Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85829
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:65461109:65464678:1 gene:SORBI_3004G319600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTGGAGACGGGCGGGGGGAGGCTGCACCAGCGCCGGGGCGCGGTCGCCTTCGTCGCG
GCAAACAAGGCGCTGCTGGCTGCCGCGTGGGTCGTCGGGTTCGCGCTCGTGTTCCTGTGG
CAGAGCGCCTCGATGTCCTTCGGCAGCGCTGGCGCCGGCGGCGCCGCTGGCGGAGGGTTC
CTCAGGCTCCTGTCGGCGCCGCCTCCGCCGCCGCGCCCCGCGCCGCGGCTTCGCCCCACG
GCGTACAACCTCACGGACTTCGGCGCCGTCGGGGACGGCCGGGCCGTCAACACCGAGGCG
TTCGAGCGCGCTGTCGAGACCATCGCCGCCCTCGCGGAGCGAGGCGGCGGGCAGCTTAAT
GTGCCCCCCGGGCGCTGGCTCACGGCGCCCTTCAACCTCACCAGCCACATGACGCTGTTT
CTTGCCGAGGGCGCGGAGATCCTTGGCATTACGGATGAGAAGTACTGGCCATTGATGCCA
GCATTACCATCATATGGGTATGGGCGGGAGCGCAAAGGACCACGCTTTGGGAGTCTCATT
CATGGACAGAATTTGAAAGATGTAGTCATTACAGGACATAATGGGAGCATAAATGGCCAG
GGTGAAGTTTGGTGGATGAAGCATCGCAGAAGAATTCTGAATAACACAAGACCTCCTCTT
GTGCAGCTGATGTGGTCCAAGGACATTATTATTGCCAACATAACATTGAGGAATTCACCT
TTCTGGCACTTGCATCCGTATGATTGCACAAATGTAACTGTTTCGAATGTTACTATCTTA
TCTCCTGTTTCTGGTGCTCCAAACACAGATGGCATAGATCCAGATTCTTCTCAGGATGTG
CTTATTGAGAATTGCTACATATCGGTTGGTGATGATGCAATAGCTATAAAGAGTGGTTGG
GATCAGTATGGGATTGCATATGGTCGCCCATCTTCTAACATTTCAATCCGCAATGTAAAT
GCCCGTTCTCTAGTGAGTGCTGGAATTTCAATAGGAAGTGAGATGTCTGGCGGAGTAGCA
AATGTTACGGTGGAGAATGTACGCATCTGGGAATCAAGAAGAGGTGTGAGGATAAAGACT
GCCACGGGAAGAGGTGGCTACATCCGTAACATCTCCTACCGCAACATTACTTTTGACAAT
GTTCGTGCTGGGATTGTGATAAAGGTTGACTACAACGAGCATGCTGATGATGGATATGAC
CGGACAGCATTCCCAGATATCACGAGTATATCGTTCAAGGGAATCCATGGGCGGGGTGTT
CGGGTGCCTGTCCGTGCTCATGGCAGCGATGTCATCCCCATCAGGGACATCAGCTTCCAG
GACATGTCGGTAGGCATCAGCTACAAGAAGAAGCACATCTTCCAGTGCTCCTACGTTGAG
GGGCGCGTCGTCAGGCCCGTGTTCCCGAAACCATGTGAGAACCTGGACATCTATGACGAG
CAAGGGCAGCTTGTCAAGCGGGCAGTGGCCCTGAACAGCACAGAACTTGACTACGATATA
TGA

Peptide Sequence

PEP ID

OQU85829
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:65461109:65464678:1 gene:SORBI_3004G319600 transcript:OQU85829 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVETGGGRLHQRRGAVAFVAANKALLAAAWVVGFALVFLWQSASMSFGSAGAGGAAGGGF
LRLLSAPPPPPRPAPRLRPTAYNLTDFGAVGDGRAVNTEAFERAVETIAALAERGGGQLN
VPPGRWLTAPFNLTSHMTLFLAEGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLI
HGQNLKDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLVQLMWSKDIIIANITLRNSP
FWHLHPYDCTNVTVSNVTILSPVSGAPNTDGIDPDSSQDVLIENCYISVGDDAIAIKSGW
DQYGIAYGRPSSNISIRNVNARSLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKT
ATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGRGV
RVPVRAHGSDVIPIRDISFQDMSVGISYKKKHIFQCSYVEGRVVRPVFPKPCENLDIYDE
QGQLVKRAVALNSTELDYDI

Transcript Sequence

Transcript ID

OQU85829
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:65461109:65464678:1 gene:SORBI_3004G319600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATTGATTCATTCTTGTGCAAATCTATCTGTAATTACCGTGTTGCCAAAGCTGCACCAAGC
AAAGCTAATCCAGTAATCCTTCATCATCAGCAAGAACAAAGTATACGTACCTTCCACCGT
CCGCTCTCCATCCAATGGCCCATATGCTCAGGGCTCACAGTGGCAGCATAGTAATTCTGG
CCATCTTCTTCTTCCACTGCACAGCGCGGCACCCAACCCAACCCACCATGATCGGGAGGA
GCGCACACAACCGTCCGTCCGGCCATCCCATCGCGTCGGCTTCACTCAAACGGCTTCTCC
CGCATCCTATAAAAACCTCCTCACCAACTTCCCATGGCGGAAATTCTCGCCCTCCCACAC
CGACCCCTCTCCCCCTCGGCCCGCCTTCCCCCGGGAACACGCGCCCTGCGCCACCGACTG
ATCCCAGGCCGTCGCCGCGTCCGACCTAGGTCGCGAGATCTCGGGGGAGCGGAGCCCCGC
CGCGCTCCCGCTTCCTGCAGGAGACACGCAGGGACCGCGCGGCGCGATGGTGGAGACGGG
CGGGGGGAGGCTGCACCAGCGCCGGGGCGCGGTCGCCTTCGTCGCGGCAAACAAGGCGCT
GCTGGCTGCCGCGTGGGTCGTCGGGTTCGCGCTCGTGTTCCTGTGGCAGAGCGCCTCGAT
GTCCTTCGGCAGCGCTGGCGCCGGCGGCGCCGCTGGCGGAGGGTTCCTCAGGCTCCTGTC
GGCGCCGCCTCCGCCGCCGCGCCCCGCGCCGCGGCTTCGCCCCACGGCGTACAACCTCAC
GGACTTCGGCGCCGTCGGGGACGGCCGGGCCGTCAACACCGAGGCGTTCGAGCGCGCTGT
CGAGACCATCGCCGCCCTCGCGGAGCGAGGCGGCGGGCAGCTTAATGTGCCCCCCGGGCG
CTGGCTCACGGCGCCCTTCAACCTCACCAGCCACATGACGCTGTTTCTTGCCGAGGGCGC
GGAGATCCTTGGCATTACGGATGAGAAGTACTGGCCATTGATGCCAGCATTACCATCATA
TGGGTATGGGCGGGAGCGCAAAGGACCACGCTTTGGGAGTCTCATTCATGGACAGAATTT
GAAAGATGTAGTCATTACAGGACATAATGGGAGCATAAATGGCCAGGGTGAAGTTTGGTG
GATGAAGCATCGCAGAAGAATTCTGAATAACACAAGACCTCCTCTTGTGCAGCTGATGTG
GTCCAAGGACATTATTATTGCCAACATAACATTGAGGAATTCACCTTTCTGGCACTTGCA
TCCGTATGATTGCACAAATGTAACTGTTTCGAATGTTACTATCTTATCTCCTGTTTCTGG
TGCTCCAAACACAGATGGCATAGATCCAGATTCTTCTCAGGATGTGCTTATTGAGAATTG
CTACATATCGGTTGGTGATGATGCAATAGCTATAAAGAGTGGTTGGGATCAGTATGGGAT
TGCATATGGTCGCCCATCTTCTAACATTTCAATCCGCAATGTAAATGCCCGTTCTCTAGT
GAGTGCTGGAATTTCAATAGGAAGTGAGATGTCTGGCGGAGTAGCAAATGTTACGGTGGA
GAATGTACGCATCTGGGAATCAAGAAGAGGTGTGAGGATAAAGACTGCCACGGGAAGAGG
TGGCTACATCCGTAACATCTCCTACCGCAACATTACTTTTGACAATGTTCGTGCTGGGAT
TGTGATAAAGGTTGACTACAACGAGCATGCTGATGATGGATATGACCGGACAGCATTCCC
AGATATCACGAGTATATCGTTCAAGGGAATCCATGGGCGGGGTGTTCGGGTGCCTGTCCG
TGCTCATGGCAGCGATGTCATCCCCATCAGGGACATCAGCTTCCAGGACATGTCGGTAGG
CATCAGCTACAAGAAGAAGCACATCTTCCAGTGCTCCTACGTTGAGGGGCGCGTCGTCAG
GCCCGTGTTCCCGAAACCATGTGAGAACCTGGACATCTATGACGAGCAAGGGCAGCTTGT
CAAGCGGGCAGTGGCCCTGAACAGCACAGAACTTGACTACGATATATGAGGCGCATACCA
TACCACAGCATTGACAGTTGGAGTAGTGGAAATTGGTGCTCTCTACCCTCAGAAATCAAT
TTTCTCCAATTCTCCAGGTTTTTTTGATCTAGAATTGTAAATAGAGGAGATTCTCCTCTT
GATAGGTTTGCTGCTTACAGTGGCTGATTGTATCTCACCGCTCACCGGTGATTTGGCCAT
GGACATTTCGCATCGCCAGAACCTTCCTGGCGACAAATGCATGCTGTCAATATATTGTAC
GGCTGAATAGTGTATGTAGCATATACAGTATTATTCTTATTTTTAAGCATATCAGCAAGG
AAAGGAGAACCATATGGTCTCACCTCTCACATGGCTATAGCCTTTAATTTCAGCTATCTG
TTGGGCCGGGCTTTACATTCGATGTTTAATTGGGCCAAAACTGCAAGATGTTACTACTCT
ACTTGCCACCCATGATTACAACGAGCATACCAACCTGCTCCTGTTTCAATTTCACCGGTC
TTCAACCAGTGGAAGGTATGTACTTTCTCCGTCCAAA