Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU85788
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:64609082:64612290:1 gene:SORBI_3004G308600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACATGGACATCAAGGAGCGGATCCGCCGCTCGCCGCCGCCGACGCCGAAGGCGGTA
GGGGAGGCGGCGTCCGCGCCCGGGCACCCGCGCGGGAGGAAGGGCCGGGTCGCGCTGCTG
CCCCTGTCGATCGCGGCGCTCGTGGCGTGCGGGGTCACGCTGCTGCTGCTCGCGGGCGGC
TCCGCGGCGAGGAGGGGCGGCCAATTCTCCGGCGCGGATCGTACCACTCTCTCCGGCGCC
GGCAACAACGACCGTGGCGGCCTTGACCAGGCCGGACCGCGCGATGGAGAGCATGAAACT
ATGGTGTCTTCCAAAGTTCAAAGGGACAGACTAATTGGTGGCTTGTTAGCTCCTGGTTTT
GATGAACAGTCATGTCTAAGTAGATACCAATCAGCATTGTACCGTAAAGAATCGCCCCAT
TTGATATCATCATACCTTCTGGAAAGACTGAGAGAACATGAGGTTCTCCAGAAGAAATGT
GGCCCGTATACAGAGTCATACAAGAAAGCTATTGAGCAACTAAAATCTGGTCAGGATGTT
ATGGTTGGAGATTGCAACTTTTTGGTATGGGTATCTTATAGTGGTCTTGGGAACAGGATC
TTGACTATTGCCTCAGCATTTCTCTATGCCATCCTTACAAACAGAGTTTTACTTGTAGAT
GGAGATAAAGGCACTGCAGATCTTTTCTGTGAACCATTCCCTGAAACTTCATGGTTATTA
CCACCGGATTTCCCTATTATTCAATTTAAGAACTTCAGTATTGGCTCCCCCGAGAGTCAC
GGAAACATGGTGAAAACTGAAGCTATTCATTCTGATGGTTCTTTTAAGGGTCCTAAACCT
GCCTTTCTATATCTTCACCTGGCTCATGACTATGATGATTATGATAAACTTTTTTTCTGT
GAGCATAGTCAGCAACATCTTCAGAAGATCCCATGGCTGATCTTAAGATCCGATAATTAC
TTTGTACCTTCACTTTTTCTGATCCCATCATACCAAGAGGAACTCACGAGGCTGTTTCCG
CAGAAAGATGTCGTTTTCCATCACTTGGGACGTTACTTGTTCCACCCTACCAATGTTGTC
TGGGGCTTGATTACAAGGTACTACGATTCTTATCTTGCCAGAGCTGATGAGAAGTTAGGT
ATCCAGATCAGAGTCTTCGATACTGAAACCGGTCCATTTCAGCATGTCTTGGATCAGGTC
CTTGATTGCACACTGAAGGAAAAATTACTACCAGAGATTAACGCACAACAGCCGATTATC
TCGACAGGGAACATCAGGTCCAAAGTTGTTCTGATTACTTCTTTGAACTCAGGATACTAT
GAAAGAATCAGGAACATGTATTGGGAACATCCAACAGAGAGTGGTGAGATAATTAGCTTC
CACCAGCCAAGTCACGAGGAGCATCAGGATTCAGACAAGAAAATGCATAACATGAAAGCA
TTGGCAGAGATTTATCTGTTGAGCTTATCTGATGTTATGGTAACAAGTGCATGGTCAACT
TTTGGGTATGTAGCTCAAGGTCTGAGTGGTTCGAAGACGTGGCTAATGTTCAAGCCGGAA
AACCGCACTGCGCCTAATCCACCTTGCCGTCAAGTTATGTCTATAGAGCCGTGCTTTCAT
GCTCCACCTTTCTACGATTGCAAAACTAGGAAGGGAACTGATACAGGAAAGCTTGTTCCA
CATGTAAGACACTGTGAAGATATGAGCTGGGGGCTCAAGCTAGTTGATACGGGTGTATAG

Peptide Sequence

PEP ID

OQU85788
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:64609082:64612290:1 gene:SORBI_3004G308600 transcript:OQU85788 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDMDIKERIRRSPPPTPKAVGEAASAPGHPRGRKGRVALLPLSIAALVACGVTLLLLAGG
SAARRGGQFSGADRTTLSGAGNNDRGGLDQAGPRDGEHETMVSSKVQRDRLIGGLLAPGF
DEQSCLSRYQSALYRKESPHLISSYLLERLREHEVLQKKCGPYTESYKKAIEQLKSGQDV
MVGDCNFLVWVSYSGLGNRILTIASAFLYAILTNRVLLVDGDKGTADLFCEPFPETSWLL
PPDFPIIQFKNFSIGSPESHGNMVKTEAIHSDGSFKGPKPAFLYLHLAHDYDDYDKLFFC
EHSQQHLQKIPWLILRSDNYFVPSLFLIPSYQEELTRLFPQKDVVFHHLGRYLFHPTNVV
WGLITRYYDSYLARADEKLGIQIRVFDTETGPFQHVLDQVLDCTLKEKLLPEINAQQPII
STGNIRSKVVLITSLNSGYYERIRNMYWEHPTESGEIISFHQPSHEEHQDSDKKMHNMKA
LAEIYLLSLSDVMVTSAWSTFGYVAQGLSGSKTWLMFKPENRTAPNPPCRQVMSIEPCFH
APPFYDCKTRKGTDTGKLVPHVRHCEDMSWGLKLVDTGV

Transcript Sequence

Transcript ID

OQU85788
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:64609082:64612290:1 gene:SORBI_3004G308600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCGCGACACGACGCCCCACGTCGCGACTCGCGACCGCGGACGTACACCTTTGTGACCACA
CCGCGGCGGAAGCGCGGGGGGAGAAGTGAAGAACCCTACATACGGCTTCGGCTGGGGCGC
CACGCCGCATGGACATGGACATCAAGGAGCGGATCCGCCGCTCGCCGCCGCCGACGCCGA
AGGCGGTAGGGGAGGCGGCGTCCGCGCCCGGGCACCCGCGCGGGAGGAAGGGCCGGGTCG
CGCTGCTGCCCCTGTCGATCGCGGCGCTCGTGGCGTGCGGGGTCACGCTGCTGCTGCTCG
CGGGCGGCTCCGCGGCGAGGAGGGGCGGCCAATTCTCCGGCGCGGATCGTACCACTCTCT
CCGGCGCCGGCAACAACGACCGTGGCGGCCTTGACCAGGCCGGACCGCGCGATGGAGAGC
ATGAAACTATGGTGTCTTCCAAAGTTCAAAGGGACAGACTAATTGGTGGCTTGTTAGCTC
CTGGTTTTGATGAACAGTCATGTCTAAGTAGATACCAATCAGCATTGTACCGTAAAGAAT
CGCCCCATTTGATATCATCATACCTTCTGGAAAGACTGAGAGAACATGAGGTTCTCCAGA
AGAAATGTGGCCCGTATACAGAGTCATACAAGAAAGCTATTGAGCAACTAAAATCTGGTC
AGGATGTTATGGTTGGAGATTGCAACTTTTTGGTATGGGTATCTTATAGTGGTCTTGGGA
ACAGGATCTTGACTATTGCCTCAGCATTTCTCTATGCCATCCTTACAAACAGAGTTTTAC
TTGTAGATGGAGATAAAGGCACTGCAGATCTTTTCTGTGAACCATTCCCTGAAACTTCAT
GGTTATTACCACCGGATTTCCCTATTATTCAATTTAAGAACTTCAGTATTGGCTCCCCCG
AGAGTCACGGAAACATGGTGAAAACTGAAGCTATTCATTCTGATGGTTCTTTTAAGGGTC
CTAAACCTGCCTTTCTATATCTTCACCTGGCTCATGACTATGATGATTATGATAAACTTT
TTTTCTGTGAGCATAGTCAGCAACATCTTCAGAAGATCCCATGGCTGATCTTAAGATCCG
ATAATTACTTTGTACCTTCACTTTTTCTGATCCCATCATACCAAGAGGAACTCACGAGGC
TGTTTCCGCAGAAAGATGTCGTTTTCCATCACTTGGGACGTTACTTGTTCCACCCTACCA
ATGTTGTCTGGGGCTTGATTACAAGGTACTACGATTCTTATCTTGCCAGAGCTGATGAGA
AGTTAGGTATCCAGATCAGAGTCTTCGATACTGAAACCGGTCCATTTCAGCATGTCTTGG
ATCAGGTCCTTGATTGCACACTGAAGGAAAAATTACTACCAGAGATTAACGCACAACAGC
CGATTATCTCGACAGGGAACATCAGGTCCAAAGTTGTTCTGATTACTTCTTTGAACTCAG
GATACTATGAAAGAATCAGGAACATGTATTGGGAACATCCAACAGAGAGTGGTGAGATAA
TTAGCTTCCACCAGCCAAGTCACGAGGAGCATCAGGATTCAGACAAGAAAATGCATAACA
TGAAAGCATTGGCAGAGATTTATCTGTTGAGCTTATCTGATGTTATGGTAACAAGTGCAT
GGTCAACTTTTGGGTATGTAGCTCAAGGTCTGAGTGGTTCGAAGACGTGGCTAATGTTCA
AGCCGGAAAACCGCACTGCGCCTAATCCACCTTGCCGTCAAGTTATGTCTATAGAGCCGT
GCTTTCATGCTCCACCTTTCTACGATTGCAAAACTAGGAAGGGAACTGATACAGGAAAGC
TTGTTCCACATGTAAGACACTGTGAAGATATGAGCTGGGGGCTCAAGCTAGTTGATACGG
GTGTATAGCAGGTTCGAGTTTGTATTTATATTGAAGGCGAGATTTGAGTGATGTAGTTAA
TTATTACGAAATGGCAAGTATGCTGATTGCGGTCAGGTATAAATTTCCTGTATCTCTTAT
ATATAGCATCTGTTCATGCGACTATAGCATGCTTTGAACTGGGGAAAAAATCGACCATGG
AAATGAAAAGTGAGCGAATATACTGAGGGCTATGATCAATCGCAAAGAATGATAAGCTGT
ATTTCCTTGTCTTCCCTCCCCCCTACCATG