACGCGC
GGACGCACAGAAGACCCACCGGTGCCCAGGCAATCAGCAGATCCGACGCACTCGCGTCAC
CCTCATGGATTCCGACGACCGCTGCTTGGAACTGATGCTGAGGTCTTCTTCTCTGGTCTC
AACATCCCAAGGGGGTGTGCCTTGGATTATTCTGGAAGTCTGTTCTGCGCCAACATCGAT
GAGACACAAGGAGAGCTGGTATACTTGATCTTCGACAACAACCCATCCTCAGCCACCTCA
GTCGTCGTCCTCGACCTCAAACATCCAATGGCGCCAGGGTCGATTGTCTGGGGTCTCCAG
TACCACGGTTCAGCTGACGCCTCTCTAAGCGGGAGGTACATCTATGCATACAACTCTGCA
CTTTGGTCGGTCACTATGGAGTCGCAGCCAAGCAGCGGTCGCTACACCCTCACCCAAATG
GTCGTGGCTTGCTCCAGGACCACCCCGATGCCTTGCCAAGACAGCCCCATCGTCGTCTCC
TTTGCTGAGGACCAAAACAAGGAGGGCATTATACTCGCCACAGATGGTGTGTATAGGATC
GCTGCATCCAGCCTCTGCGCCGGCGGCCCACTGGGGCTGGGGCTGGGGCCGGCGCCTACG
CCTCGTCGTCACTCGTTGGGCAAGATGGTGGCTGCAGTATTTGGATCAGCGGGTGCCATG
GGAACGGTTTGGCGTGGGTGTTCTGGAAGAAACAAGAAGATGGTAAGGATTCACCATGTT
CCATCAGCATCAAGTGTTCCCCCGTCTGCTCATGCTGCAACAACACCAACACGTGCATTT
GGTCCTGCTGCTGAGCTGCTCCTAGTAGGTTTGTGCAGTGTACAAACAGGAGCTGGAAAG
GCTCCCAAATTACATTGTGAATTGCTTTCAGACTTGGTCATCTAA

Peptide Sequence

PEP ID

OQU86074
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:821665:827300:-1 gene:SORBI_3003G009200 transcript:OQU86074 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQVPISSQTQRVAASRTGPTTSVQEVVVDGGHGLPPGGGRWAAAAVNGHLLYGGRRRMGL
GRQIDAFRGDSICFEKVAAVSYSGLIVAPDGSGRALVWNQQGKVWLASMPAAEEMGAAMP
MRVGDSPFIDLSSLARYDEARGLCGLVSVVFHPRMDVRLFVSYTTKSNDDCGHTAVEAST
GWCTILVVKELSPREGGFKATTVFSMDVPAAQAGFSLLDHGGQIFFRPNDPSLYLVTGHG
VSTDFISSNKSSLLGKILRLHVDHDMPGLDRFLAYPSLRLLHAASIHLDKSRGSSCSLTR
GRTEDPPVPRQSADPTHSRHPHGFRRPLLGTDAEVFFSGLNIPRGCALDYSGSLFCANID
ETQGELVYLIFDNNPSSATSVVVLDLKHPMAPGSIVWGLQYHGSADASLSGRYIYAYNSA
LWSVTMESQPSSGRYTLTQMVVACSRTTPMPCQDSPIVVSFAEDQNKEGIILATDGVYRI
AASSLCAGGPLGLGLGPAPTPRRHSLGKMVAAVFGSAGAMGTVWRGCSGRNKKMVRIHHV
PSASSVPPSAHAATTPTRAFGPAAELLLVGLCSVQTGAGKAPKLHCELLSDLVI

Transcript Sequence

Transcript ID

OQU86074
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:821665:827300:-1 gene:SORBI_3003G009200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AATTACAGAATTCTATATAAATATAAAGAAGATTTCTTTTACATTTTGGCGGGGAGCCCG
GCGTGGCCGGGCGGTGGCTCCGCCAGTGCATGTGCATAAGTTTTACCGGTGGTGGTGGTG
GCTAACGACGCCGGAGGGCAGGCAAAGGGCAAAGGCAGGGTGGTCCCGTGCCTGAACTCT
GAGTTGAAATAGCTTCAAATGACACCCAACCTGTTCGATACTACTCTGTACCTAATTTGG
GTTTTGTGACGGCCGGGGAGCCGGGCGAGGCACAAGAGTTCGTTTGCCAGTGGAGAGGAC
TGCAATGCAAGTTCCGATCAGCTCCCAGACTCAGCGCGTAGCTGCCTCCCGCACTGGACC
TACGACCTCCGTACAAGAGGTGGTCGTTGACGGCGGCCACGGGCTCCCTCCCGGCGGCGG
CAGGTGGGCCGCGGCCGCCGTCAACGGCCACCTCTTGTACGGAGGTCGGCGGCGAATGGG
ATTGGGACGGCAGATCGACGCCTTCCGCGGCGACAGCATATGTTTTGAGAAGGTTGCAGC
GGTGAGCTACAGCGGCTTGATCGTGGCCCCGGATGGGTCTGGACGTGCTCTCGTTTGGAA
CCAGCAGGGCAAGGTGTGGTTGGCGTCCATGCCGGCAGCAGAGGAGATGGGGGCTGCCAT
GCCCATGCGGGTGGGTGACAGCCCGTTCATTGACCTCTCCAGCCTTGCACGCTATGATGA
GGCGCGTGGCCTATGTGGCCTGGTTAGTGTGGTTTTTCACCCACGCATGGATGTCCGGCT
CTTTGTGTCTTACACCACCAAGTCCAACGACGACTGTGGCCACACAGCTGTGGAGGCGTC
AACAGGCTGGTGCACCATCCTCGTAGTAAAGGAGCTCTCCCCAAGAGAAGGTGGTTTCAA
GGCTACCACGGTGTTCTCCATGGACGTACCTGCGGCCCAGGCTGGGTTTTCACTGCTTGA
CCATGGAGGCCAAATTTTCTTCCGGCCCAATGATCCATCCCTTTACCTCGTCACTGGGCA
TGGCGTTTCAACAGATTTCATCTCATCTAACAAGAGCTCATTGCTAGGGAAAATCCTTCG
GCTCCACGTGGACCACGACATGCCTGGTCTCGACAGATTCCTCGCGTATCCATCTCTTCG
TCTACTTCACGCGGCATCTATTCATCTCGACAAATCACGTGGCAGCTCCTGCTCCTTGAC
GCGCGGACGCACAGAAGACCCACCGGTGCCCAGGCAATCAGCAGATCCGACGCACTCGCG
TCACCCTCATGGATTCCGACGACCGCTGCTTGGAACTGATGCTGAGGTCTTCTTCTCTGG
TCTCAACATCCCAAGGGGGTGTGCCTTGGATTATTCTGGAAGTCTGTTCTGCGCCAACAT
CGATGAGACACAAGGAGAGCTGGTATACTTGATCTTCGACAACAACCCATCCTCAGCCAC
CTCAGTCGTCGTCCTCGACCTCAAACATCCAATGGCGCCAGGGTCGATTGTCTGGGGTCT
CCAGTACCACGGTTCAGCTGACGCCTCTCTAAGCGGGAGGTACATCTATGCATACAACTC
TGCACTTTGGTCGGTCACTATGGAGTCGCAGCCAAGCAGCGGTCGCTACACCCTCACCCA
AATGGTCGTGGCTTGCTCCAGGACCACCCCGATGCCTTGCCAAGACAGCCCCATCGTCGT
CTCCTTTGCTGAGGACCAAAACAAGGAGGGCATTATACTCGCCACAGATGGTGTGTATAG
GATCGCTGCATCCAGCCTCTGCGCCGGCGGCCCACTGGGGCTGGGGCTGGGGCCGGCGCC
TACGCCTCGTCGTCACTCGTTGGGCAAGATGGTGGCTGCAGTATTTGGATCAGCGGGTGC
CATGGGAACGGTTTGGCGTGGGTGTTCTGGAAGAAACAAGAAGATGGTAAGGATTCACCA
TGTTCCATCAGCATCAAGTGTTCCCCCGTCTGCTCATGCTGCAACAACACCAACACGTGC
ATTTGGTCCTGCTGCTGAGCTGCTCCTAGTAGGTTTGTGCAGTGTACAAACAGGAGCTGG
AAAGGCTCCCAAATTACATTGTGAATTGCTTTCAGACTTGGTCATCTAAGATGTGGATAC
AAGTGCAAGAATAAATAGTATTTTTGAGCAGCAGATGTAAACGCCGGGTGTGCCAAAGTA
TGGGCTGGGCTGTAAGGTTCAGTAGGCGTGAAACTTTGTGAACTGTAGTCTTTTTGTTGC
GCAGCCCCAAGAAGGTATAGGTTTTGATATTCCAGTGTAGAGGGTTGAAGAGATCTCTTG
AATTGTAGAAGTTTGCGGGACTGATTATCAGTGAGAAAGTTCACTAAGGTAGAGAATTGT
TTTGCCACTCTTGCTGCTAGGCAGAGGGCAGCTGCTGCAGCCATGAGCACCGACTGGATC
CTGTTATTCTAGCTTGAACATAAAAGTGCTGTAGATGATGTGTTGTCTGGGTTGAGGAGG
AACCGAGGAAGACTCCCAGCCCTGCTGTTCATGTTGTCCGGCAGTAGGGATGTCGCTGCC
GTCGCCGGCCTC